RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 ADMP35318 185 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 SAMD13Q5VXD3 122 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 LINC00305Q7Z4B0 112 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 MRPL16Q9NX20 251 aaKnown RBP9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 TRBV20OR9-2A0A075B6H5 130 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 STAG3L3P0CL85 134 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 CCL20P78556 96 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 WFDC3Q8IUB2 231 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 METTL26Q96S19 204 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 SRXN1Q9BYN0 137 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 JKAMPQ9P055 326 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 QSER1Q2KHR3 1735 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 AMBPP02760 352 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 GPR183P32249 361 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 TCF23Q7RTU1 214 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 FAM117AQ9C073 453 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 COL4A1P02462 1669 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 ADAMTSL1Q8N6G6 1762 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 C12orf77C9JDV5 145 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 C1QTNF9P0C862 333 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 SYT8Q8NBV8 401 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 LEAP2Q969E1 77 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 IFI27L2Q9H2X8 130 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 ESPL1Q14674 2120 aa9.04□□□□□ -0.96
CLTCL1-209ENST00000617103 TRBV6-7A0A0A0MS04 114 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 PROB1E7EW31 1015 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 ATXN7O15265 892 aaPredicted RBP9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 IGFBP2P18065 325 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 NUTF2P61970 127 aaKnown RBP9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 ID3Q02535 119 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 RELQ04864 619 aaPredicted RBP9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 FAM169BQ8N8A8 192 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 C18orf15Q96N68 181 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 GFI1Q99684 422 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 H3BUT2 72 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 ATP5LO75964 103 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 LOXL3P58215 753 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 CIRBPQ14011 172 aaKnown RBP9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 TRIP6Q15654 476 aaKnown RBP9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 GFI1BQ5VTD9 330 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 TMEM186Q96B77 213 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 HS3ST3B1Q9Y662 390 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 A0A1B0GW15 77 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 C17orf98A8MV24 154 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 CXCL1P09341 107 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 MEF2CQ06413 473 aaPredicted RBP9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 ACSF3Q4G176 576 aaPredicted RBP9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 C1orf210Q8IVY1 113 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 BEND2Q8NDZ0 799 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 RPP21Q9H633 154 aaKnown RBP9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 CGB1A6NKQ9 187 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 TNFSF13O75888 250 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 IGHV3-48P01763 117 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 RAB9AP51151 201 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 DLX6P56179 175 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 LDLRAD2Q5SZI1 272 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 MBD3L1Q8WWY6 194 aa9.03□□□□□ -0.96
CLTCL1-209ENST00000617103 A0A1W2PS18 150 aa9.02□□□□□ -0.96
CLTCL1-209ENST00000617103 IFNL4K9M1U5 179 aa9.02□□□□□ -0.96
CLTCL1-209ENST00000617103 LURAP1LQ8IV03 231 aa9.02□□□□□ -0.96
CLTCL1-209ENST00000617103 FAM89BQ8N5H3 189 aa9.02□□□□□ -0.96
CLTCL1-209ENST00000617103 COPS9Q8WXC6 57 aa9.02□□□□□ -0.96
CLTCL1-209ENST00000617103 EAF1Q96JC9 268 aaPredicted RBP9.02□□□□□ -0.96
CLTCL1-209ENST00000617103 CYTL1Q9NRR1 136 aa9.02□□□□□ -0.96
CLTCL1-209ENST00000617103 HILPDAQ9Y5L2 63 aa9.02□□□□□ -0.96
CLTCL1-209ENST00000617103 HEATR5BQ9P2D3 2071 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 A0A1W2PRS3 328 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 SYNGR3O43761 229 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 SS18L1O75177 396 aaPredicted RBP9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 REG1AP05451 166 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 PRSS8Q16651 343 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 TM4SF20Q53R12 229 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 C19orf54Q5BKX5 351 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 PYY3Q5JQD4 70 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 PAPPA-AS1Q5QFB9 102 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 DEFB124Q8NES8 71 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 OR9G1Q8NH87 305 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 SP7Q8TDD2 431 aaPredicted RBP9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 KIR2DL4Q99706 377 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 AICDAQ9GZX7 198 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 PRR32B1ATL7 298 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 DLEU1O43261 78 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 NDUFA2O43678 99 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 CA1P00915 261 aaPredicted RBP9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 GPR6P46095 362 aaPredicted RBP9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 Q6AWC8 147 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 DNM1P46Q6ZS02 220 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 DEFB123Q8N688 67 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 GPR82Q96P67 336 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 MEGF9Q9H1U4 602 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 VCX2Q9H322 139 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 WFDC1Q9HC57 220 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 A0A087WV48 116 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 CDX4O14627 284 aaPredicted RBP9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 MOSP00540 346 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 TFPI2P48307 235 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 PAQR4Q8N4S7 273 aaPredicted RBP9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 ZNF441Q8N8Z8 693 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 LINC00470Q9BZP3 86 aa9.02□□□□□ -0.97
CLTCL1-209ENST00000617103 OSTCQ9NRP0 149 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms