RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ARSJQ5FYB0 599 aaPredicted RBP7.73□□□□□ -1.17
PDPN-212ENST00000621990 SPNS3Q6ZMD2 512 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 SSX8Q7RTT4 187 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 LYG1Q8N1E2 194 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 SLC24A4Q8NFF2 622 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 FRZBQ92765 325 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 ANAPC16Q96DE5 110 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 SRD5A3Q9H8P0 318 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 NPVFQ9HCQ7 196 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 LINC00312Q9Y6C7 94 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 PXMP4Q9Y6I8 212 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 MMP23AO75900 390 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 TRGC1P0CF51 173 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 CT45A6P0DMU7 189 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 CT45A5P0DMU8 189 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 CT45A7P0DMV0 189 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 CD99P14209 185 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 NPY1RP25929 384 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 MEF2CQ06413 473 aaPredicted RBP7.72□□□□□ -1.17
PDPN-212ENST00000621990 ADIPOQQ15848 244 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 OR51M1Q9H341 326 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 GSN-AS1Q9NRJ2 163 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 PRNDQ9UKY0 176 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 A0A1W2PPV4 95 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 hADV38S2A0JD32 116 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 C17orf100A8MU93 164 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 F6UZH7 168 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 MKRN2OSH3BPM6 223 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 IRF2P14316 349 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 TNFRSF1AP19438 455 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 ZNF833PQ6ZTB9 187 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 HIST3H2BBQ8N257 126 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 NEUROG1Q92886 237 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 NIT2Q9NQR4 276 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 DPRXA6NFQ7 191 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 H7BYZ3 331 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 PRRG2O14669 202 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 CXorf1O96002 111 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 THBDP07204 575 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 RPL29P47914 159 aaKnown RBP7.72□□□□□ -1.17
PDPN-212ENST00000621990 ATP5IP56385 69 aaPredicted RBP7.72□□□□□ -1.17
PDPN-212ENST00000621990 GNB1P62873 340 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 PRCDQ00LT1 54 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 TEPPQ6URK8 271 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 LINC01551Q86U37 167 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 DEFB108BQ8NET1 73 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 PATZ1Q9HBE1 687 aaKnown RBP7.72□□□□□ -1.17
PDPN-212ENST00000621990 DCAF16Q9NXF7 216 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 GAR1Q9NY12 217 aaKnown RBP7.72□□□□□ -1.17
PDPN-212ENST00000621990 ZNF835Q9Y2P0 537 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 OR51B2Q9Y5P1 312 aa7.72□□□□□ -1.17
PDPN-212ENST00000621990 NKX6-3A6NJ46 265 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 UPK2O00526 184 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 GGCTO75223 188 aaKnown RBP7.71□□□□□ -1.18
PDPN-212ENST00000621990 CA2P00918 260 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 FABP1P07148 127 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 OR4A8P0C604 315 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 ARL14EPLP0DKL9 152 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 SRP14P37108 136 aaKnown RBP7.71□□□□□ -1.18
PDPN-212ENST00000621990 GALR1P47211 349 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 ATP5G3P48201 142 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 PRR20EP86478 221 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 PRR20CP86479 221 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 PRR20DP86480 221 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 PRR20BP86481 221 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 PRR20AP86496 221 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 MIC13Q5XKP0 118 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 Q8NA96 180 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 KALRNO60229 2985 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 DMXL2Q8TDJ6 3036 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 TNFRSF13BO14836 293 aaPredicted RBP7.71□□□□□ -1.18
PDPN-212ENST00000621990 PPP1R2P9O14990 202 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 FCN3O75636 299 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 IGKV1-16P04430 117 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 TYMSP04818 313 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 SOD3P08294 240 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 S100PP25815 95 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 GNG10P50151 68 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 RTL8BQ17RB0 113 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 SNRNP40Q96DI7 357 aaKnown RBP7.71□□□□□ -1.18
PDPN-212ENST00000621990 TMUB1Q9BVT8 246 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 GAL3ST2Q9H3Q3 398 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 BET1LQ9NYM9 111 aa7.71□□□□□ -1.18
PDPN-212ENST00000621990 CCL8P80075 99 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 BSPH1Q075Z2 132 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 EFNB3Q15768 340 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 STPG3Q8N7X2 389 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 C8orf31Q8N9H6 132 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 OR4X1Q8NH49 305 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 ZNF596Q8TC21 504 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 ABHD17AQ96GS6 310 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 OR5B12Q96R08 314 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 IMMP2LQ96T52 175 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 CHODLQ9H9P2 273 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 ENY2Q9NPA8 101 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 SLC25A10Q9UBX3 287 aaPredicted RBP7.7□□□□□ -1.18
PDPN-212ENST00000621990 ADGRG4Q8IZF6 3080 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 SRRM4A7MD48 611 aaKnown RBP7.7□□□□□ -1.18
PDPN-212ENST00000621990 IGHV2-70P01814 119 aa7.7□□□□□ -1.18
PDPN-212ENST00000621990 S100A2P29034 98 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms