RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 GIMAP1Q8WWP7 306 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 AIFM2Q9BRQ8 373 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 SLC5A7Q9GZV3 580 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 AUNIPQ9H7T9 357 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 HRASLSQ9HDD0 168 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 ZC4H2Q9NQZ6 224 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 DIABLOQ9NR28 239 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 SLC2A8Q9NY64 477 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 BET1LQ9NYM9 111 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 CEPT1Q9Y6K0 416 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 IGLV11-55A0A075B6I3 123 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 TRBV7-1A0A0A6YYK4 115 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 TRAV3A0A0B4J244 114 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 LOC100506127A0A0U1RQW1 187 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 ZNF320A2RRD8 509 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 OR11H12B2RN74 326 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 UPK2O00526 184 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 RBFOX2O43251 390 aaKnown RBP eCLIP5.73□□□□□ -1.49
CUX1-219ENST00000606749 DHFRP00374 187 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 HPRT1P00492 218 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 REG1AP05451 166 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 FCER2P06734 321 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 DEFA4P12838 97 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 GNRHRP30968 328 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 TAS2R31P59538 309 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 OR2B8PP59922 312 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 POU2AF1Q16633 256 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 GUCA2BQ16661 112 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 DHRS11Q6UWP2 260 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 OR5AP2Q8NGF4 316 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 CACNG8Q8WXS5 425 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 EEF1AKMT3Q96AZ1 226 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 WDR89Q96FK6 387 aaPredicted RBP5.73□□□□□ -1.49
CUX1-219ENST00000606749 CXorf58Q96LI9 332 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 RETNQ9HD89 108 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 SELENOKQ9Y6D0 94 aa5.73□□□□□ -1.49
CUX1-219ENST00000606749 IGLC7A0M8Q6 106 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 TMEM213A2RRL7 107 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 XRCC3O43542 346 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 TMEM127O75204 238 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 C8orf88P0DMB2 117 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 NQO2P16083 231 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 CBX5P45973 191 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 FXYD4P59646 89 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 CATR1Q13166 79 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 NEDD8Q15843 81 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 TM4SF20Q53R12 229 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 ZNF57Q68EA5 555 aaPredicted RBP5.72□□□□□ -1.49
CUX1-219ENST00000606749 ZNF818PQ6ZRF7 136 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 TMEM61Q8N0U2 210 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 UXS1Q8NBZ7 420 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 OR51H1Q8NH63 302 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 CD300LFQ8TDQ1 290 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 S100A16Q96FQ6 103 aaKnown RBP5.72□□□□□ -1.49
CUX1-219ENST00000606749 FAM110AQ9BQ89 295 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 SRSF8Q9BRL6 282 aaKnown RBP5.72□□□□□ -1.49
CUX1-219ENST00000606749 WFDC10AQ9H1F0 79 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 SRD5A3Q9H8P0 318 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 PLEKHA2Q9HB19 425 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 MLXQ9UH92 298 aa5.72□□□□□ -1.49
CUX1-219ENST00000606749 TEX50A0A1B0GTY4 177 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 MEIS3P1A6NDR6 274 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 MFSD2BA6NFX1 497 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 A8MWP6 167 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 PGLYRP1O75594 196 aaPredicted RBP5.71□□□□□ -1.5
CUX1-219ENST00000606749 S1PR2O95136 353 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 FGF2P09038 288 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 RPA2P15927 270 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 PTBP1P26599 531 aaKnown RBP eCLIP5.71□□□□□ -1.53e-11■■■■■ 37.9
CUX1-219ENST00000606749 TGFBR1P36897 503 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 RPS19P39019 145 aaKnown RBP5.71□□□□□ -1.5
CUX1-219ENST00000606749 RFX2P48378 723 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 AADACL3Q5VUY0 350 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 UNQ9165/PRO28630Q6UXU0 137 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 SLC16A13Q7RTY0 426 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 TMEM17Q86X19 198 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 CROCCP3Q8IVE0 287 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 DMBX1Q8NFW5 382 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 OR10W1Q8NGF6 305 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 IL17DQ8TAD2 202 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 ZNF502Q8TBZ5 544 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 COMMD5Q9GZQ3 224 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 IFT46Q9NQC8 304 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 TMEM140Q9NV12 185 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 EHFQ9NZC4 300 aa5.71□□□□□ -1.5
CUX1-219ENST00000606749 TRAV25A0A0B4J276 109 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 IGHV3-35A0A0C4DH35 117 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 SCAF4O95104 1147 aaKnown RBP5.7□□□□□ -1.5
CUX1-219ENST00000606749 PMP2P02689 132 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 SERPINE2P07093 398 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 TRAPPC2P0DI81 140 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 TRAPPC2BP0DI82 140 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 NAT1P18440 290 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 F2RP25116 425 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 GPR183P32249 361 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 ELLP55199 621 aaPredicted RBP5.7□□□□□ -1.5
CUX1-219ENST00000606749 HERV-K104P61576 105 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 WT1-ASQ06250 92 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 ANKRD55Q3KP44 614 aa5.7□□□□□ -1.5
CUX1-219ENST00000606749 KCTD21Q4G0X4 260 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms