RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 SSX8Q7RTT4 187 aa9.02□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 FAM222BQ8WU58 562 aa9.02□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 SSMEM1Q8WWF3 244 aa9.02□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 ZC2HC1AQ96GY0 325 aa9.02□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 ACTR3CQ9C0K3 210 aaPredicted RBP9.02□□□□□ -0.96
SENP3-EIF4A1-201ENST00000614237 ZFHX2Q9C0A1 2572 aaPredicted RBP9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 SRRM5B3KS81 715 aa9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 C12orf77C9JDV5 145 aa9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 CEACAM8P31997 349 aaPredicted RBP9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 AMTP48728 403 aa9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 FXYD3Q14802 87 aa9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 ATP6V1FQ16864 119 aa9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 VWC2Q2TAL6 325 aa9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 ZNF525Q8N782 197 aa9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 OR6C3Q9NZP0 311 aa9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 KBTBD11O94819 623 aa9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 CRISP2P16562 243 aa9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 FOXF2Q12947 444 aa9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 KRTCAP3Q53RY4 240 aa9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 MRPL54Q6P161 138 aaKnown RBP9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 VHLLQ6RSH7 139 aa9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 HAPLN4Q86UW8 402 aa9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 GBGT1Q8N5D6 347 aa9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 RNASE8Q8TDE3 154 aaKnown RBP9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 TAF15Q92804 592 aaKnown RBP eCLIP9.02□□□□□ -0.975e-6■□□□□ 9.3
SENP3-EIF4A1-201ENST00000614237 RIF1Q5UIP0 2472 aaKnown RBP9.02□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 C20orf202A1L168 122 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 RAB29O14966 203 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 SRSF6Q13247 344 aaKnown RBP9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 LRRC75BQ2VPJ9 315 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 LBHQ53QV2 105 aaPredicted RBP9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 LCN12Q6JVE5 192 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 TMEM170AQ8WVE7 144 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 VPS25Q9BRG1 176 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 SFXN3Q9BWM7 321 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 LINC00574Q9H8X3 128 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 MGST1P10620 155 aaKnown RBP9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 TMEM30BQ3MIR4 351 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 Q6ZWC4 215 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 NHLRC2Q8NBF2 726 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 HSD17B10Q99714 261 aaKnown RBP9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 PCNX2A6NKB5 2137 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 F2RL2O00254 374 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 ZG16O60844 167 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 CLDN14O95500 239 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 CRYABP02511 175 aaKnown RBP9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 GLRXP35754 106 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 NBL1P41271 181 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 RND2P52198 227 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 GCNT2Q8N0V5 402 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 FGFRL1Q8N441 504 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 SIGLECL1Q8N7X8 197 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 C5orf30Q96GV9 206 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 AGMATQ9BSE5 352 aa9.01□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 SNURFLB1AK76 121 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 F6UZH7 168 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 RBFOX2O43251 390 aaKnown RBP eCLIP9□□□□□ -0.979e-8■■■□□ 15.4
SENP3-EIF4A1-201ENST00000614237 HBZP02008 142 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 CGB3P0DN86 165 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 CGB7P0DN87 165 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 BRWD1-AS2P59051 145 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 CATR1Q13166 79 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 ACOT6Q3I5F7 207 aaPredicted RBP9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 CYP2G1PQ6ZSU1 146 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 ZCCHC14Q8WYQ9 949 aaKnown RBP9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 NEIL1Q96FI4 390 aaPredicted RBP9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 YPEL1O60688 119 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 HNRNPA3P51991 378 aaKnown RBP9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 VAMP3Q15836 100 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 C1orf194Q5T5A4 169 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 CNEP1R1Q8N9A8 125 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 Q8TCH9 128 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 PINX1Q96BK5 328 aaKnown RBP9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 YPEL2Q96QA6 119 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 JPT1Q9UK76 154 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 PKDREJQ9NTG1 2253 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 TNCP24821 2201 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 DIRC3C9JPN6 131 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 TIMM8AO60220 97 aaPredicted RBP9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 RAMP3O60896 148 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 GRPP07492 148 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 OR5G3P0C626 314 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 TCF15Q12870 199 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 DEFB109BQ30KR1 87 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 C1orf185Q5T7R7 199 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 BEND2Q8NDZ0 799 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 OR52E5Q8NH55 327 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 NAT8BQ9UHF3 227 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 FAM215AQ9Y5M1 114 aa9□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 PMS2P5A8MQ11 134 aa8.99□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 BRS3P32247 399 aa8.99□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 SUMO1P63165 101 aaKnown RBP8.99□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 SPATA45Q537H7 98 aa8.99□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 STPG4Q8N801 248 aa8.99□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 OR5AU1Q8NGC0 362 aa8.99□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 UHRF2Q96PU4 802 aa8.99□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 WDR61Q9GZS3 305 aaKnown RBP8.99□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 CTDSP1Q9GZU7 261 aa8.99□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 CACNA1BQ00975 2339 aa8.99□□□□□ -0.97
SENP3-EIF4A1-201ENST00000614237 M0QZ24 198 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms