RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 GTSF1Q8WW33 167 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 ADAT3Q96EY9 351 aaPredicted RBP2.12□□□□□ -2.07
CDKL5-208ENST00000624953 PELI1Q96FA3 418 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 MBOAT4Q96T53 435 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 APOL4Q9BPW4 351 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 FAM103A1Q9BTL3 118 aaKnown RBP2.12□□□□□ -2.07
CDKL5-208ENST00000624953 CHRDL1Q9BU40 450 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 FUNDC2Q9BWH2 189 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 TSSK6Q9BXA6 273 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 ANKRD60Q9BZ19 345 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 NDEL1Q9GZM8 345 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 CHST5Q9GZS9 411 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 FAM192AQ9GZU8 254 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 PARP12Q9H0J9 701 aaKnown RBP2.12□□□□□ -2.07
CDKL5-208ENST00000624953 OR51V1Q9H2C8 321 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 TMBIM4Q9HC24 238 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 PARP11Q9NR21 331 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 IDI2-AS1Q9NZ38 188 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 DHRS4-AS1Q9P1J3 65 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 ENPP5Q9UJA9 477 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 APLNQ9ULZ1 77 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 GSTK1Q9Y2Q3 226 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 CSDC2Q9Y534 153 aaKnown RBP2.12□□□□□ -2.07
CDKL5-208ENST00000624953 NUBP2Q9Y5Y2 271 aa2.12□□□□□ -2.07
CDKL5-208ENST00000624953 PKHD1L1Q86WI1 4243 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 TRAV25A0A0B4J276 109 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 TEX48A0A1B0GUV7 120 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 SNTNA6NMZ2 147 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 DHRS7CA6NNS2 312 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 BBIP1A8MTZ0 92 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 M0R129 80 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 ARPC1BO15143 372 aaKnown RBP2.11□□□□□ -2.07
CDKL5-208ENST00000624953 EDF1O60869 148 aaKnown RBP2.11□□□□□ -2.07
CDKL5-208ENST00000624953 ZNF254O75437 659 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 S1PR2O95136 353 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 CST1P01037 141 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 HSPB1P04792 205 aaKnown RBP2.11□□□□□ -2.07
CDKL5-208ENST00000624953 CRYGBP07316 175 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 MRPL3P09001 348 aaKnown RBP2.11□□□□□ -2.07
CDKL5-208ENST00000624953 CTRB1P17538 263 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 MAGEA2P43356 314 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 ARHGDIBP52566 201 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 SYNJ2BPP57105 145 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 ACTBP60709 375 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 CDC42P60953 191 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 ZNF45Q02386 682 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 PAX5Q02548 391 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 RAB40BQ12829 278 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 GK3PQ14409 553 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 C5orf64Q2M2E5 130 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 KRTAP13-3Q3SY46 172 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 CT45A1Q5HYN5 189 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 SPIN3Q5JUX0 258 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 TMEM236Q5W0B7 351 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 CTRB2Q6GPI1 263 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 GLYATQ6IB77 296 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 DEGS2Q6QHC5 323 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 SLC25A48Q6ZT89 311 aaKnown RBP2.11□□□□□ -2.07
CDKL5-208ENST00000624953 CYP4Z1Q86W10 505 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.11□□□□□ -2.07
CDKL5-208ENST00000624953 RDH10Q8IZV5 341 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 LINC00311Q8N616 119 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 YIPF7Q8N8F6 280 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 BEST4Q8NFU0 473 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 NPBQ8NG41 125 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 OR2T33Q8NG76 320 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 OR52L1Q8NGH7 329 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 OR4D6Q8NGJ1 314 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 OR51A4Q8NGJ6 313 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 OR5D18Q8NGL1 313 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 OR9G4Q8NGQ1 327 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 OR10AC1Q8NH08 325 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 CT45A3Q8NHU0 189 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 SUN5Q8TC36 379 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 HAVCR2Q8TDQ0 301 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 CREB3L1Q96BA8 519 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 OR4C12Q96R67 309 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 SH3GL1Q99961 368 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 RASL11BQ9BPW5 248 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 SCRT1Q9BWW7 348 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 GEMIN7Q9H840 131 aaKnown RBP2.11□□□□□ -2.07
CDKL5-208ENST00000624953 TUBA4BQ9H853 241 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 AMBNQ9NP70 447 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 EXOSC4Q9NPD3 245 aaKnown RBP2.11□□□□□ -2.07
CDKL5-208ENST00000624953 ZC4H2Q9NQZ6 224 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 MRM2Q9UI43 246 aaKnown RBP2.11□□□□□ -2.07
CDKL5-208ENST00000624953 OR52A1Q9UKL2 312 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 TBC1D24Q9ULP9 559 aa2.11□□□□□ -2.07
CDKL5-208ENST00000624953 AMMECR1Q9Y4X0 333 aaPredicted RBP2.11□□□□□ -2.07
CDKL5-208ENST00000624953 LRP1Q07954 4544 aaKnown RBP2.1□□□□□ -2.07
CDKL5-208ENST00000624953 MEIKINA0A087WXM9 373 aa2.1□□□□□ -2.07
CDKL5-208ENST00000624953 A0A0G2JND7 137 aa2.1□□□□□ -2.07
CDKL5-208ENST00000624953 RIIAD1A6NNX1 92 aa2.1□□□□□ -2.07
CDKL5-208ENST00000624953 OR11H12B2RN74 326 aa2.1□□□□□ -2.07
CDKL5-208ENST00000624953 LOC110117498-PIK3R3F6TDL0 507 aa2.1□□□□□ -2.07
CDKL5-208ENST00000624953 H0YJX3 145 aa2.1□□□□□ -2.07
CDKL5-208ENST00000624953 SH2D1BO14796 132 aa2.1□□□□□ -2.07
CDKL5-208ENST00000624953 OR5H8P0DN80 308 aa2.1□□□□□ -2.07
CDKL5-208ENST00000624953 COX4I1P13073 169 aa2.1□□□□□ -2.07
CDKL5-208ENST00000624953 ZNF3P17036 446 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms