RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 KHDC1LQ5JSQ8 128 aa10.24□□□□□ -0.77
SYNGAP1-207ENST00000628646 SMDT1Q9H4I9 107 aa10.24□□□□□ -0.77
SYNGAP1-207ENST00000628646 SOX15O60248 233 aa10.23□□□□□ -0.77
SYNGAP1-207ENST00000628646 LOXP28300 417 aaPredicted RBP10.23□□□□□ -0.77
SYNGAP1-207ENST00000628646 RAB5BP61020 215 aa10.23□□□□□ -0.77
SYNGAP1-207ENST00000628646 RPL19P84098 196 aaKnown RBP10.23□□□□□ -0.77
SYNGAP1-207ENST00000628646 TMEM249Q2WGJ8 235 aa10.23□□□□□ -0.77
SYNGAP1-207ENST00000628646 CORO2AQ92828 525 aa10.23□□□□□ -0.77
SYNGAP1-207ENST00000628646 NPIPB11E5RHQ5 1161 aa10.23□□□□□ -0.77
SYNGAP1-207ENST00000628646 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.23□□□□□ -0.77
SYNGAP1-207ENST00000628646 TMEM50AO95807 157 aa10.23□□□□□ -0.77
SYNGAP1-207ENST00000628646 NHLH2Q02577 135 aa10.23□□□□□ -0.77
SYNGAP1-207ENST00000628646 CHD3Q12873 2000 aaKnown RBP10.23□□□□□ -0.77
SYNGAP1-207ENST00000628646 KIAA1324LA8MWY0 1029 aaPredicted RBP10.23□□□□□ -0.77
SYNGAP1-207ENST00000628646 ZNF737O75373 536 aa10.23□□□□□ -0.77
SYNGAP1-207ENST00000628646 LHBP01229 141 aa10.23□□□□□ -0.77
SYNGAP1-207ENST00000628646 CXorf66Q5JRM2 361 aaPredicted RBP10.23□□□□□ -0.77
SYNGAP1-207ENST00000628646 DPPA3Q6W0C5 159 aa10.23□□□□□ -0.77
SYNGAP1-207ENST00000628646 VMO1Q7Z5L0 202 aa10.23□□□□□ -0.77
SYNGAP1-207ENST00000628646 DRAM1Q8N682 238 aa10.23□□□□□ -0.77
SYNGAP1-207ENST00000628646 TMEM133Q9H2Q1 129 aa10.23□□□□□ -0.77
SYNGAP1-207ENST00000628646 FOSL1P15407 271 aa10.22□□□□□ -0.77
SYNGAP1-207ENST00000628646 SLC38A11Q08AI6 406 aa10.22□□□□□ -0.77
SYNGAP1-207ENST00000628646 CBLN2Q8IUK8 224 aa10.22□□□□□ -0.77
SYNGAP1-207ENST00000628646 SH3BGRL3Q9H299 93 aa10.22□□□□□ -0.77
SYNGAP1-207ENST00000628646 DPM3Q9P2X0 92 aa10.22□□□□□ -0.77
SYNGAP1-207ENST00000628646 NBEAQ8NFP9 2946 aa10.22□□□□□ -0.77
SYNGAP1-207ENST00000628646 THBS3P49746 956 aa10.22□□□□□ -0.77
SYNGAP1-207ENST00000628646 CR1LQ2VPA4 569 aa10.22□□□□□ -0.77
SYNGAP1-207ENST00000628646 R3HDM4Q96D70 268 aa10.22□□□□□ -0.77
SYNGAP1-207ENST00000628646 FHITP49789 147 aa10.22□□□□□ -0.77
SYNGAP1-207ENST00000628646 TMEM88Q6PEY1 159 aa10.22□□□□□ -0.77
SYNGAP1-207ENST00000628646 RFNGQ9Y644 331 aa10.22□□□□□ -0.77
SYNGAP1-207ENST00000628646 SNRNP70P08621 437 aaKnown RBP10.21□□□□□ -0.77
SYNGAP1-207ENST00000628646 FBP1P09467 338 aa10.21□□□□□ -0.77
SYNGAP1-207ENST00000628646 METTL15P1P0C7V9 234 aa10.21□□□□□ -0.77
SYNGAP1-207ENST00000628646 CD99P14209 185 aa10.21□□□□□ -0.77
SYNGAP1-207ENST00000628646 NQO2P16083 231 aa10.21□□□□□ -0.77
SYNGAP1-207ENST00000628646 TMEM147Q9BVK8 224 aa10.21□□□□□ -0.77
SYNGAP1-207ENST00000628646 ACTR3CQ9C0K3 210 aaPredicted RBP10.21□□□□□ -0.77
SYNGAP1-207ENST00000628646 C1orf196B1AJZ1 125 aa10.21□□□□□ -0.77
SYNGAP1-207ENST00000628646 C22orf46C9J442 243 aa10.21□□□□□ -0.77
SYNGAP1-207ENST00000628646 HPRT1P00492 218 aa10.21□□□□□ -0.77
SYNGAP1-207ENST00000628646 AKR1D1P51857 326 aa10.21□□□□□ -0.77
SYNGAP1-207ENST00000628646 NIPSNAP3BQ9BS92 247 aa10.21□□□□□ -0.77
SYNGAP1-207ENST00000628646 HES4Q9HCC6 221 aa10.21□□□□□ -0.77
SYNGAP1-207ENST00000628646 SETD2Q9BYW2 2564 aaPredicted RBP10.21□□□□□ -0.77
SYNGAP1-207ENST00000628646 MAP1AP78559 2803 aaPredicted RBP10.21□□□□□ -0.77
SYNGAP1-207ENST00000628646 IGSF23A1L1A6 192 aa10.21□□□□□ -0.78
SYNGAP1-207ENST00000628646 OR2B8PP59922 312 aa10.21□□□□□ -0.78
SYNGAP1-207ENST00000628646 MMDQ15546 238 aa10.21□□□□□ -0.78
SYNGAP1-207ENST00000628646 ACOT6Q3I5F7 207 aaPredicted RBP10.21□□□□□ -0.78
SYNGAP1-207ENST00000628646 F8P00451 2351 aa10.21□□□□□ -0.78
SYNGAP1-207ENST00000628646 OVOL3O00110 214 aa10.21□□□□□ -0.78
SYNGAP1-207ENST00000628646 IGHV1-8P0DP01 117 aa10.21□□□□□ -0.78
SYNGAP1-207ENST00000628646 ATP6V0CP27449 155 aa10.21□□□□□ -0.78
SYNGAP1-207ENST00000628646 HEPN1Q6WQI6 88 aa10.21□□□□□ -0.78
SYNGAP1-207ENST00000628646 IL17RELQ6ZVW7 336 aa10.21□□□□□ -0.78
SYNGAP1-207ENST00000628646 LRRC75A-AS1Q8N1F1 130 aa10.21□□□□□ -0.78
SYNGAP1-207ENST00000628646 FKBP11Q9NYL4 201 aa10.21□□□□□ -0.78
SYNGAP1-207ENST00000628646 A0A0G2JRQ6 117 aa10.2□□□□□ -0.78
SYNGAP1-207ENST00000628646 PAX9P55771 341 aa10.2□□□□□ -0.78
SYNGAP1-207ENST00000628646 UBE2KP61086 200 aa10.2□□□□□ -0.78
SYNGAP1-207ENST00000628646 HTD2P86397 168 aa10.2□□□□□ -0.78
SYNGAP1-207ENST00000628646 TMEM267Q0VDI3 215 aaPredicted RBP10.2□□□□□ -0.78
SYNGAP1-207ENST00000628646 VMA21Q3ZAQ7 101 aa10.2□□□□□ -0.78
SYNGAP1-207ENST00000628646 FAM122CQ6P4D5 195 aa10.2□□□□□ -0.78
SYNGAP1-207ENST00000628646 KAAG1Q9UBP8 84 aa10.2□□□□□ -0.78
SYNGAP1-207ENST00000628646 PSMB3P49720 205 aa10.2□□□□□ -0.78
SYNGAP1-207ENST00000628646 RAB13P51153 203 aa10.2□□□□□ -0.78
SYNGAP1-207ENST00000628646 SERF2P84101 59 aa10.2□□□□□ -0.78
SYNGAP1-207ENST00000628646 ID3Q02535 119 aa10.2□□□□□ -0.78
SYNGAP1-207ENST00000628646 DTD1Q8TEA8 209 aa10.2□□□□□ -0.78
SYNGAP1-207ENST00000628646 SLC35B3Q9H1N7 401 aa10.2□□□□□ -0.78
SYNGAP1-207ENST00000628646 IGHV2-70DA0A0C4DH43 119 aa10.2□□□□□ -0.78
SYNGAP1-207ENST00000628646 SFTA3P0C7M3 94 aa10.2□□□□□ -0.78
SYNGAP1-207ENST00000628646 RPL39P5Q59GN2 51 aa10.2□□□□□ -0.78
SYNGAP1-207ENST00000628646 SUB1P53999 127 aaKnown RBP eCLIP10.19□□□□□ -0.78
SYNGAP1-207ENST00000628646 ZNF418Q8TF45 676 aaPredicted RBP10.19□□□□□ -0.78
SYNGAP1-207ENST00000628646 HARBI1Q96MB7 349 aa10.19□□□□□ -0.78
SYNGAP1-207ENST00000628646 COMMD5Q9GZQ3 224 aa10.19□□□□□ -0.78
SYNGAP1-207ENST00000628646 PUS1Q9Y606 427 aaKnown RBP eCLIP10.19□□□□□ -0.78
SYNGAP1-207ENST00000628646 CD24P25063 80 aa10.19□□□□□ -0.78
SYNGAP1-207ENST00000628646 S100PP25815 95 aa10.19□□□□□ -0.78
SYNGAP1-207ENST00000628646 FLYWCH2Q96CP2 140 aaKnown RBP10.19□□□□□ -0.78
SYNGAP1-207ENST00000628646 DUX5Q96PT3 197 aa10.19□□□□□ -0.78
SYNGAP1-207ENST00000628646 IGKV1-39P01597 117 aa10.19□□□□□ -0.78
SYNGAP1-207ENST00000628646 IGKV1D-39P04432 117 aa10.19□□□□□ -0.78
SYNGAP1-207ENST00000628646 MBNL3Q9NUK0 354 aaKnown RBP10.19□□□□□ -0.78
SYNGAP1-207ENST00000628646 C1RLQ9NZP8 487 aa10.19□□□□□ -0.78
SYNGAP1-207ENST00000628646 HCFC1P51610 2035 aa10.19□□□□□ -0.78
SYNGAP1-207ENST00000628646 FAM106CPP0CH98 169 aa10.19□□□□□ -0.78
SYNGAP1-207ENST00000628646 ZMAT5Q9UDW3 170 aaKnown RBP10.19□□□□□ -0.78
SYNGAP1-207ENST00000628646 IGHV2-26A0A0B4J1V2 119 aa10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 FGF7P21781 194 aa10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 G6PCP35575 357 aa10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 ELLP55199 621 aaPredicted RBP10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 ERHP84090 104 aaKnown RBP10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 ETV3LQ6ZN32 361 aa10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 OR5B12Q96R08 314 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms