RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 IFI6P09912 130 aa6.65□□□□□ -1.34
VPS11-209ENST00000622309 SLC25A6P12236 298 aa6.65□□□□□ -1.34
VPS11-209ENST00000622309 PVRP15151 417 aa6.65□□□□□ -1.34
VPS11-209ENST00000622309 TCL1AP56279 114 aa6.65□□□□□ -1.34
VPS11-209ENST00000622309 ZNF295-AS1Q8N0V1 137 aa6.65□□□□□ -1.34
VPS11-209ENST00000622309 PPDPFQ9H3Y8 114 aa6.65□□□□□ -1.34
VPS11-209ENST00000622309 ZNF331Q9NQX6 463 aaPredicted RBP6.65□□□□□ -1.34
VPS11-209ENST00000622309 PHPT1Q9NRX4 125 aaPredicted RBP6.65□□□□□ -1.34
VPS11-209ENST00000622309 MRPL16Q9NX20 251 aaKnown RBP6.65□□□□□ -1.34
VPS11-209ENST00000622309 VPS13AQ96RL7 3174 aa6.65□□□□□ -1.34
VPS11-209ENST00000622309 DIDO1Q9BTC0 2240 aaKnown RBP6.65□□□□□ -1.34
VPS11-209ENST00000622309 WDR87Q6ZQQ6 2873 aa6.65□□□□□ -1.34
VPS11-209ENST00000622309 IGKV1D-43A0A0B4J1Z2 117 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 C2orf70A6NJV1 201 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 B5MCH6 92 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 H0YIG0 161 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 DAP3P51398 398 aaKnown RBP6.65□□□□□ -1.35
VPS11-209ENST00000622309 CX3CL1P78423 397 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 ZDHHC23Q8IYP9 409 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 C18orf32Q8TCD1 76 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 SSC4DQ8WTU2 575 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 CLDN23Q96B33 292 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 ZNF524Q96C55 264 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 A0A0G2JRQ6 117 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 SCO2A0A1W2PP80 73 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 C5orf67F2Z3F1 127 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 FOXS1O43638 330 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 TSPAN13O95857 204 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 DEFA4P12838 97 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 IGFBP2P18065 325 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 PTGDSP41222 190 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 MALLQ13021 153 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 C16orf52Q8NHV5 167 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 RDH5Q92781 318 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 COX14Q96I36 57 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 SCRT2Q9NQ03 307 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 CCL28Q9NRJ3 127 aa6.65□□□□□ -1.35
VPS11-209ENST00000622309 H0Y8X5 98 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.64□□□□□ -1.35
VPS11-209ENST00000622309 IGHMP01871 453 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 CD38P28907 300 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 C3orf36Q3SXR2 165 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 OR51H1Q8NH63 302 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 PMCHL2Q9BQD1 86 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 TXNDC17Q9BRA2 123 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 TMEM147Q9BVK8 224 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 TRAPPC2LQ9UL33 140 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 ZNF257Q9Y2Q1 563 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 KIAA1549LQ6ZVL6 1849 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 TMED7-TICAM2A0A0A6YYA0 188 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 NEURL1O76050 574 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 PSG7Q13046 419 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 DEFB110Q30KQ9 67 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 DHRS13Q6UX07 377 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 ADAMTSL4Q6UY14 1074 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 PRR22Q8IZ63 422 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 CA13Q8N1Q1 262 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 CCL4L1Q8NHW4 92 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 MS4A6AQ9H2W1 248 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 HES4Q9HCC6 221 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 MED29Q9NX70 200 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 PILRAQ9UKJ1 303 aa6.64□□□□□ -1.35
VPS11-209ENST00000622309 A0A1W2PPM0 123 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 NBL1P41271 181 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 REG1BP48304 166 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 KIR3DS1Q14943 382 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 OR8B8Q15620 311 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 ADAMTSL5Q6ZMM2 481 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 PP6455Q8WZ26 134 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 NRGNQ92686 78 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 TSACCQ96A04 125 aaPredicted RBP6.63□□□□□ -1.35
VPS11-209ENST00000622309 TM4SF19Q96DZ7 209 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 SPATA25Q9BR10 227 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 SAP30LQ9HAJ7 183 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 BOKQ9UMX3 212 aaPredicted RBP6.63□□□□□ -1.35
VPS11-209ENST00000622309 PIGLQ9Y2B2 252 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 HILPDAQ9Y5L2 63 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 TMEM189A5PLL7 270 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 DUX1O43812 170 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 CA1P00915 261 aaPredicted RBP6.63□□□□□ -1.35
VPS11-209ENST00000622309 CGAP01215 116 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 CCL1P22362 96 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 SEC61GP60059 68 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 FUT7Q11130 342 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 FNDC7Q5VTL7 733 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 KIR3DL3Q8N743 410 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 STPG3Q8N7X2 389 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 FAM131CQ96AQ9 280 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 DUX5Q96PT3 197 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 EMC6Q9BV81 110 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 C19orf24Q9BVV8 132 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 SERTAD4Q9NUC0 356 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 PSG8Q9UQ74 426 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 H3BMH7 237 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 SYS1-DBNDD2H3BUS1 97 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 K7EN84 100 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 HBZP02008 142 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 FAM87AP0C7U9 286 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 TMEM52BQ4KMG9 183 aa6.63□□□□□ -1.35
VPS11-209ENST00000622309 TPRX1Q8N7U7 411 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms