RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 EIF4EP06730 217 aaKnown RBP17.18■□□□□ 0.34
SSBP4-209ENST00000601357 TAS2R46P59540 309 aa17.18■□□□□ 0.34
SSBP4-209ENST00000601357 NCS1P62166 190 aa17.18■□□□□ 0.34
SSBP4-209ENST00000601357 LYSMD2Q8IV50 215 aa17.18■□□□□ 0.34
SSBP4-209ENST00000601357 OR2K2Q8NGT1 345 aa17.18■□□□□ 0.34
SSBP4-209ENST00000601357 CCDC140Q96MF4 163 aa17.18■□□□□ 0.34
SSBP4-209ENST00000601357 ZNF2Q9BSG1 426 aaPredicted RBP17.18■□□□□ 0.34
SSBP4-209ENST00000601357 HRASLSQ9HDD0 168 aa17.18■□□□□ 0.34
SSBP4-209ENST00000601357 UPK2O00526 184 aa17.17■□□□□ 0.34
SSBP4-209ENST00000601357 S1PR2O95136 353 aa17.17■□□□□ 0.34
SSBP4-209ENST00000601357 DHFRP00374 187 aa17.17■□□□□ 0.34
SSBP4-209ENST00000601357 PMP2P02689 132 aa17.17■□□□□ 0.34
SSBP4-209ENST00000601357 PRSS3P35030 304 aa17.17■□□□□ 0.34
SSBP4-209ENST00000601357 AADACL3Q5VUY0 350 aa17.17■□□□□ 0.34
SSBP4-209ENST00000601357 SGPP2Q8IWX5 399 aa17.17■□□□□ 0.34
SSBP4-209ENST00000601357 CMTM3Q96MX0 182 aa17.17■□□□□ 0.34
SSBP4-209ENST00000601357 COMMD9Q9P000 198 aa17.17■□□□□ 0.34
SSBP4-209ENST00000601357 IGLV11-55A0A075B6I3 123 aa17.16■□□□□ 0.34
SSBP4-209ENST00000601357 IGLC7A0M8Q6 106 aa17.16■□□□□ 0.34
SSBP4-209ENST00000601357 GGCTO75223 188 aaKnown RBP17.16■□□□□ 0.34
SSBP4-209ENST00000601357 PGLYRP1O75594 196 aaPredicted RBP17.16■□□□□ 0.34
SSBP4-209ENST00000601357 HIST1H1BP16401 226 aaKnown RBP17.16■□□□□ 0.34
SSBP4-209ENST00000601357 OR5H2Q8NGV7 314 aa17.16■□□□□ 0.34
SSBP4-209ENST00000601357 GPX8Q8TED1 209 aa17.16■□□□□ 0.34
SSBP4-209ENST00000601357 SRSF8Q9BRL6 282 aaKnown RBP17.16■□□□□ 0.34
SSBP4-209ENST00000601357 TMEM140Q9NV12 185 aa17.16■□□□□ 0.34
SSBP4-209ENST00000601357 LGALS9O00182 355 aa17.15■□□□□ 0.34
SSBP4-209ENST00000601357 HLA-AP01891 365 aaKnown RBP17.15■□□□□ 0.34
SSBP4-209ENST00000601357 APOA1P02647 267 aa17.15■□□□□ 0.34
SSBP4-209ENST00000601357 REG1AP05451 166 aa17.15■□□□□ 0.34
SSBP4-209ENST00000601357 VBP1P61758 197 aa17.15■□□□□ 0.34
SSBP4-209ENST00000601357 FXYD6Q9H0Q3 95 aa17.15■□□□□ 0.34
SSBP4-209ENST00000601357 ZMAT4Q9H898 229 aa17.15■□□□□ 0.34
SSBP4-209ENST00000601357 COMMD3Q9UBI1 195 aa17.15■□□□□ 0.34
SSBP4-209ENST00000601357 C3orf84H3BNL1 204 aa17.14■□□□□ 0.33
SSBP4-209ENST00000601357 IGHV3-23P01764 117 aa17.14■□□□□ 0.33
SSBP4-209ENST00000601357 RLN1P04808 185 aa17.14■□□□□ 0.33
SSBP4-209ENST00000601357 F2RP25116 425 aa17.14■□□□□ 0.33
SSBP4-209ENST00000601357 HRH1P35367 487 aa17.14■□□□□ 0.33
SSBP4-209ENST00000601357 GTSCR1Q86UQ5 136 aa17.14■□□□□ 0.33
SSBP4-209ENST00000601357 GPHB5Q86YW7 130 aa17.14■□□□□ 0.33
SSBP4-209ENST00000601357 DMBX1Q8NFW5 382 aa17.14■□□□□ 0.33
SSBP4-209ENST00000601357 COMMD5Q9GZQ3 224 aa17.14■□□□□ 0.33
SSBP4-209ENST00000601357 S4R3C0 116 aa17.14■□□□□ 0.33
SSBP4-209ENST00000601357 C2orf70A6NJV1 201 aa17.13■□□□□ 0.33
SSBP4-209ENST00000601357 MARCH11A6NNE9 402 aa17.13■□□□□ 0.33
SSBP4-209ENST00000601357 OR2C1O95371 312 aa17.13■□□□□ 0.33
SSBP4-209ENST00000601357 EDN2P20800 178 aa17.13■□□□□ 0.33
SSBP4-209ENST00000601357 CD300EQ496F6 205 aaPredicted RBP17.13■□□□□ 0.33
SSBP4-209ENST00000601357 CLEC19AQ6UXS0 136 aa17.13■□□□□ 0.33
SSBP4-209ENST00000601357 CADM3Q8N126 398 aa17.13■□□□□ 0.33
SSBP4-209ENST00000601357 OR6F1Q8NGZ6 308 aa17.13■□□□□ 0.33
SSBP4-209ENST00000601357 EEF1AKMT3Q96AZ1 226 aa17.13■□□□□ 0.33
SSBP4-209ENST00000601357 DEFA4P12838 97 aa17.12■□□□□ 0.33
SSBP4-209ENST00000601357 FOLR2P14207 255 aa17.12■□□□□ 0.33
SSBP4-209ENST00000601357 ARL3P36405 182 aa17.12■□□□□ 0.33
SSBP4-209ENST00000601357 DEFB114Q30KQ6 69 aa17.12■□□□□ 0.33
SSBP4-209ENST00000601357 ZNF585BQ52M93 769 aa17.12■□□□□ 0.33
SSBP4-209ENST00000601357 LAX1Q8IWV1 398 aa17.12■□□□□ 0.33
SSBP4-209ENST00000601357 DGCR14Q96DF8 476 aaKnown RBP17.12■□□□□ 0.33
SSBP4-209ENST00000601357 CXorf58Q96LI9 332 aa17.12■□□□□ 0.33
SSBP4-209ENST00000601357 QTRT1Q9BXR0 403 aaKnown RBP17.12■□□□□ 0.33
SSBP4-209ENST00000601357 SCPEP1Q9HB40 452 aa17.12■□□□□ 0.33
SSBP4-209ENST00000601357 ZC4H2Q9NQZ6 224 aa17.12■□□□□ 0.33
SSBP4-209ENST00000601357 TRBV7-1A0A0A6YYK4 115 aa17.11■□□□□ 0.33
SSBP4-209ENST00000601357 MFSD2BA6NFX1 497 aa17.11■□□□□ 0.33
SSBP4-209ENST00000601357 ZNF785A8K8V0 405 aa17.11■□□□□ 0.33
SSBP4-209ENST00000601357 GPR31O00270 319 aa17.11■□□□□ 0.33
SSBP4-209ENST00000601357 ELK1P19419 428 aa17.11■□□□□ 0.33
SSBP4-209ENST00000601357 HLA-DMAP28067 261 aa17.11■□□□□ 0.33
SSBP4-209ENST00000601357 CMTM1Q8IZ96 169 aa17.11■□□□□ 0.33
SSBP4-209ENST00000601357 OR10W1Q8NGF6 305 aa17.11■□□□□ 0.33
SSBP4-209ENST00000601357 MUC7Q8TAX7 377 aa17.11■□□□□ 0.33
SSBP4-209ENST00000601357 FCAMRQ8WWV6 532 aa17.11■□□□□ 0.33
SSBP4-209ENST00000601357 SMIM31A0A1B0GVY4 71 aa17.1■□□□□ 0.33
SSBP4-209ENST00000601357 A8MWP6 167 aa17.1■□□□□ 0.33
SSBP4-209ENST00000601357 HPGDSO60760 199 aa17.1■□□□□ 0.33
SSBP4-209ENST00000601357 SMIM18P0DKX4 95 aa17.1■□□□□ 0.33
SSBP4-209ENST00000601357 RPA2P15927 270 aa17.1■□□□□ 0.33
SSBP4-209ENST00000601357 THOC7Q6I9Y2 204 aaKnown RBP17.1■□□□□ 0.33
SSBP4-209ENST00000601357 TEX50A0A1B0GTY4 177 aa17.09■□□□□ 0.33
SSBP4-209ENST00000601357 CBLN1P23435 193 aa17.09■□□□□ 0.33
SSBP4-209ENST00000601357 RCVRNP35243 200 aa17.09■□□□□ 0.33
SSBP4-209ENST00000601357 LPAR6P43657 344 aa17.09■□□□□ 0.33
SSBP4-209ENST00000601357 ERVK-16P61578 105 aa17.09■□□□□ 0.33
SSBP4-209ENST00000601357 WT1-ASQ06250 92 aa17.09■□□□□ 0.33
SSBP4-209ENST00000601357 CTF1Q16619 201 aa17.09■□□□□ 0.33
SSBP4-209ENST00000601357 HAGHQ16775 308 aa17.09■□□□□ 0.33
SSBP4-209ENST00000601357 HSD17B13Q7Z5P4 300 aaPredicted RBP17.09■□□□□ 0.33
SSBP4-209ENST00000601357 SNX29P2Q8IUI4 249 aa17.09■□□□□ 0.33
SSBP4-209ENST00000601357 GDPD1Q8N9F7 314 aa17.09■□□□□ 0.33
SSBP4-209ENST00000601357 ZNF502Q8TBZ5 544 aa17.09■□□□□ 0.33
SSBP4-209ENST00000601357 DYNLRB2Q8TF09 96 aa17.09■□□□□ 0.33
SSBP4-209ENST00000601357 CITED4Q96RK1 184 aa17.09■□□□□ 0.33
SSBP4-209ENST00000601357 NDUFA4L2Q9NRX3 87 aa17.09■□□□□ 0.33
SSBP4-209ENST00000601357 TECRQ9NZ01 308 aaKnown RBP17.09■□□□□ 0.33
SSBP4-209ENST00000601357 TMEM213A2RRL7 107 aa17.08■□□□□ 0.32
SSBP4-209ENST00000601357 GABARAPO95166 117 aa17.08■□□□□ 0.32
SSBP4-209ENST00000601357 KRASP01116 189 aa17.08■□□□□ 0.32
SSBP4-209ENST00000601357 CLEC3BP05452 202 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms