RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 IGHV3OR16-8A0A075B7F1 116 aa10.8□□□□□ -0.68
PNKP-218ENST00000625299 IGLL5B9A064 214 aa10.8□□□□□ -0.68
PNKP-218ENST00000625299 MFNGO00587 321 aa10.8□□□□□ -0.68
PNKP-218ENST00000625299 DEFB4AO15263 64 aa10.8□□□□□ -0.68
PNKP-218ENST00000625299 ZNF207O43670 478 aaKnown RBP10.8□□□□□ -0.68
PNKP-218ENST00000625299 ARL6IP5O75915 188 aa10.8□□□□□ -0.68
PNKP-218ENST00000625299 HIST1H1DP16402 221 aaKnown RBP10.8□□□□□ -0.68
PNKP-218ENST00000625299 HLA-GP17693 338 aa10.8□□□□□ -0.68
PNKP-218ENST00000625299 CALRP27797 417 aaKnown RBP10.8□□□□□ -0.68
PNKP-218ENST00000625299 TMEM91Q6ZNR0 172 aa10.8□□□□□ -0.68
PNKP-218ENST00000625299 OR11H2Q8NH07 326 aa10.8□□□□□ -0.68
PNKP-218ENST00000625299 C20orf24Q9BUV8 137 aa10.8□□□□□ -0.68
PNKP-218ENST00000625299 ZNF436Q9C0F3 470 aaPredicted RBP10.8□□□□□ -0.68
PNKP-218ENST00000625299 CSTL1Q9H114 145 aa10.8□□□□□ -0.68
PNKP-218ENST00000625299 DAZ1Q9NQZ3 744 aaKnown RBP10.8□□□□□ -0.68
PNKP-218ENST00000625299 TAS2R8Q9NYW2 309 aa10.8□□□□□ -0.68
PNKP-218ENST00000625299 FAT2Q9NYQ8 4349 aa10.8□□□□□ -0.68
PNKP-218ENST00000625299 DNAH2Q9P225 4427 aa10.79□□□□□ -0.68
PNKP-218ENST00000625299 OR2T8A6NH00 312 aa10.79□□□□□ -0.68
PNKP-218ENST00000625299 MPTX1A8MV57 137 aa10.79□□□□□ -0.68
PNKP-218ENST00000625299 PTGES3LE9PB15 166 aa10.79□□□□□ -0.68
PNKP-218ENST00000625299 TGOLN2O43493 480 aa10.79□□□□□ -0.68
PNKP-218ENST00000625299 CTSDP07339 412 aaPredicted RBP10.79□□□□□ -0.68
PNKP-218ENST00000625299 HSMCR30P0CW71 290 aa10.79□□□□□ -0.68
PNKP-218ENST00000625299 CENPOQ9BU64 300 aa10.79□□□□□ -0.68
PNKP-218ENST00000625299 HRASLSQ9HDD0 168 aa10.79□□□□□ -0.68
PNKP-218ENST00000625299 FKBP14Q9NWM8 211 aa10.79□□□□□ -0.68
PNKP-218ENST00000625299 LSM2Q9Y333 95 aaKnown RBP10.79□□□□□ -0.68
PNKP-218ENST00000625299 OR2W1Q9Y3N9 320 aa10.79□□□□□ -0.68
PNKP-218ENST00000625299 V9GY05 133 aa10.79□□□□□ -0.68
PNKP-218ENST00000625299 ABCA13Q86UQ4 5058 aa10.79□□□□□ -0.68
PNKP-218ENST00000625299 IGKV1D-13A0A0B4J2D9 117 aa10.78□□□□□ -0.68
PNKP-218ENST00000625299 CGB1A6NKQ9 187 aa10.78□□□□□ -0.68
PNKP-218ENST00000625299 HRASP01112 189 aa10.78□□□□□ -0.68
PNKP-218ENST00000625299 IGLV2-14P01704 120 aa10.78□□□□□ -0.68
PNKP-218ENST00000625299 IGKV1-13P0DP09 117 aa10.78□□□□□ -0.68
PNKP-218ENST00000625299 TFPI2P48307 235 aa10.78□□□□□ -0.68
PNKP-218ENST00000625299 TCTAP57738 103 aa10.78□□□□□ -0.68
PNKP-218ENST00000625299 KLK9Q2XQG4 91 aa10.78□□□□□ -0.68
PNKP-218ENST00000625299 GPHA2Q96T91 129 aa10.78□□□□□ -0.68
PNKP-218ENST00000625299 HSD17B10Q99714 261 aaKnown RBP10.78□□□□□ -0.68
PNKP-218ENST00000625299 C11orf68Q9H3H3 251 aaKnown RBP10.78□□□□□ -0.68
PNKP-218ENST00000625299 THYN1Q9P016 225 aa10.78□□□□□ -0.68
PNKP-218ENST00000625299 KLK9Q9UKQ9 250 aa10.78□□□□□ -0.68
PNKP-218ENST00000625299 ELF5Q9UKW6 265 aaPredicted RBP10.78□□□□□ -0.68
PNKP-218ENST00000625299 MUC4Q99102 2169 aa10.77□□□□□ -0.68
PNKP-218ENST00000625299 IGKV3-7A0A075B6H7 116 aa10.77□□□□□ -0.69
PNKP-218ENST00000625299 TNFSF12O43508 249 aa10.77□□□□□ -0.69
PNKP-218ENST00000625299 SLC22A5O76082 557 aa10.77□□□□□ -0.69
PNKP-218ENST00000625299 HLA-DQB1P01920 261 aa10.77□□□□□ -0.69
PNKP-218ENST00000625299 PTBP1P26599 531 aaKnown RBP eCLIP10.77□□□□□ -0.69
PNKP-218ENST00000625299 RANBP1P43487 201 aa10.77□□□□□ -0.69
PNKP-218ENST00000625299 MFAP2P55001 183 aa10.77□□□□□ -0.69
PNKP-218ENST00000625299 Q6ZS49 121 aa10.77□□□□□ -0.69
PNKP-218ENST00000625299 LINC00336Q6ZUF6 198 aa10.77□□□□□ -0.69
PNKP-218ENST00000625299 PACRGLQ8N7B6 248 aa10.77□□□□□ -0.69
PNKP-218ENST00000625299 OR4A5Q8NH83 315 aa10.77□□□□□ -0.69
PNKP-218ENST00000625299 APLNQ9ULZ1 77 aa10.77□□□□□ -0.69
PNKP-218ENST00000625299 IGHV3-21A0A0B4J1V1 117 aa10.76□□□□□ -0.69
PNKP-218ENST00000625299 IGLC7A0M8Q6 106 aa10.76□□□□□ -0.69
PNKP-218ENST00000625299 CA1P00915 261 aaPredicted RBP10.76□□□□□ -0.69
PNKP-218ENST00000625299 MED14OSP0DP75 135 aa10.76□□□□□ -0.69
PNKP-218ENST00000625299 BRWD1-AS2P59051 145 aa10.76□□□□□ -0.69
PNKP-218ENST00000625299 OR2B8PP59922 312 aa10.76□□□□□ -0.69
PNKP-218ENST00000625299 TIMM50Q3ZCQ8 353 aa10.76□□□□□ -0.69
PNKP-218ENST00000625299 MFSD4AQ8N468 514 aa10.76□□□□□ -0.69
PNKP-218ENST00000625299 UBAC2Q8NBM4 344 aa10.76□□□□□ -0.69
PNKP-218ENST00000625299 ERICH4A6NGS2 130 aa10.75□□□□□ -0.69
PNKP-218ENST00000625299 NDUFA4O00483 81 aa10.75□□□□□ -0.69
PNKP-218ENST00000625299 CTXN2P0C2S0 81 aa10.75□□□□□ -0.69
PNKP-218ENST00000625299 DTYMKP23919 212 aa10.75□□□□□ -0.69
PNKP-218ENST00000625299 OR10A3P58181 314 aa10.75□□□□□ -0.69
PNKP-218ENST00000625299 FABP5Q01469 135 aa10.75□□□□□ -0.69
PNKP-218ENST00000625299 TRAM1Q15629 374 aa10.75□□□□□ -0.69
PNKP-218ENST00000625299 GVQW1Q8N7I0 195 aa10.75□□□□□ -0.69
PNKP-218ENST00000625299 VN1R17PQ8TDU5 208 aa10.75□□□□□ -0.69
PNKP-218ENST00000625299 BSCL2Q96G97 398 aaPredicted RBP10.75□□□□□ -0.69
PNKP-218ENST00000625299 COMMD5Q9GZQ3 224 aa10.75□□□□□ -0.69
PNKP-218ENST00000625299 ATG5Q9H1Y0 275 aa10.75□□□□□ -0.69
PNKP-218ENST00000625299 C8orf4Q9NR00 106 aa10.75□□□□□ -0.69
PNKP-218ENST00000625299 BET1LQ9NYM9 111 aa10.75□□□□□ -0.69
PNKP-218ENST00000625299 DYNC1H1Q14204 4646 aaKnown RBP10.75□□□□□ -0.69
PNKP-218ENST00000625299 IGHV3-49A0A0A0MS15 119 aa10.74□□□□□ -0.69
PNKP-218ENST00000625299 TRAV3A0A0B4J244 114 aa10.74□□□□□ -0.69
PNKP-218ENST00000625299 A0A1B0GVY2 172 aa10.74□□□□□ -0.69
PNKP-218ENST00000625299 METTL21EPA6NDL7 271 aa10.74□□□□□ -0.69
PNKP-218ENST00000625299 CYB5BO43169 146 aa10.74□□□□□ -0.69
PNKP-218ENST00000625299 PSMA1P25786 263 aaKnown RBP10.74□□□□□ -0.69
PNKP-218ENST00000625299 EIF4EBP1Q13541 118 aaPredicted RBP10.74□□□□□ -0.69
PNKP-218ENST00000625299 SSX1Q16384 188 aa10.74□□□□□ -0.69
PNKP-218ENST00000625299 SLC25A24Q6NUK1 477 aa10.74□□□□□ -0.69
PNKP-218ENST00000625299 ZNF66Q6ZN08 573 aa10.74□□□□□ -0.69
PNKP-218ENST00000625299 OR10W1Q8NGF6 305 aa10.74□□□□□ -0.69
PNKP-218ENST00000625299 RNF2Q99496 336 aa10.74□□□□□ -0.69
PNKP-218ENST00000625299 CHRDL1Q9BU40 450 aa10.74□□□□□ -0.69
PNKP-218ENST00000625299 DNAH17Q9UFH2 4485 aa10.74□□□□□ -0.69
PNKP-218ENST00000625299 C11orf94C9JXX5 98 aa10.73□□□□□ -0.69
PNKP-218ENST00000625299 RAB6AP20340 208 aa10.73□□□□□ -0.69
PNKP-218ENST00000625299 TMEM187Q14656 261 aa10.73□□□□□ -0.69
PNKP-218ENST00000625299 Q56UQ5 140 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms