RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 SGPP2Q8IWX5 399 aa19.82■□□□□ 0.76
PNKP-216ENST00000601816 Q8N1Y9 231 aa19.82■□□□□ 0.76
PNKP-216ENST00000601816 COMMD5Q9GZQ3 224 aa19.82■□□□□ 0.76
PNKP-216ENST00000601816 FXYD6Q9H0Q3 95 aa19.82■□□□□ 0.76
PNKP-216ENST00000601816 TRAV3A0A0B4J244 114 aa19.81■□□□□ 0.76
PNKP-216ENST00000601816 PPP5D1E7EU14 171 aa19.81■□□□□ 0.76
PNKP-216ENST00000601816 NDUFB8O95169 186 aa19.81■□□□□ 0.76
PNKP-216ENST00000601816 REG1AP05451 166 aa19.81■□□□□ 0.76
PNKP-216ENST00000601816 DEFA4P12838 97 aa19.81■□□□□ 0.76
PNKP-216ENST00000601816 HIST1H1BP16401 226 aaKnown RBP19.81■□□□□ 0.76
PNKP-216ENST00000601816 HLA-DMAP28067 261 aa19.81■□□□□ 0.76
PNKP-216ENST00000601816 RORCP51449 518 aa19.81■□□□□ 0.76
PNKP-216ENST00000601816 ERVK-16P61578 105 aa19.81■□□□□ 0.76
PNKP-216ENST00000601816 SNX29P2Q8IUI4 249 aa19.81■□□□□ 0.76
PNKP-216ENST00000601816 LYSMD2Q8IV50 215 aa19.81■□□□□ 0.76
PNKP-216ENST00000601816 CMTM1Q8IZ96 169 aa19.81■□□□□ 0.76
PNKP-216ENST00000601816 Q8N402 240 aa19.81■□□□□ 0.76
PNKP-216ENST00000601816 SCPEP1Q9HB40 452 aa19.81■□□□□ 0.76
PNKP-216ENST00000601816 HPGDSO60760 199 aa19.8■□□□□ 0.76
PNKP-216ENST00000601816 GGCTO75223 188 aaKnown RBP19.8■□□□□ 0.76
PNKP-216ENST00000601816 SMIM18P0DKX4 95 aa19.8■□□□□ 0.76
PNKP-216ENST00000601816 IGHV4-30-4P0DP06 118 aa19.8■□□□□ 0.76
PNKP-216ENST00000601816 RPA2P15927 270 aa19.8■□□□□ 0.76
PNKP-216ENST00000601816 F2RP25116 425 aa19.8■□□□□ 0.76
PNKP-216ENST00000601816 TENM3Q9P273 2699 aa19.79■□□□□ 0.76
PNKP-216ENST00000601816 GPR31O00270 319 aa19.79■□□□□ 0.76
PNKP-216ENST00000601816 IGHV3-23P01764 117 aa19.79■□□□□ 0.76
PNKP-216ENST00000601816 FGF2P09038 288 aa19.79■□□□□ 0.76
PNKP-216ENST00000601816 ELK1P19419 428 aa19.79■□□□□ 0.76
PNKP-216ENST00000601816 KLK9Q2XQG4 91 aa19.79■□□□□ 0.76
PNKP-216ENST00000601816 EEF1AKMT3Q96AZ1 226 aa19.79■□□□□ 0.76
PNKP-216ENST00000601816 SRSF8Q9BRL6 282 aaKnown RBP19.79■□□□□ 0.76
PNKP-216ENST00000601816 KLK9Q9UKQ9 250 aa19.79■□□□□ 0.76
PNKP-216ENST00000601816 DMRT1Q9Y5R6 373 aa19.79■□□□□ 0.76
PNKP-216ENST00000601816 S4R3C0 116 aa19.79■□□□□ 0.76
PNKP-216ENST00000601816 IGLC7A0M8Q6 106 aa19.78■□□□□ 0.76
PNKP-216ENST00000601816 HLA-AP01891 365 aaKnown RBP19.78■□□□□ 0.76
PNKP-216ENST00000601816 RCVRNP35243 200 aa19.78■□□□□ 0.76
PNKP-216ENST00000601816 TSPAN5P62079 268 aa19.78■□□□□ 0.76
PNKP-216ENST00000601816 MZT2AQ6P582 158 aa19.78■□□□□ 0.76
PNKP-216ENST00000601816 CLEC19AQ6UXS0 136 aa19.78■□□□□ 0.76
PNKP-216ENST00000601816 GTSCR1Q86UQ5 136 aa19.78■□□□□ 0.76
PNKP-216ENST00000601816 OR2K2Q8NGT1 345 aa19.78■□□□□ 0.76
PNKP-216ENST00000601816 DGCR14Q96DF8 476 aaKnown RBP19.78■□□□□ 0.76
PNKP-216ENST00000601816 CCDC140Q96MF4 163 aa19.78■□□□□ 0.76
PNKP-216ENST00000601816 RCHY1Q96PM5 261 aa19.78■□□□□ 0.76
PNKP-216ENST00000601816 QTRT1Q9BXR0 403 aaKnown RBP19.78■□□□□ 0.76
PNKP-216ENST00000601816 NAA50Q9GZZ1 169 aaKnown RBP19.78■□□□□ 0.76
PNKP-216ENST00000601816 HUWE1Q7Z6Z7 4374 aaKnown RBP19.77■□□□□ 0.76
PNKP-216ENST00000601816 IGLV11-55A0A075B6I3 123 aa19.77■□□□□ 0.76
PNKP-216ENST00000601816 MARCH11A6NNE9 402 aa19.77■□□□□ 0.76
PNKP-216ENST00000601816 GABARAPO95166 117 aa19.77■□□□□ 0.76
PNKP-216ENST00000601816 OR2C1O95371 312 aa19.77■□□□□ 0.76
PNKP-216ENST00000601816 AP3S1Q92572 193 aa19.77■□□□□ 0.76
PNKP-216ENST00000601816 ZMAT4Q9H898 229 aa19.77■□□□□ 0.76
PNKP-216ENST00000601816 IZUMO1RA6ND01 250 aa19.76■□□□□ 0.75
PNKP-216ENST00000601816 A8MZ25 164 aa19.76■□□□□ 0.75
PNKP-216ENST00000601816 S100GP29377 79 aa19.76■□□□□ 0.75
PNKP-216ENST00000601816 ARL3P36405 182 aa19.76■□□□□ 0.75
PNKP-216ENST00000601816 LPAR6P43657 344 aa19.76■□□□□ 0.75
PNKP-216ENST00000601816 MECP2P51608 486 aaKnown RBP19.76■□□□□ 0.75
PNKP-216ENST00000601816 CTF1Q16619 201 aa19.76■□□□□ 0.75
PNKP-216ENST00000601816 THOC7Q6I9Y2 204 aaKnown RBP19.76■□□□□ 0.75
PNKP-216ENST00000601816 DYNLRB2Q8TF09 96 aa19.76■□□□□ 0.75
PNKP-216ENST00000601816 FCAMRQ8WWV6 532 aa19.76■□□□□ 0.75
PNKP-216ENST00000601816 CXorf58Q96LI9 332 aa19.76■□□□□ 0.75
PNKP-216ENST00000601816 C19orf73Q9NVV2 129 aa19.76■□□□□ 0.75
PNKP-216ENST00000601816 FAM25AB3EWG3 89 aa19.75■□□□□ 0.75
PNKP-216ENST00000601816 FAM25CB3EWG5 89 aa19.75■□□□□ 0.75
PNKP-216ENST00000601816 FAM25GB3EWG6 89 aa19.75■□□□□ 0.75
PNKP-216ENST00000601816 PHLDA2Q53GA4 152 aa19.75■□□□□ 0.75
PNKP-216ENST00000601816 LPCAT3Q6P1A2 487 aa19.75■□□□□ 0.75
PNKP-216ENST00000601816 ADAMTSL5Q6ZMM2 481 aa19.75■□□□□ 0.75
PNKP-216ENST00000601816 THAP7Q9BT49 309 aaPredicted RBP19.75■□□□□ 0.75
PNKP-216ENST00000601816 TRBV7-1A0A0A6YYK4 115 aa19.74■□□□□ 0.75
PNKP-216ENST00000601816 C2orf70A6NJV1 201 aa19.74■□□□□ 0.75
PNKP-216ENST00000601816 LGALS9O00182 355 aa19.74■□□□□ 0.75
PNKP-216ENST00000601816 KRASP01116 189 aa19.74■□□□□ 0.75
PNKP-216ENST00000601816 TRAPPC2P0DI81 140 aa19.74■□□□□ 0.75
PNKP-216ENST00000601816 TRAPPC2BP0DI82 140 aa19.74■□□□□ 0.75
PNKP-216ENST00000601816 ZNF585BQ52M93 769 aa19.74■□□□□ 0.75
PNKP-216ENST00000601816 GPR107Q5VW38 600 aa19.74■□□□□ 0.75
PNKP-216ENST00000601816 GPHB5Q86YW7 130 aa19.74■□□□□ 0.75
PNKP-216ENST00000601816 OR10W1Q8NGF6 305 aa19.74■□□□□ 0.75
PNKP-216ENST00000601816 OR1L8Q8NGR8 309 aa19.74■□□□□ 0.75
PNKP-216ENST00000601816 STAB2Q8WWQ8 2551 aa19.73■□□□□ 0.75
PNKP-216ENST00000601816 MFSD2BA6NFX1 497 aa19.73■□□□□ 0.75
PNKP-216ENST00000601816 CYB5BO43169 146 aa19.73■□□□□ 0.75
PNKP-216ENST00000601816 SNAPC5O75971 98 aa19.73■□□□□ 0.75
PNKP-216ENST00000601816 ZNF182P17025 639 aaPredicted RBP19.73■□□□□ 0.75
PNKP-216ENST00000601816 G6PCP35575 357 aa19.73■□□□□ 0.75
PNKP-216ENST00000601816 CD300EQ496F6 205 aaPredicted RBP19.73■□□□□ 0.75
PNKP-216ENST00000601816 HSD17B13Q7Z5P4 300 aaPredicted RBP19.73■□□□□ 0.75
PNKP-216ENST00000601816 CADM3Q8N126 398 aa19.73■□□□□ 0.75
PNKP-216ENST00000601816 THYN1Q9P016 225 aa19.73■□□□□ 0.75
PNKP-216ENST00000601816 TEX50A0A1B0GTY4 177 aa19.72■□□□□ 0.75
PNKP-216ENST00000601816 FOLR2P14207 255 aa19.72■□□□□ 0.75
PNKP-216ENST00000601816 RNASE12Q5GAN4 147 aaKnown RBP19.72■□□□□ 0.75
PNKP-216ENST00000601816 GDPD1Q8N9F7 314 aa19.72■□□□□ 0.75
PNKP-216ENST00000601816 TM2D3Q9BRN9 247 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms