RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-222ENST00000604236 PXMP4Q9Y6I8 212 aa12.74□□□□□ -0.37
FGFR2-222ENST00000604236 TNRC6BQ9UPQ9 1833 aaKnown RBP12.74□□□□□ -0.37
FGFR2-222ENST00000604236 TRAV5A0A0B4J249 113 aa12.74□□□□□ -0.37
FGFR2-222ENST00000604236 CLDN34H7C241 214 aa12.74□□□□□ -0.37
FGFR2-222ENST00000604236 CNIH1O95406 144 aa12.74□□□□□ -0.37
FGFR2-222ENST00000604236 CA2P00918 260 aa12.74□□□□□ -0.37
FGFR2-222ENST00000604236 CD40P25942 277 aa12.74□□□□□ -0.37
FGFR2-222ENST00000604236 CT45A1Q5HYN5 189 aa12.74□□□□□ -0.37
FGFR2-222ENST00000604236 MRPL54Q6P161 138 aaKnown RBP12.74□□□□□ -0.37
FGFR2-222ENST00000604236 DOLPP1Q86YN1 238 aa12.74□□□□□ -0.37
FGFR2-222ENST00000604236 C15orf54Q8N8G6 183 aa12.74□□□□□ -0.37
FGFR2-222ENST00000604236 CT45A3Q8NHU0 189 aa12.74□□□□□ -0.37
FGFR2-222ENST00000604236 IL22RA2Q969J5 263 aa12.74□□□□□ -0.37
FGFR2-222ENST00000604236 NPCDR1Q9BY65 106 aa12.74□□□□□ -0.37
FGFR2-222ENST00000604236 SEPSECSQ9HD40 501 aaKnown RBP12.74□□□□□ -0.37
FGFR2-222ENST00000604236 IGHV3OR16-13A0A075B7E8 117 aa12.74□□□□□ -0.37
FGFR2-222ENST00000604236 IGHV3-74A0A0B4J1X5 117 aa12.74□□□□□ -0.37
FGFR2-222ENST00000604236 DBX2Q6ZNG2 339 aa12.74□□□□□ -0.37
FGFR2-222ENST00000604236 ZNF383Q8NA42 475 aa12.74□□□□□ -0.37
FGFR2-222ENST00000604236 OR9G1Q8NH87 305 aa12.74□□□□□ -0.37
FGFR2-222ENST00000604236 AP4M1O00189 453 aa12.73□□□□□ -0.37
FGFR2-222ENST00000604236 CGAP01215 116 aa12.73□□□□□ -0.37
FGFR2-222ENST00000604236 OR10J1P30954 320 aa12.73□□□□□ -0.37
FGFR2-222ENST00000604236 LY6DQ14210 128 aa12.73□□□□□ -0.37
FGFR2-222ENST00000604236 TMEM41BQ5BJD5 291 aa12.73□□□□□ -0.37
FGFR2-222ENST00000604236 SLC35E3Q7Z769 313 aa12.73□□□□□ -0.37
FGFR2-222ENST00000604236 NTF3P20783 257 aa12.73□□□□□ -0.37
FGFR2-222ENST00000604236 C1orf185Q5T7R7 199 aa12.73□□□□□ -0.37
FGFR2-222ENST00000604236 MOB1BQ7L9L4 216 aa12.73□□□□□ -0.37
FGFR2-222ENST00000604236 C1QL4Q86Z23 238 aa12.73□□□□□ -0.37
FGFR2-222ENST00000604236 SAXO1Q8IYX7 474 aa12.73□□□□□ -0.37
FGFR2-222ENST00000604236 LRTM2Q8N967 370 aa12.73□□□□□ -0.37
FGFR2-222ENST00000604236 LINC00479Q96M42 142 aa12.73□□□□□ -0.37
FGFR2-222ENST00000604236 MUC21A0A0G2JKD1 596 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 MUC21A0A140T8X8 626 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 SCO2A0A1W2PP80 73 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 MGST3O14880 152 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 IGHV3-23P01764 117 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 GZMHP20718 246 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 NPY1RP25929 384 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 ERVFC1-1P60608 527 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 ZNF90Q03938 601 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 ZNF146Q15072 292 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 MUC21Q5SSG8 566 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 ZNF295-AS1Q8N0V1 137 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 VAX2Q9UIW0 290 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 NACAE9PAV3 2078 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 IGHV1-46P01743 117 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 DUTP33316 252 aaKnown RBP12.72□□□□□ -0.37
FGFR2-222ENST00000604236 ARF6P62330 175 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 RANP62826 216 aaKnown RBP12.72□□□□□ -0.37
FGFR2-222ENST00000604236 OR4A47Q6IF82 309 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 RBMXL3Q8N7X1 1067 aaKnown RBP12.72□□□□□ -0.37
FGFR2-222ENST00000604236 TUBA4BQ9H853 241 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 GAR1Q9NY12 217 aaKnown RBP12.72□□□□□ -0.37
FGFR2-222ENST00000604236 OR6C3Q9NZP0 311 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 OR51B2Q9Y5P1 312 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 XKRY2A2RUG3 117 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 AHRRA9YTQ3 701 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 CCL21O00585 134 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 PROP1O75360 226 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 HMGN3Q15651 99 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 TNXAQ16473 311 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 LRRC75BQ2VPJ9 315 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 ASCL5Q7RTU5 278 aa12.72□□□□□ -0.37
FGFR2-222ENST00000604236 C17orf112F2Z3M2 114 aa12.71□□□□□ -0.37
FGFR2-222ENST00000604236 PPIHO43447 177 aaKnown RBP12.71□□□□□ -0.37
FGFR2-222ENST00000604236 CAMPP49913 170 aa12.71□□□□□ -0.37
FGFR2-222ENST00000604236 PMS2P11Q13670 270 aa12.71□□□□□ -0.37
FGFR2-222ENST00000604236 P2RY6Q15077 328 aa12.71□□□□□ -0.37
FGFR2-222ENST00000604236 ACOT6Q3I5F7 207 aaPredicted RBP12.71□□□□□ -0.37
FGFR2-222ENST00000604236 SGMS2Q8NHU3 365 aa12.71□□□□□ -0.37
FGFR2-222ENST00000604236 MRPL20Q9BYC9 149 aaKnown RBP12.71□□□□□ -0.37
FGFR2-222ENST00000604236 ZNF355PQ9NSJ1 428 aa12.71□□□□□ -0.37
FGFR2-222ENST00000604236 SLC25A15Q9Y619 301 aa12.71□□□□□ -0.37
FGFR2-222ENST00000604236 IGKV3-15P01624 115 aa12.71□□□□□ -0.37
FGFR2-222ENST00000604236 CRYBB3P26998 211 aa12.71□□□□□ -0.37
FGFR2-222ENST00000604236 ELOBQ15370 118 aa12.71□□□□□ -0.37
FGFR2-222ENST00000604236 MALSU1Q96EH3 234 aa12.71□□□□□ -0.37
FGFR2-222ENST00000604236 GP6Q9HCN6 339 aa12.71□□□□□ -0.37
FGFR2-222ENST00000604236 A0A0G2JNJ9 132 aa12.71□□□□□ -0.38
FGFR2-222ENST00000604236 LOC102723971A0A1B0GUV8 181 aa12.71□□□□□ -0.38
FGFR2-222ENST00000604236 MDFIC2A0A1B0GVS7 189 aa12.71□□□□□ -0.38
FGFR2-222ENST00000604236 WNT2P09544 360 aa12.71□□□□□ -0.38
FGFR2-222ENST00000604236 BRWD1-AS2P59051 145 aa12.71□□□□□ -0.38
FGFR2-222ENST00000604236 MIR17HGQ75NE6 70 aa12.71□□□□□ -0.38
FGFR2-222ENST00000604236 LOXL4Q96JB6 756 aa12.71□□□□□ -0.38
FGFR2-222ENST00000604236 Q9UFV3 132 aa12.71□□□□□ -0.38
FGFR2-222ENST00000604236 RAXQ9Y2V3 346 aa12.71□□□□□ -0.38
FGFR2-222ENST00000604236 FAM90A10PA6NDY2 464 aa12.7□□□□□ -0.38
FGFR2-222ENST00000604236 FAM90A18PA6NE21 464 aa12.7□□□□□ -0.38
FGFR2-222ENST00000604236 FAM90A16PA6NEW6 464 aa12.7□□□□□ -0.38
FGFR2-222ENST00000604236 FAM90A20PA6NIJ5 464 aa12.7□□□□□ -0.38
FGFR2-222ENST00000604236 FAM90A8PA6NJQ4 464 aa12.7□□□□□ -0.38
FGFR2-222ENST00000604236 FAM90A7PA6NKC0 464 aa12.7□□□□□ -0.38
FGFR2-222ENST00000604236 FAM90A22PA8MWA6 464 aa12.7□□□□□ -0.38
FGFR2-222ENST00000604236 FAM90A12PA8MX19 464 aa12.7□□□□□ -0.38
FGFR2-222ENST00000604236 FAM90A5PA8MXJ8 464 aa12.7□□□□□ -0.38
FGFR2-222ENST00000604236 FAM90A23PA8MXZ1 464 aa12.7□□□□□ -0.38
FGFR2-222ENST00000604236 FAM90A15PP0C7V4 464 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms