RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 OR4A4PQ8NGN8 299 aa7.35□□□□□ -1.23
SSX3-204ENST00000612497 VSTM2AQ8TAG5 236 aa7.35□□□□□ -1.23
SSX3-204ENST00000612497 BSCL2Q96G97 398 aaPredicted RBP7.35□□□□□ -1.23
SSX3-204ENST00000612497 FAM210BQ96KR6 192 aa7.35□□□□□ -1.23
SSX3-204ENST00000612497 Q96MT0 163 aa7.35□□□□□ -1.23
SSX3-204ENST00000612497 CMSS1Q9BQ75 279 aaKnown RBP7.35□□□□□ -1.23
SSX3-204ENST00000612497 KCNK15Q9H427 330 aa7.35□□□□□ -1.23
SSX3-204ENST00000612497 TMEM14BQ9NUH8 114 aa7.35□□□□□ -1.23
SSX3-204ENST00000612497 BABAM2Q9NXR7 383 aa7.35□□□□□ -1.23
SSX3-204ENST00000612497 CLEC5AQ9NY25 188 aa7.35□□□□□ -1.23
SSX3-204ENST00000612497 SMPD3Q9NY59 655 aaPredicted RBP7.35□□□□□ -1.23
SSX3-204ENST00000612497 OAZ3Q9UMX2 235 aa7.35□□□□□ -1.23
SSX3-204ENST00000612497 IGHV3OR16-13A0A075B7E8 117 aa7.34□□□□□ -1.23
SSX3-204ENST00000612497 A0A0A6YYD4 124 aa7.34□□□□□ -1.23
SSX3-204ENST00000612497 IGHV3-74A0A0B4J1X5 117 aa7.34□□□□□ -1.23
SSX3-204ENST00000612497 IGHV7-4-1A0A0J9YVY3 117 aa7.34□□□□□ -1.23
SSX3-204ENST00000612497 F8W735 103 aaPredicted RBP7.34□□□□□ -1.23
SSX3-204ENST00000612497 DNASE2O00115 360 aaPredicted RBP7.34□□□□□ -1.23
SSX3-204ENST00000612497 FABP7O15540 132 aa7.34□□□□□ -1.23
SSX3-204ENST00000612497 DFFBO76075 338 aa7.34□□□□□ -1.23
SSX3-204ENST00000612497 C4BPBP20851 252 aa7.34□□□□□ -1.23
SSX3-204ENST00000612497 ETV1P50549 477 aa7.34□□□□□ -1.23
SSX3-204ENST00000612497 UNC119Q13432 240 aa7.34□□□□□ -1.23
SSX3-204ENST00000612497 ZIK1Q3SY52 487 aaPredicted RBP7.34□□□□□ -1.23
SSX3-204ENST00000612497 SPSB3Q6PJ21 355 aa7.34□□□□□ -1.23
SSX3-204ENST00000612497 TMEM167AQ8TBQ9 72 aa7.34□□□□□ -1.23
SSX3-204ENST00000612497 VN1R17PQ8TDU5 208 aa7.34□□□□□ -1.23
SSX3-204ENST00000612497 DERL3Q96Q80 235 aa7.34□□□□□ -1.23
SSX3-204ENST00000612497 MRPS7Q9Y2R9 242 aaKnown RBP7.34□□□□□ -1.23
SSX3-204ENST00000612497 PRELID3BQ9Y3B1 194 aa7.34□□□□□ -1.23
SSX3-204ENST00000612497 TMED3Q9Y3Q3 217 aa7.34□□□□□ -1.23
SSX3-204ENST00000612497 ORC6Q9Y5N6 252 aa7.34□□□□□ -1.23
SSX3-204ENST00000612497 TRBV6-7A0A0A0MS04 114 aa7.33□□□□□ -1.24
SSX3-204ENST00000612497 NBDYA0A0U1RRE5 68 aa7.33□□□□□ -1.24
SSX3-204ENST00000612497 SAC3D1A6NKF1 404 aa7.33□□□□□ -1.24
SSX3-204ENST00000612497 J3QL48 77 aa7.33□□□□□ -1.24
SSX3-204ENST00000612497 LALBAP00709 142 aa7.33□□□□□ -1.24
SSX3-204ENST00000612497 SPP1P10451 314 aa7.33□□□□□ -1.24
SSX3-204ENST00000612497 GABRB1P18505 474 aa7.33□□□□□ -1.24
SSX3-204ENST00000612497 RPL8P62917 257 aaKnown RBP7.33□□□□□ -1.24
SSX3-204ENST00000612497 Q5VSD8 79 aa7.33□□□□□ -1.24
SSX3-204ENST00000612497 FAM90A2PQ658T7 463 aa7.33□□□□□ -1.24
SSX3-204ENST00000612497 KCTD9Q7L273 389 aa7.33□□□□□ -1.24
SSX3-204ENST00000612497 TCF24Q7RTU0 167 aa7.33□□□□□ -1.24
SSX3-204ENST00000612497 TRPT1Q86TN4 253 aaKnown RBP7.33□□□□□ -1.24
SSX3-204ENST00000612497 UBAC2Q8NBM4 344 aa7.33□□□□□ -1.24
SSX3-204ENST00000612497 FRZBQ92765 325 aa7.33□□□□□ -1.24
SSX3-204ENST00000612497 GINS4Q9BRT9 223 aa7.33□□□□□ -1.24
SSX3-204ENST00000612497 MRPS18AQ9NVS2 196 aaKnown RBP7.33□□□□□ -1.24
SSX3-204ENST00000612497 VPS13BQ7Z7G8 4022 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 IGHV3-21A0A0B4J1V1 117 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 PNMA8CA0A1B0GUJ8 204 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 CGB1A6NKQ9 187 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 J3QRK9 145 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 CYB5BO43169 146 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 YIF1AO95070 293 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 HTN3P15516 51 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 HLA-GP17693 338 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 CELP19835 753 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 FAM3BP58499 235 aaPredicted RBP7.32□□□□□ -1.24
SSX3-204ENST00000612497 KRTAP10-2P60368 255 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 RPL11P62913 178 aaKnown RBP7.32□□□□□ -1.24
SSX3-204ENST00000612497 TTC23Q5W5X9 447 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 PUSL1Q8N0Z8 303 aaKnown RBP7.32□□□□□ -1.24
SSX3-204ENST00000612497 FAM24BQ8N5W8 94 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 ARHGAP5-AS1Q96IT6 56 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 PGLYRP3Q96LB9 341 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 ATG101Q9BSB4 218 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 URM1Q9BTM9 101 aaKnown RBP7.32□□□□□ -1.24
SSX3-204ENST00000612497 CABLES2Q9BTV7 478 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 LPAR5Q9H1C0 372 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 MS4A6AQ9H2W1 248 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 FGF20Q9NP95 211 aaPredicted RBP7.32□□□□□ -1.24
SSX3-204ENST00000612497 HSF4Q9ULV5 492 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 AP4S1Q9Y587 144 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 FAT1Q14517 4588 aa7.32□□□□□ -1.24
SSX3-204ENST00000612497 IGLC7A0M8Q6 106 aa7.31□□□□□ -1.24
SSX3-204ENST00000612497 TMEM14DPA8MWL7 114 aa7.31□□□□□ -1.24
SSX3-204ENST00000612497 GYG2O15488 501 aa7.31□□□□□ -1.24
SSX3-204ENST00000612497 NUPL2O15504 423 aaKnown RBP7.31□□□□□ -1.24
SSX3-204ENST00000612497 SPART-AS1P0CW21 52 aa7.31□□□□□ -1.24
SSX3-204ENST00000612497 FCGR1AP12314 374 aa7.31□□□□□ -1.24
SSX3-204ENST00000612497 GYS2P54840 703 aa7.31□□□□□ -1.24
SSX3-204ENST00000612497 EMP1P54849 157 aa7.31□□□□□ -1.24
SSX3-204ENST00000612497 MRPS15P82914 257 aaKnown RBP7.31□□□□□ -1.24
SSX3-204ENST00000612497 QRFPP83859 136 aa7.31□□□□□ -1.24
SSX3-204ENST00000612497 Q56UQ5 140 aa7.31□□□□□ -1.24
SSX3-204ENST00000612497 SLC25A24Q6NUK1 477 aa7.31□□□□□ -1.24
SSX3-204ENST00000612497 ZNF66Q6ZN08 573 aa7.31□□□□□ -1.24
SSX3-204ENST00000612497 LYPD1Q8N2G4 141 aa7.31□□□□□ -1.24
SSX3-204ENST00000612497 CSNK1G2-AS1Q8NCQ2 148 aa7.31□□□□□ -1.24
SSX3-204ENST00000612497 OR4S2Q8NH73 311 aa7.31□□□□□ -1.24
SSX3-204ENST00000612497 RHOXF1Q8NHV9 184 aa7.31□□□□□ -1.24
SSX3-204ENST00000612497 PECRQ9BY49 303 aa7.31□□□□□ -1.24
SSX3-204ENST00000612497 YTHDF1Q9BYJ9 559 aaKnown RBP7.31□□□□□ -1.24
SSX3-204ENST00000612497 C21orf62Q9NYP8 219 aa7.31□□□□□ -1.24
SSX3-204ENST00000612497 TRAV14DV4A0A0A6YYC5 116 aa7.3□□□□□ -1.24
SSX3-204ENST00000612497 KNCNA6PVL3 124 aa7.3□□□□□ -1.24
SSX3-204ENST00000612497 ALPLP05186 524 aa7.3□□□□□ -1.24
SSX3-204ENST00000612497 CD5P06127 495 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms