RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 GREB1Q4ZG55 1949 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 HEATR1Q9H583 2144 aaKnown RBP6.24□□□□□ -1.41
PDE6A-205ENST00000617647 HELZP42694 1942 aaKnown RBP6.24□□□□□ -1.41
PDE6A-205ENST00000617647 TRGV10A0A0A0MS01 117 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 LOC389332A0A1B0GUA5 103 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 H0YJW9 148 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 REG1AP05451 166 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 WFDC2Q14508 124 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 OR8B8Q15620 311 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 VSTM2LQ96N03 204 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 VCX2Q9H322 139 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 TNFRSF19Q9NS68 423 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 OR2W1Q9Y3N9 320 aa6.24□□□□□ -1.41
PDE6A-205ENST00000617647 MLNRO43193 412 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 ENSAO43768 121 aaKnown RBP6.23□□□□□ -1.41
PDE6A-205ENST00000617647 CEACAM5P06731 702 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 C8orf86Q6ZUL3 223 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 BCL6BQ8N143 479 aaPredicted RBP6.23□□□□□ -1.41
PDE6A-205ENST00000617647 STRADBQ9C0K7 418 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 IL36GQ9NZH8 169 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 WNT16Q9UBV4 365 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 PHF3Q92576 2039 aaKnown RBP6.23□□□□□ -1.41
PDE6A-205ENST00000617647 PLXNA3P51805 1871 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 TRBV20-1A0A075B6N2 111 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 LRRC30A6NM36 301 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 GCHFRP30047 84 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 PPIFP30405 207 aaKnown RBP6.23□□□□□ -1.41
PDE6A-205ENST00000617647 EMP1P54849 157 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 HHEXQ03014 270 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 NRN1LQ496H8 165 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 FHL5Q5TD97 284 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 SPATA31B1PQ5VZV4 182 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 OR10X1Q8NGY0 326 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 DEPPQ9NTK1 212 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 ANAPC10Q9UM13 185 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 PATJQ8NI35 1801 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 ABCA7Q8IZY2 2146 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 IGKV1-9A0A0C4DH69 117 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 A8MWL6 223 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 F8W1H4 67 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 H3BMG7 143 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 PRSS1P07477 247 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 IL11P20809 199 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 NMSQ5H8A3 153 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 NT5CQ8TCD5 201 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 VGLL1Q99990 258 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 TM2D1Q9BX74 207 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 C1QTNF4Q9BXJ3 329 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 TMEM167BQ9NRX6 74 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 ESPL1Q14674 2120 aa6.23□□□□□ -1.41
PDE6A-205ENST00000617647 SAA2-SAA4A0A096LPE2 208 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 CA3P07451 260 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 CYB561P49447 251 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 PAX9P55771 341 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 RSPO4Q2I0M5 234 aaPredicted RBP6.22□□□□□ -1.41
PDE6A-205ENST00000617647 ADAMTSL4Q6UY14 1074 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 SPATA12Q7Z6I5 190 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 TSACCQ96A04 125 aaPredicted RBP6.22□□□□□ -1.41
PDE6A-205ENST00000617647 HIST1H4GQ99525 98 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 GGTLC1Q9BX51 225 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 INSIG2Q9Y5U4 225 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 ATG2BQ96BY7 2078 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 A0A1W2PP55 124 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 NPIPB5A8MRT5 1133 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 ZG16O60844 167 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 COX8AP10176 69 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 FCGR2BP31994 310 aaPredicted RBP6.22□□□□□ -1.41
PDE6A-205ENST00000617647 KIR2DL2P43627 348 aaPredicted RBP6.22□□□□□ -1.41
PDE6A-205ENST00000617647 SRSF6Q13247 344 aaKnown RBP6.22□□□□□ -1.41
PDE6A-205ENST00000617647 VWC2Q2TAL6 325 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 AMTNQ6UX39 209 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 Q6ZNB5 142 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 CENPVQ7Z7K6 275 aaPredicted RBP6.22□□□□□ -1.41
PDE6A-205ENST00000617647 ZADH2Q8N4Q0 377 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 ZNF611Q8N823 705 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 PGLYRP4Q96LB8 373 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 C1QTNF5Q9BXJ0 243 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 OBP2BQ9NPH6 170 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 AP5S1Q9NUS5 200 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 OBP2AQ9NY56 170 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 CCL26Q9Y258 94 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 LHFPL6Q9Y693 200 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 IGKV1D-13A0A0B4J2D9 117 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 A0A1W2PNR3 127 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 SHISA8B8ZZ34 492 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 CGAP01215 116 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 CT45A10P0DMU9 189 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 IGKV1-13P0DP09 117 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 NPPCP23582 126 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 PSMB2P49721 201 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 LINC00310P59036 64 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 RBMXL3Q8N7X1 1067 aaKnown RBP6.22□□□□□ -1.41
PDE6A-205ENST00000617647 OR5AN1Q8NGI8 311 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 OR9G4Q8NGQ1 327 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 ZNF296Q8WUU4 475 aaPredicted RBP6.22□□□□□ -1.41
PDE6A-205ENST00000617647 JMJD8Q96S16 334 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 HSD17B10Q99714 261 aaKnown RBP6.22□□□□□ -1.41
PDE6A-205ENST00000617647 IGKV1D-43A0A0B4J1Z2 117 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 TMEM189A5PLL7 270 aa6.22□□□□□ -1.41
PDE6A-205ENST00000617647 OR9G9P0C7N8 305 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms