RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 DUS4LO95620 317 aaKnown RBP11.71□□□□□ -0.53
UBXN1-218ENST00000616865 CDS2O95674 445 aa11.71□□□□□ -0.53
UBXN1-218ENST00000616865 IGLV2-23P01705 113 aa11.71□□□□□ -0.53
UBXN1-218ENST00000616865 VDAC2P45880 294 aaPredicted RBP11.71□□□□□ -0.53
UBXN1-218ENST00000616865 MECP2P51608 486 aaKnown RBP11.71□□□□□ -0.53
UBXN1-218ENST00000616865 GNB1P62873 340 aa11.71□□□□□ -0.53
UBXN1-218ENST00000616865 OR4A47Q6IF82 309 aa11.71□□□□□ -0.53
UBXN1-218ENST00000616865 PPP1R27Q86WC6 154 aa11.71□□□□□ -0.53
UBXN1-218ENST00000616865 WFDC9Q8NEX5 89 aa11.71□□□□□ -0.53
UBXN1-218ENST00000616865 OR52B4Q8NGK2 314 aa11.71□□□□□ -0.53
UBXN1-218ENST00000616865 OR4A5Q8NH83 315 aa11.71□□□□□ -0.53
UBXN1-218ENST00000616865 ZNF431Q8TF32 576 aaPredicted RBP11.71□□□□□ -0.53
UBXN1-218ENST00000616865 ABHD5Q8WTS1 349 aa11.71□□□□□ -0.53
UBXN1-218ENST00000616865 TMEM56Q96MV1 263 aa11.71□□□□□ -0.53
UBXN1-218ENST00000616865 TMEM140Q9NV12 185 aa11.71□□□□□ -0.53
UBXN1-218ENST00000616865 TMEM56-RWDD3S4R434 201 aa11.71□□□□□ -0.53
UBXN1-218ENST00000616865 NBEAL2Q6ZNJ1 2754 aa11.7□□□□□ -0.54
UBXN1-218ENST00000616865 K7EIL1 84 aa11.7□□□□□ -0.54
UBXN1-218ENST00000616865 KBTBD11O94819 623 aa11.7□□□□□ -0.54
UBXN1-218ENST00000616865 IFNA21P01568 189 aa11.7□□□□□ -0.54
UBXN1-218ENST00000616865 IGKV1-39P01597 117 aa11.7□□□□□ -0.54
UBXN1-218ENST00000616865 IGKV1D-39P04432 117 aa11.7□□□□□ -0.54
UBXN1-218ENST00000616865 PF4V1P10720 104 aa11.7□□□□□ -0.54
UBXN1-218ENST00000616865 BLCAPP62952 87 aa11.7□□□□□ -0.54
UBXN1-218ENST00000616865 CD83Q01151 205 aa11.7□□□□□ -0.54
UBXN1-218ENST00000616865 POU2AF1Q16633 256 aa11.7□□□□□ -0.54
UBXN1-218ENST00000616865 ANKRD55Q3KP44 614 aa11.7□□□□□ -0.54
UBXN1-218ENST00000616865 MMD2Q8IY49 270 aa11.7□□□□□ -0.54
UBXN1-218ENST00000616865 FAM71E2Q8N5Q1 922 aa11.7□□□□□ -0.54
UBXN1-218ENST00000616865 SLC35G3Q8N808 338 aa11.7□□□□□ -0.54
UBXN1-218ENST00000616865 OR4A16Q8NH70 328 aa11.7□□□□□ -0.54
UBXN1-218ENST00000616865 SEC22AQ96IW7 307 aa11.7□□□□□ -0.54
UBXN1-218ENST00000616865 COL7A1Q02388 2944 aa11.7□□□□□ -0.54
UBXN1-218ENST00000616865 A0A0B4J2A0 478 aa11.69□□□□□ -0.54
UBXN1-218ENST00000616865 DUXBA0A1W2PPF3 345 aa11.69□□□□□ -0.54
UBXN1-218ENST00000616865 A0A1W2PRX2 142 aa11.69□□□□□ -0.54
UBXN1-218ENST00000616865 SH2D7A6NKC9 451 aaPredicted RBP11.69□□□□□ -0.54
UBXN1-218ENST00000616865 TNXAQ16473 311 aa11.69□□□□□ -0.54
UBXN1-218ENST00000616865 PRSS8Q16651 343 aa11.69□□□□□ -0.54
UBXN1-218ENST00000616865 C11orf87Q6NUJ2 197 aa11.69□□□□□ -0.54
UBXN1-218ENST00000616865 FAM219AQ8IW50 185 aa11.69□□□□□ -0.54
UBXN1-218ENST00000616865 PUSL1Q8N0Z8 303 aaKnown RBP11.69□□□□□ -0.54
UBXN1-218ENST00000616865 C12orf45Q8N5I9 185 aaPredicted RBP11.69□□□□□ -0.54
UBXN1-218ENST00000616865 LHFPL5Q8TAF8 219 aa11.69□□□□□ -0.54
UBXN1-218ENST00000616865 TMEM167AQ8TBQ9 72 aa11.69□□□□□ -0.54
UBXN1-218ENST00000616865 TPSG1Q9NRR2 321 aa11.69□□□□□ -0.54
UBXN1-218ENST00000616865 BET1LQ9NYM9 111 aa11.69□□□□□ -0.54
UBXN1-218ENST00000616865 SHPKQ9UHJ6 478 aa11.69□□□□□ -0.54
UBXN1-218ENST00000616865 SNRPGP15A8MWD9 76 aa11.68□□□□□ -0.54
UBXN1-218ENST00000616865 UPK2O00526 184 aa11.68□□□□□ -0.54
UBXN1-218ENST00000616865 SSNA1O43805 119 aa11.68□□□□□ -0.54
UBXN1-218ENST00000616865 CA2P00918 260 aa11.68□□□□□ -0.54
UBXN1-218ENST00000616865 IGKV1-5P01602 117 aa11.68□□□□□ -0.54
UBXN1-218ENST00000616865 HLA-DRB1P01911 266 aa11.68□□□□□ -0.54
UBXN1-218ENST00000616865 CRYGBP07316 175 aa11.68□□□□□ -0.54
UBXN1-218ENST00000616865 HOXB5P09067 269 aa11.68□□□□□ -0.54
UBXN1-218ENST00000616865 VDAC1P21796 283 aa11.68□□□□□ -0.54
UBXN1-218ENST00000616865 MAS1LP35410 378 aa11.68□□□□□ -0.54
UBXN1-218ENST00000616865 RPL8P62917 257 aaKnown RBP11.68□□□□□ -0.54
UBXN1-218ENST00000616865 OXA1LQ15070 435 aa11.68□□□□□ -0.54
UBXN1-218ENST00000616865 THOC7Q6I9Y2 204 aaKnown RBP11.68□□□□□ -0.54
UBXN1-218ENST00000616865 LYZL2Q7Z4W2 148 aa11.68□□□□□ -0.54
UBXN1-218ENST00000616865 SLC35E3Q7Z769 313 aa11.68□□□□□ -0.54
UBXN1-218ENST00000616865 LRTM2Q8N967 370 aa11.68□□□□□ -0.54
UBXN1-218ENST00000616865 OR5AU1Q8NGC0 362 aa11.68□□□□□ -0.54
UBXN1-218ENST00000616865 CHPT1Q8WUD6 406 aa11.68□□□□□ -0.54
UBXN1-218ENST00000616865 MITD1Q8WV92 249 aa11.68□□□□□ -0.54
UBXN1-218ENST00000616865 ZNF430Q9H8G1 570 aaPredicted RBP11.68□□□□□ -0.54
UBXN1-218ENST00000616865 PARP11Q9NR21 331 aa11.68□□□□□ -0.54
UBXN1-218ENST00000616865 FCN1O00602 326 aa11.67□□□□□ -0.54
UBXN1-218ENST00000616865 PF4P02776 101 aa11.67□□□□□ -0.54
UBXN1-218ENST00000616865 AMY1AP04745 511 aa11.67□□□□□ -0.54
UBXN1-218ENST00000616865 HLA-GP17693 338 aa11.67□□□□□ -0.54
UBXN1-218ENST00000616865 PJVKQ0ZLH3 352 aa11.67□□□□□ -0.54
UBXN1-218ENST00000616865 FXYD3Q14802 87 aa11.67□□□□□ -0.54
UBXN1-218ENST00000616865 TATDN3Q17R31 274 aa11.67□□□□□ -0.54
UBXN1-218ENST00000616865 FOXRED2Q8IWF2 684 aa11.67□□□□□ -0.54
UBXN1-218ENST00000616865 GRPEL2Q8TAA5 225 aa11.67□□□□□ -0.54
UBXN1-218ENST00000616865 LSM10Q969L4 123 aaKnown RBP11.67□□□□□ -0.54
UBXN1-218ENST00000616865 PDCD10Q9BUL8 212 aa11.67□□□□□ -0.54
UBXN1-218ENST00000616865 COMMD5Q9GZQ3 224 aa11.67□□□□□ -0.54
UBXN1-218ENST00000616865 FKBP11Q9NYL4 201 aa11.67□□□□□ -0.54
UBXN1-218ENST00000616865 PRNDQ9UKY0 176 aa11.67□□□□□ -0.54
UBXN1-218ENST00000616865 NSG2Q9Y328 171 aa11.67□□□□□ -0.54
UBXN1-218ENST00000616865 TMED3Q9Y3Q3 217 aa11.67□□□□□ -0.54
UBXN1-218ENST00000616865 OR9G9P0C7N8 305 aa11.66□□□□□ -0.54
UBXN1-218ENST00000616865 SULT1A3P0DMM9 295 aa11.66□□□□□ -0.54
UBXN1-218ENST00000616865 SULT1A4P0DMN0 295 aa11.66□□□□□ -0.54
UBXN1-218ENST00000616865 OR2B8PP59922 312 aa11.66□□□□□ -0.54
UBXN1-218ENST00000616865 CX3CL1P78423 397 aa11.66□□□□□ -0.54
UBXN1-218ENST00000616865 IZUMO4Q1ZYL8 232 aa11.66□□□□□ -0.54
UBXN1-218ENST00000616865 TCTEX1D4Q5JR98 221 aa11.66□□□□□ -0.54
UBXN1-218ENST00000616865 GGNBP1Q5YKI7 109 aa11.66□□□□□ -0.54
UBXN1-218ENST00000616865 ZNF562Q6V9R5 426 aa11.66□□□□□ -0.54
UBXN1-218ENST00000616865 CADM3Q8N126 398 aa11.66□□□□□ -0.54
UBXN1-218ENST00000616865 ARPC1AQ92747 370 aa11.66□□□□□ -0.54
UBXN1-218ENST00000616865 GPR146Q96CH1 333 aa11.66□□□□□ -0.54
UBXN1-218ENST00000616865 RCC1LQ96I51 464 aaKnown RBP11.66□□□□□ -0.54
UBXN1-218ENST00000616865 SPIN2AQ99865 258 aa11.66□□□□□ -0.54
UBXN1-218ENST00000616865 SPIN2BQ9BPZ2 258 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms