RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 COL4A5P29400 1685 aa15.82■□□□□ 0.12
GABPB1-212ENST00000615671 FABP2P12104 132 aa15.81■□□□□ 0.12
GABPB1-212ENST00000615671 METRNQ9UJH8 293 aa15.81■□□□□ 0.12
GABPB1-212ENST00000615671 OTOFQ9HC10 1997 aa15.81■□□□□ 0.12
GABPB1-212ENST00000615671 GLRXP35754 106 aa15.81■□□□□ 0.12
GABPB1-212ENST00000615671 TFF3Q07654 80 aa15.81■□□□□ 0.12
GABPB1-212ENST00000615671 PEMTQ9UBM1 199 aa15.81■□□□□ 0.12
GABPB1-212ENST00000615671 GAGE10A6NGK3 116 aa15.81■□□□□ 0.12
GABPB1-212ENST00000615671 IL6RP08887 468 aaPredicted RBP15.81■□□□□ 0.12
GABPB1-212ENST00000615671 FOXA3P55318 350 aaPredicted RBP15.81■□□□□ 0.12
GABPB1-212ENST00000615671 DEFB104AQ8WTQ1 72 aa15.81■□□□□ 0.12
GABPB1-212ENST00000615671 TSPAN13O95857 204 aa15.81■□□□□ 0.12
GABPB1-212ENST00000615671 CENPWQ5EE01 88 aa15.81■□□□□ 0.12
GABPB1-212ENST00000615671 RBM38Q9H0Z9 239 aaKnown RBP15.81■□□□□ 0.12
GABPB1-212ENST00000615671 CFAP161Q6P656 301 aa15.81■□□□□ 0.12
GABPB1-212ENST00000615671 TCF24Q7RTU0 167 aa15.81■□□□□ 0.12
GABPB1-212ENST00000615671 C1QL2Q7Z5L3 287 aa15.81■□□□□ 0.12
GABPB1-212ENST00000615671 SPSB4Q96A44 273 aa15.81■□□□□ 0.12
GABPB1-212ENST00000615671 SOX21Q9Y651 276 aaPredicted RBP15.81■□□□□ 0.12
GABPB1-212ENST00000615671 OR10S1Q8NGN2 331 aa15.8■□□□□ 0.12
GABPB1-212ENST00000615671 FAM131CQ96AQ9 280 aa15.8■□□□□ 0.12
GABPB1-212ENST00000615671 IGKV1D-43A0A0B4J1Z2 117 aa15.8■□□□□ 0.12
GABPB1-212ENST00000615671 WNT10AQ9GZT5 417 aa15.8■□□□□ 0.12
GABPB1-212ENST00000615671 COL11A1P12107 1806 aaPredicted RBP15.8■□□□□ 0.12
GABPB1-212ENST00000615671 CGAP01215 116 aa15.8■□□□□ 0.12
GABPB1-212ENST00000615671 CDX1P47902 265 aaPredicted RBP15.8■□□□□ 0.12
GABPB1-212ENST00000615671 EGR4Q05215 589 aa15.8■□□□□ 0.12
GABPB1-212ENST00000615671 ZNF345Q14585 488 aa15.8■□□□□ 0.12
GABPB1-212ENST00000615671 GFI1BQ5VTD9 330 aa15.8■□□□□ 0.12
GABPB1-212ENST00000615671 PKIAP61925 76 aa15.8■□□□□ 0.12
GABPB1-212ENST00000615671 CCDC88CQ9P219 2028 aa15.8■□□□□ 0.12
GABPB1-212ENST00000615671 MSGN1A6NI15 193 aa15.8■□□□□ 0.12
GABPB1-212ENST00000615671 HLA-DRB1P01911 266 aa15.8■□□□□ 0.12
GABPB1-212ENST00000615671 C2orf88Q9BSF0 95 aa15.8■□□□□ 0.12
GABPB1-212ENST00000615671 MRPS16Q9Y3D3 137 aaKnown RBP15.8■□□□□ 0.12
GABPB1-212ENST00000615671 A0A0G2JLM5 398 aa15.79■□□□□ 0.12
GABPB1-212ENST00000615671 NDUFA3O95167 84 aa15.79■□□□□ 0.12
GABPB1-212ENST00000615671 GCHFRP30047 84 aa15.79■□□□□ 0.12
GABPB1-212ENST00000615671 ZNF837Q96EG3 531 aaPredicted RBP15.79■□□□□ 0.12
GABPB1-212ENST00000615671 KIR3DL3Q8N743 410 aa15.79■□□□□ 0.12
GABPB1-212ENST00000615671 UBR3Q6ZT12 1888 aa15.79■□□□□ 0.12
GABPB1-212ENST00000615671 TRAV40A0A0B4J280 105 aa15.79■□□□□ 0.12
GABPB1-212ENST00000615671 CD33P20138 364 aa15.79■□□□□ 0.12
GABPB1-212ENST00000615671 TMEM187Q14656 261 aa15.79■□□□□ 0.12
GABPB1-212ENST00000615671 LEMD1Q68G75 181 aa15.79■□□□□ 0.12
GABPB1-212ENST00000615671 SAXO1Q8IYX7 474 aa15.79■□□□□ 0.12
GABPB1-212ENST00000615671 LTBP4Q8N2S1 1624 aa15.79■□□□□ 0.12
GABPB1-212ENST00000615671 C17orf98A8MV24 154 aa15.79■□□□□ 0.12
GABPB1-212ENST00000615671 RIPPLY3P57055 190 aa15.79■□□□□ 0.12
GABPB1-212ENST00000615671 OR10AG1Q8NH19 301 aa15.79■□□□□ 0.12
GABPB1-212ENST00000615671 MRPS18AQ9NVS2 196 aaKnown RBP15.79■□□□□ 0.12
GABPB1-212ENST00000615671 C21orf62Q9NYP8 219 aa15.79■□□□□ 0.12
GABPB1-212ENST00000615671 LAMB2P55268 1798 aa15.79■□□□□ 0.12
GABPB1-212ENST00000615671 SPACA3Q8IXA5 215 aa15.79■□□□□ 0.12
GABPB1-212ENST00000615671 PLP1P60201 277 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 GTSCR1Q86UQ5 136 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 C12orf77C9JDV5 145 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 AGAP20933 346 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 FAM90A10PA6NDY2 464 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 FAM90A18PA6NE21 464 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 FAM90A16PA6NEW6 464 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 FAM90A20PA6NIJ5 464 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 FAM90A8PA6NJQ4 464 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 FAM90A7PA6NKC0 464 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 FAM90A22PA8MWA6 464 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 FAM90A12PA8MX19 464 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 FAM90A5PA8MXJ8 464 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 FAM90A23PA8MXZ1 464 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 FAM90A15PP0C7V4 464 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 FAM90A13PP0C7W8 464 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 FAM90A14PP0C7W9 464 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 FAM90A24PP0C7X0 464 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 SFRP2Q96HF1 295 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 NPIPB4C9JG80 1138 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 CD7P09564 240 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 TMEM136Q6ZRR5 245 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 SLC25A38Q96DW6 304 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 COX5BP10606 129 aa15.78■□□□□ 0.12
GABPB1-212ENST00000615671 RGPD3A6NKT7 1758 aaPredicted RBP15.77■□□□□ 0.12
GABPB1-212ENST00000615671 PRR32B1ATL7 298 aa15.77■□□□□ 0.12
GABPB1-212ENST00000615671 SMIM10L1P0DMW3 83 aa15.77■□□□□ 0.12
GABPB1-212ENST00000615671 SMIM10Q96HG1 83 aa15.77■□□□□ 0.12
GABPB1-212ENST00000615671 ZFC3H1O60293 1989 aaKnown RBP15.77■□□□□ 0.12
GABPB1-212ENST00000615671 WDYHV1Q96HA8 205 aa15.77■□□□□ 0.12
GABPB1-212ENST00000615671 NRIP2Q9BQI9 281 aa15.77■□□□□ 0.12
GABPB1-212ENST00000615671 RIPPLY2Q5TAB7 128 aa15.77■□□□□ 0.11
GABPB1-212ENST00000615671 STPG2Q8N412 459 aa15.77■□□□□ 0.11
GABPB1-212ENST00000615671 RNASEH2CQ8TDP1 164 aaKnown RBP15.77■□□□□ 0.11
GABPB1-212ENST00000615671 COL25A1Q9BXS0 654 aaPredicted RBP15.77■□□□□ 0.11
GABPB1-212ENST00000615671 PEX7O00628 323 aa15.77■□□□□ 0.11
GABPB1-212ENST00000615671 C8orf46Q8TAG6 207 aa15.77■□□□□ 0.11
GABPB1-212ENST00000615671 VGLL1Q99990 258 aa15.77■□□□□ 0.11
GABPB1-212ENST00000615671 PIN1P1O15428 100 aa15.77■□□□□ 0.11
GABPB1-212ENST00000615671 HLA-DQA1P01909 254 aa15.77■□□□□ 0.11
GABPB1-212ENST00000615671 ST6GALNAC3Q8NDV1 305 aa15.77■□□□□ 0.11
GABPB1-212ENST00000615671 NUDT10Q8NFP7 164 aa15.77■□□□□ 0.11
GABPB1-212ENST00000615671 NUDT11Q96G61 164 aa15.77■□□□□ 0.11
GABPB1-212ENST00000615671 GCM2O75603 506 aaPredicted RBP15.76■□□□□ 0.11
GABPB1-212ENST00000615671 SRSF7Q16629 238 aaKnown RBP eCLIP15.76■□□□□ 0.11
GABPB1-212ENST00000615671 REC114Q7Z4M0 266 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms