RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 ADAP1O75689 374 aa17.07■□□□□ 0.32
CBWD3-207ENST00000611426 Q5BKY6 102 aa17.07■□□□□ 0.32
CBWD3-207ENST00000611426 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.07■□□□□ 0.32
CBWD3-207ENST00000611426 WDR89Q96FK6 387 aaPredicted RBP17.07■□□□□ 0.32
CBWD3-207ENST00000611426 C2orf50Q96LR7 162 aa17.07■□□□□ 0.32
CBWD3-207ENST00000611426 OR2D2Q9H210 308 aa17.07■□□□□ 0.32
CBWD3-207ENST00000611426 TMED3Q9Y3Q3 217 aa17.07■□□□□ 0.32
CBWD3-207ENST00000611426 IFNA21P01568 189 aa17.06■□□□□ 0.32
CBWD3-207ENST00000611426 ZNF137PP52743 207 aa17.06■□□□□ 0.32
CBWD3-207ENST00000611426 SP6Q3SY56 376 aa17.06■□□□□ 0.32
CBWD3-207ENST00000611426 ZNF66Q6ZN08 573 aa17.06■□□□□ 0.32
CBWD3-207ENST00000611426 OR8H1Q8NGG4 311 aa17.06■□□□□ 0.32
CBWD3-207ENST00000611426 LHFPL5Q8TAF8 219 aa17.06■□□□□ 0.32
CBWD3-207ENST00000611426 C5orf30Q96GV9 206 aa17.06■□□□□ 0.32
CBWD3-207ENST00000611426 IFI27L2Q9H2X8 130 aa17.06■□□□□ 0.32
CBWD3-207ENST00000611426 PRR13Q9NZ81 148 aa17.06■□□□□ 0.32
CBWD3-207ENST00000611426 SLC25A4P12235 298 aa17.05■□□□□ 0.32
CBWD3-207ENST00000611426 GGNBP1Q5YKI7 109 aa17.05■□□□□ 0.32
CBWD3-207ENST00000611426 LAMTOR1Q6IAA8 161 aa17.05■□□□□ 0.32
CBWD3-207ENST00000611426 TMEM65Q6PI78 240 aa17.05■□□□□ 0.32
CBWD3-207ENST00000611426 C9orf62Q8N4C0 152 aa17.05■□□□□ 0.32
CBWD3-207ENST00000611426 P2RX4Q99571 388 aa17.05■□□□□ 0.32
CBWD3-207ENST00000611426 HSD17B10Q99714 261 aaKnown RBP17.05■□□□□ 0.32
CBWD3-207ENST00000611426 PDCD10Q9BUL8 212 aa17.05■□□□□ 0.32
CBWD3-207ENST00000611426 COL7A1Q02388 2944 aa17.05■□□□□ 0.32
CBWD3-207ENST00000611426 TRAV14DV4A0A0A6YYC5 116 aa17.04■□□□□ 0.32
CBWD3-207ENST00000611426 C5orf51A6NDU8 294 aa17.04■□□□□ 0.32
CBWD3-207ENST00000611426 RPLP1P05386 114 aaKnown RBP17.04■□□□□ 0.32
CBWD3-207ENST00000611426 RPA2P15927 270 aa17.04■□□□□ 0.32
CBWD3-207ENST00000611426 F2RL1P55085 397 aa17.04■□□□□ 0.32
CBWD3-207ENST00000611426 RBPMSQ93062 196 aaKnown RBP17.04■□□□□ 0.32
CBWD3-207ENST00000611426 RBMXL1Q96E39 390 aaKnown RBP17.04■□□□□ 0.32
CBWD3-207ENST00000611426 DUX3Q96PT4 197 aa17.04■□□□□ 0.32
CBWD3-207ENST00000611426 HOXB5P09067 269 aa17.03■□□□□ 0.32
CBWD3-207ENST00000611426 CATR1Q13166 79 aa17.03■□□□□ 0.32
CBWD3-207ENST00000611426 CXorf66Q5JRM2 361 aaPredicted RBP17.03■□□□□ 0.32
CBWD3-207ENST00000611426 SELENOHQ8IZQ5 122 aaKnown RBP17.03■□□□□ 0.32
CBWD3-207ENST00000611426 PPP1R1CQ8WVI7 109 aa17.03■□□□□ 0.32
CBWD3-207ENST00000611426 RAX2Q96IS3 184 aa17.03■□□□□ 0.32
CBWD3-207ENST00000611426 OR10C1Q96KK4 312 aa17.03■□□□□ 0.32
CBWD3-207ENST00000611426 ABHD14AQ9BUJ0 271 aa17.03■□□□□ 0.32
CBWD3-207ENST00000611426 SDHAF2Q9NX18 166 aa17.03■□□□□ 0.32
CBWD3-207ENST00000611426 CCL24O00175 119 aa17.02■□□□□ 0.32
CBWD3-207ENST00000611426 ST8SIA5O15466 376 aa17.02■□□□□ 0.32
CBWD3-207ENST00000611426 VDAC1P21796 283 aa17.02■□□□□ 0.32
CBWD3-207ENST00000611426 FOXE3Q13461 319 aa17.02■□□□□ 0.32
CBWD3-207ENST00000611426 NMSQ5H8A3 153 aa17.02■□□□□ 0.32
CBWD3-207ENST00000611426 TMEM268Q5VZI3 342 aa17.02■□□□□ 0.32
CBWD3-207ENST00000611426 LCNL1Q6ZST4 164 aa17.02■□□□□ 0.32
CBWD3-207ENST00000611426 LYZL2Q7Z4W2 148 aa17.02■□□□□ 0.32
CBWD3-207ENST00000611426 FAM71E2Q8N5Q1 922 aa17.02■□□□□ 0.32
CBWD3-207ENST00000611426 SLC35G3Q8N808 338 aa17.02■□□□□ 0.32
CBWD3-207ENST00000611426 HSPB9Q9BQS6 159 aa17.02■□□□□ 0.32
CBWD3-207ENST00000611426 COMMD9Q9P000 198 aa17.02■□□□□ 0.32
CBWD3-207ENST00000611426 C13orf42A0A1B0GVH6 325 aa17.02■□□□□ 0.31
CBWD3-207ENST00000611426 MPTX1A8MV57 137 aa17.02■□□□□ 0.31
CBWD3-207ENST00000611426 FAM25EA8MYX2 175 aa17.02■□□□□ 0.31
CBWD3-207ENST00000611426 TNFSF12O43508 249 aa17.02■□□□□ 0.31
CBWD3-207ENST00000611426 ELANEP08246 267 aa17.02■□□□□ 0.31
CBWD3-207ENST00000611426 SLC25A6P12236 298 aa17.02■□□□□ 0.31
CBWD3-207ENST00000611426 LYL1P12980 280 aa17.02■□□□□ 0.31
CBWD3-207ENST00000611426 OR51H1Q8NH63 302 aa17.02■□□□□ 0.31
CBWD3-207ENST00000611426 SEC22AQ96IW7 307 aa17.02■□□□□ 0.31
CBWD3-207ENST00000611426 ZMAT5Q9UDW3 170 aaKnown RBP17.02■□□□□ 0.31
CBWD3-207ENST00000611426 RNF150Q9ULK6 438 aa17.02■□□□□ 0.31
CBWD3-207ENST00000611426 RBFOX2O43251 390 aaKnown RBP eCLIP17.01■□□□□ 0.31
CBWD3-207ENST00000611426 PROP1O75360 226 aa17.01■□□□□ 0.31
CBWD3-207ENST00000611426 MPC2O95563 127 aa17.01■□□□□ 0.31
CBWD3-207ENST00000611426 SERPINE2P07093 398 aa17.01■□□□□ 0.31
CBWD3-207ENST00000611426 PSMB6P28072 239 aa17.01■□□□□ 0.31
CBWD3-207ENST00000611426 CDX1P47902 265 aaPredicted RBP17.01■□□□□ 0.31
CBWD3-207ENST00000611426 IAH1Q2TAA2 248 aaPredicted RBP17.01■□□□□ 0.31
CBWD3-207ENST00000611426 ZNF585BQ52M93 769 aa17.01■□□□□ 0.31
CBWD3-207ENST00000611426 C11orf87Q6NUJ2 197 aa17.01■□□□□ 0.31
CBWD3-207ENST00000611426 ZBTB8BQ8NAP8 495 aaPredicted RBP17.01■□□□□ 0.31
CBWD3-207ENST00000611426 LSM10Q969L4 123 aaKnown RBP17.01■□□□□ 0.31
CBWD3-207ENST00000611426 ABHD14BQ96IU4 210 aa17.01■□□□□ 0.31
CBWD3-207ENST00000611426 GPHA2Q96T91 129 aa17.01■□□□□ 0.31
CBWD3-207ENST00000611426 SPIN2AQ99865 258 aa17.01■□□□□ 0.31
CBWD3-207ENST00000611426 SPIN2BQ9BPZ2 258 aa17.01■□□□□ 0.31
CBWD3-207ENST00000611426 RAB29O14966 203 aa17■□□□□ 0.31
CBWD3-207ENST00000611426 DEFB136Q30KP8 78 aa17■□□□□ 0.31
CBWD3-207ENST00000611426 RNF152Q8N8N0 203 aa17■□□□□ 0.31
CBWD3-207ENST00000611426 CD300LFQ8TDQ1 290 aa17■□□□□ 0.31
CBWD3-207ENST00000611426 DNAH9Q9NYC9 4486 aa16.99■□□□□ 0.31
CBWD3-207ENST00000611426 IGHG4P01861 327 aa16.99■□□□□ 0.31
CBWD3-207ENST00000611426 IGF1P05019 195 aa16.99■□□□□ 0.31
CBWD3-207ENST00000611426 PET100P0DJ07 73 aa16.99■□□□□ 0.31
CBWD3-207ENST00000611426 DUTP33316 252 aaKnown RBP16.99■□□□□ 0.31
CBWD3-207ENST00000611426 RPL30P62888 115 aaKnown RBP16.99■□□□□ 0.31
CBWD3-207ENST00000611426 CFHR3Q02985 330 aa16.99■□□□□ 0.31
CBWD3-207ENST00000611426 MMDQ15546 238 aa16.99■□□□□ 0.31
CBWD3-207ENST00000611426 LGALSLQ3ZCW2 172 aaPredicted RBP16.99■□□□□ 0.31
CBWD3-207ENST00000611426 ODF3L1Q8IXM7 274 aa16.99■□□□□ 0.31
CBWD3-207ENST00000611426 ZNF251Q9BRH9 671 aa16.99■□□□□ 0.31
CBWD3-207ENST00000611426 IGKV1-39P01597 117 aa16.98■□□□□ 0.31
CBWD3-207ENST00000611426 IGKV1D-39P04432 117 aa16.98■□□□□ 0.31
CBWD3-207ENST00000611426 BRWD1-AS2P59051 145 aa16.98■□□□□ 0.31
CBWD3-207ENST00000611426 CD69Q07108 199 aa16.98■□□□□ 0.31
CBWD3-207ENST00000611426 FAM71F2Q6NXP2 309 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms