RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 NAT8Q9UHE5 227 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 OR51B2Q9Y5P1 312 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 J3QKU1 62 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 PGLYRP1O75594 196 aaPredicted RBP8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 CDKN1AP38936 164 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 ICAM4Q14773 271 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 GABRA6Q16445 453 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 SPINK9Q5DT21 86 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 PLPPR2Q96GM1 343 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 HIST1H2AAQ96QV6 131 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 C1QTNF5Q9BXJ0 243 aa8.99□□□□□ -0.97
PCDHGC3-202ENST00000611950 H0Y980 276 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 PITX3O75364 302 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 NEURL1O76050 574 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 SRP19P09132 144 aaKnown RBP8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 MMP9P14780 707 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 NMSQ5H8A3 153 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 GCSAMLQ5JQS6 135 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 PLPPR1Q8TBJ4 325 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 PRSS50Q9UI38 385 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 A0A1W2PNU3 283 aaPredicted RBP8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 TUSC2O75896 110 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 VDAC1P21796 283 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 LMO1P25800 156 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 PAX9P55771 341 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 FGF12P61328 243 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 SRPXP78539 464 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 ARL16Q0P5N6 197 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 ZNF585BQ52M93 769 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 SPANXN5Q5MJ07 72 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 NECAP1Q8NC96 275 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 PTH2Q96A98 100 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 RBMXL1Q96E39 390 aaKnown RBP8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 SDSLQ96GA7 329 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 SPIN2AQ99865 258 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 SPIN2BQ9BPZ2 258 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 ZNF703Q9H7S9 590 aaPredicted RBP8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 ZNF586Q9NXT0 402 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 VPREB3Q9UKI3 123 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 PAM16Q9Y3D7 125 aa8.98□□□□□ -0.97
PCDHGC3-202ENST00000611950 COL12A1Q99715 3063 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 ODAMA1E959 279 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 CD300LBA8K4G0 201 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 NAPSAO96009 420 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 LHX2P50458 406 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 UCP2P55851 309 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 LINC00205P59089 165 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 PLGLB1Q02325 96 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 PRDM14Q9GZV8 571 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 PLK3Q9H4B4 646 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 CDH20Q9HBT6 801 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 RPRMQ9NS64 109 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 IGKV3D-15A0A087WSY6 115 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 TRAV24A0A0B4J272 114 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 RAB29O14966 203 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 GAGE5Q13069 117 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 GAGE6Q13070 117 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 ZNF880Q6PDB4 577 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 PCSK4Q6UW60 755 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 DOLPP1Q86YN1 238 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 OR4X1Q8NH49 305 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 MRPL30Q8TCC3 161 aaKnown RBP8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 NIPSNAP3BQ9BS92 247 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 QTRT1Q9BXR0 403 aaKnown RBP8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 LINC00470Q9BZP3 86 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 SPRY4Q9C004 299 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 C11orf1Q9H5F2 150 aa8.97□□□□□ -0.97
PCDHGC3-202ENST00000611950 KIAA1324LA8MWY0 1029 aaPredicted RBP8.96□□□□□ -0.97
PCDHGC3-202ENST00000611950 H7BYZ3 331 aa8.96□□□□□ -0.97
PCDHGC3-202ENST00000611950 MT-CO3P00414 261 aa8.96□□□□□ -0.97
PCDHGC3-202ENST00000611950 CELA3BP08861 270 aa8.96□□□□□ -0.97
PCDHGC3-202ENST00000611950 F2RP25116 425 aa8.96□□□□□ -0.97
PCDHGC3-202ENST00000611950 LY6DQ14210 128 aa8.96□□□□□ -0.97
PCDHGC3-202ENST00000611950 TOMM20LQ6UXN7 152 aa8.96□□□□□ -0.97
PCDHGC3-202ENST00000611950 ZNF295-AS1Q8N0V1 137 aa8.96□□□□□ -0.97
PCDHGC3-202ENST00000611950 ZNF808Q8N4W9 903 aaPredicted RBP8.96□□□□□ -0.97
PCDHGC3-202ENST00000611950 OR1B1Q8NGR6 318 aa8.96□□□□□ -0.97
PCDHGC3-202ENST00000611950 HEATR1Q9H583 2144 aaKnown RBP8.96□□□□□ -0.97
PCDHGC3-202ENST00000611950 BOKQ9UMX3 212 aaPredicted RBP8.96□□□□□ -0.97
PCDHGC3-202ENST00000611950 CYSRT1A8MQ03 144 aa8.96□□□□□ -0.98
PCDHGC3-202ENST00000611950 YPEL1O60688 119 aa8.96□□□□□ -0.98
PCDHGC3-202ENST00000611950 HAND1O96004 215 aa8.96□□□□□ -0.98
PCDHGC3-202ENST00000611950 ID3Q02535 119 aa8.96□□□□□ -0.98
PCDHGC3-202ENST00000611950 ATP1A1-AS1Q5TC04 95 aa8.96□□□□□ -0.98
PCDHGC3-202ENST00000611950 GALMQ96C23 342 aa8.96□□□□□ -0.98
PCDHGC3-202ENST00000611950 YPEL2Q96QA6 119 aa8.96□□□□□ -0.98
PCDHGC3-202ENST00000611950 DEFB127Q9H1M4 99 aa8.96□□□□□ -0.98
PCDHGC3-202ENST00000611950 THYN1Q9P016 225 aa8.96□□□□□ -0.98
PCDHGC3-202ENST00000611950 ADGRG4Q8IZF6 3080 aa8.96□□□□□ -0.98
PCDHGC3-202ENST00000611950 IGKV1-39P01597 117 aa8.95□□□□□ -0.98
PCDHGC3-202ENST00000611950 IGKV1D-39P04432 117 aa8.95□□□□□ -0.98
PCDHGC3-202ENST00000611950 GRPP07492 148 aa8.95□□□□□ -0.98
PCDHGC3-202ENST00000611950 CD55P08174 381 aa8.95□□□□□ -0.98
PCDHGC3-202ENST00000611950 HINT1P49773 126 aaPredicted RBP8.95□□□□□ -0.98
PCDHGC3-202ENST00000611950 SRSF1Q07955 248 aaKnown RBP eCLIP8.95□□□□□ -0.98
PCDHGC3-202ENST00000611950 SPATA31B1PQ5VZV4 182 aa8.95□□□□□ -0.98
PCDHGC3-202ENST00000611950 TPRX1Q8N7U7 411 aa8.95□□□□□ -0.98
PCDHGC3-202ENST00000611950 LFNGQ8NES3 379 aa8.95□□□□□ -0.98
PCDHGC3-202ENST00000611950 ATP5SQ99766 215 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms