RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 IL17DQ8TAD2 202 aa12.79□□□□□ -0.36
SCAF1-204ENST00000601038 SRD5A3Q9H8P0 318 aa12.79□□□□□ -0.36
SCAF1-204ENST00000601038 RETNQ9HD89 108 aa12.79□□□□□ -0.36
SCAF1-204ENST00000601038 HRASLSQ9HDD0 168 aa12.79□□□□□ -0.36
SCAF1-204ENST00000601038 S4R3C0 116 aa12.79□□□□□ -0.36
SCAF1-204ENST00000601038 IGLV11-55A0A075B6I3 123 aa12.78□□□□□ -0.36
SCAF1-204ENST00000601038 TRBV7-1A0A0A6YYK4 115 aa12.78□□□□□ -0.36
SCAF1-204ENST00000601038 CGB1A6NKQ9 187 aa12.78□□□□□ -0.36
SCAF1-204ENST00000601038 DEFA4P12838 97 aa12.78□□□□□ -0.36
SCAF1-204ENST00000601038 MYOD1P15172 320 aa12.78□□□□□ -0.36
SCAF1-204ENST00000601038 TAS2R31P59538 309 aa12.78□□□□□ -0.36
SCAF1-204ENST00000601038 ZNF773Q6PK81 442 aa12.78□□□□□ -0.36
SCAF1-204ENST00000601038 WDR89Q96FK6 387 aaPredicted RBP12.78□□□□□ -0.36
SCAF1-204ENST00000601038 CXorf58Q96LI9 332 aa12.78□□□□□ -0.36
SCAF1-204ENST00000601038 SLC5A7Q9GZV3 580 aa12.78□□□□□ -0.36
SCAF1-204ENST00000601038 WFDC10AQ9H1F0 79 aa12.78□□□□□ -0.36
SCAF1-204ENST00000601038 RNF167Q9H6Y7 350 aa12.78□□□□□ -0.36
SCAF1-204ENST00000601038 DIABLOQ9NR28 239 aa12.78□□□□□ -0.36
SCAF1-204ENST00000601038 ZNF320A2RRD8 509 aa12.77□□□□□ -0.37
SCAF1-204ENST00000601038 TMEM213A2RRL7 107 aa12.77□□□□□ -0.37
SCAF1-204ENST00000601038 A8MWP6 167 aa12.77□□□□□ -0.37
SCAF1-204ENST00000601038 SULT1C2O00338 296 aa12.77□□□□□ -0.37
SCAF1-204ENST00000601038 ATP6V1G2O95670 118 aa12.77□□□□□ -0.37
SCAF1-204ENST00000601038 HPRT1P00492 218 aa12.77□□□□□ -0.37
SCAF1-204ENST00000601038 REG1AP05451 166 aa12.77□□□□□ -0.37
SCAF1-204ENST00000601038 CLEC3BP05452 202 aa12.77□□□□□ -0.37
SCAF1-204ENST00000601038 OR2B8PP59922 312 aa12.77□□□□□ -0.37
SCAF1-204ENST00000601038 CATR1Q13166 79 aa12.77□□□□□ -0.37
SCAF1-204ENST00000601038 POU2AF1Q16633 256 aa12.77□□□□□ -0.37
SCAF1-204ENST00000601038 ZNF57Q68EA5 555 aaPredicted RBP12.77□□□□□ -0.37
SCAF1-204ENST00000601038 SLC16A13Q7RTY0 426 aa12.77□□□□□ -0.37
SCAF1-204ENST00000601038 GIMAP1Q8WWP7 306 aa12.77□□□□□ -0.37
SCAF1-204ENST00000601038 CACNG8Q8WXS5 425 aa12.77□□□□□ -0.37
SCAF1-204ENST00000601038 FAM110AQ9BQ89 295 aa12.77□□□□□ -0.37
SCAF1-204ENST00000601038 AUNIPQ9H7T9 357 aa12.77□□□□□ -0.37
SCAF1-204ENST00000601038 LOC100506127A0A0U1RQW1 187 aa12.76□□□□□ -0.37
SCAF1-204ENST00000601038 UPK2O00526 184 aa12.76□□□□□ -0.37
SCAF1-204ENST00000601038 TMEM127O75204 238 aa12.76□□□□□ -0.37
SCAF1-204ENST00000601038 FGF2P09038 288 aa12.76□□□□□ -0.37
SCAF1-204ENST00000601038 NQO2P16083 231 aa12.76□□□□□ -0.37
SCAF1-204ENST00000601038 CBX5P45973 191 aa12.76□□□□□ -0.37
SCAF1-204ENST00000601038 TMEM61Q8N0U2 210 aa12.76□□□□□ -0.37
SCAF1-204ENST00000601038 UXS1Q8NBZ7 420 aa12.76□□□□□ -0.37
SCAF1-204ENST00000601038 OR5AP2Q8NGF4 316 aa12.76□□□□□ -0.37
SCAF1-204ENST00000601038 CD300LFQ8TDQ1 290 aa12.76□□□□□ -0.37
SCAF1-204ENST00000601038 SRSF8Q9BRL6 282 aaKnown RBP12.76□□□□□ -0.37
SCAF1-204ENST00000601038 RYR2Q92736 4967 aa12.75□□□□□ -0.37
SCAF1-204ENST00000601038 IGLC7A0M8Q6 106 aa12.75□□□□□ -0.37
SCAF1-204ENST00000601038 MFSD2BA6NFX1 497 aa12.75□□□□□ -0.37
SCAF1-204ENST00000601038 FXYD4P59646 89 aa12.75□□□□□ -0.37
SCAF1-204ENST00000601038 ZNF818PQ6ZRF7 136 aa12.75□□□□□ -0.37
SCAF1-204ENST00000601038 COMMD5Q9GZQ3 224 aa12.75□□□□□ -0.37
SCAF1-204ENST00000601038 PLEKHA2Q9HB19 425 aa12.75□□□□□ -0.37
SCAF1-204ENST00000601038 MLXQ9UH92 298 aa12.75□□□□□ -0.37
SCAF1-204ENST00000601038 TRAV3A0A0B4J244 114 aa12.74□□□□□ -0.37
SCAF1-204ENST00000601038 FCER2P06734 321 aa12.74□□□□□ -0.37
SCAF1-204ENST00000601038 ANKRD55Q3KP44 614 aa12.74□□□□□ -0.37
SCAF1-204ENST00000601038 OR51H1Q8NH63 302 aa12.74□□□□□ -0.37
SCAF1-204ENST00000601038 ZNF502Q8TBZ5 544 aa12.74□□□□□ -0.37
SCAF1-204ENST00000601038 BORCS5Q969J3 196 aa12.74□□□□□ -0.37
SCAF1-204ENST00000601038 MARC2Q969Z3 335 aa12.74□□□□□ -0.37
SCAF1-204ENST00000601038 THYN1Q9P016 225 aa12.74□□□□□ -0.37
SCAF1-204ENST00000601038 SELENOKQ9Y6D0 94 aa12.74□□□□□ -0.37
SCAF1-204ENST00000601038 XRCC3O43542 346 aa12.73□□□□□ -0.37
SCAF1-204ENST00000601038 C8orf88P0DMB2 117 aa12.73□□□□□ -0.37
SCAF1-204ENST00000601038 PTBP1P26599 531 aaKnown RBP eCLIP12.73□□□□□ -0.37
SCAF1-204ENST00000601038 GNRHRP30968 328 aa12.73□□□□□ -0.37
SCAF1-204ENST00000601038 TM4SF20Q53R12 229 aa12.73□□□□□ -0.37
SCAF1-204ENST00000601038 AADACL3Q5VUY0 350 aa12.73□□□□□ -0.37
SCAF1-204ENST00000601038 DHRS11Q6UWP2 260 aa12.73□□□□□ -0.37
SCAF1-204ENST00000601038 UNQ9165/PRO28630Q6UXU0 137 aa12.73□□□□□ -0.37
SCAF1-204ENST00000601038 DMBX1Q8NFW5 382 aa12.73□□□□□ -0.37
SCAF1-204ENST00000601038 OR52B4Q8NGK2 314 aa12.73□□□□□ -0.37
SCAF1-204ENST00000601038 QTRT1Q9BXR0 403 aaKnown RBP12.73□□□□□ -0.37
SCAF1-204ENST00000601038 TMEM140Q9NV12 185 aa12.73□□□□□ -0.37
SCAF1-204ENST00000601038 MRPL27Q9P0M9 148 aaKnown RBP12.73□□□□□ -0.37
SCAF1-204ENST00000601038 DYNC2H1Q8NCM8 4307 aaKnown RBP12.73□□□□□ -0.37
SCAF1-204ENST00000601038 TRAV25A0A0B4J276 109 aa12.72□□□□□ -0.37
SCAF1-204ENST00000601038 SCAF4O95104 1147 aaKnown RBP12.72□□□□□ -0.37
SCAF1-204ENST00000601038 S1PR2O95136 353 aa12.72□□□□□ -0.37
SCAF1-204ENST00000601038 GPR183P32249 361 aa12.72□□□□□ -0.37
SCAF1-204ENST00000601038 ELLP55199 621 aaPredicted RBP12.72□□□□□ -0.37
SCAF1-204ENST00000601038 HERV-K104P61576 105 aa12.72□□□□□ -0.37
SCAF1-204ENST00000601038 NEDD8Q15843 81 aa12.72□□□□□ -0.37
SCAF1-204ENST00000601038 THOC7Q6I9Y2 204 aaKnown RBP12.72□□□□□ -0.37
SCAF1-204ENST00000601038 PLET1Q6UQ28 207 aa12.72□□□□□ -0.37
SCAF1-204ENST00000601038 BTNL8Q6UX41 500 aa12.72□□□□□ -0.37
SCAF1-204ENST00000601038 TMEM17Q86X19 198 aa12.72□□□□□ -0.37
SCAF1-204ENST00000601038 VN1R17PQ8TDU5 208 aa12.72□□□□□ -0.37
SCAF1-204ENST00000601038 S100A16Q96FQ6 103 aaKnown RBP12.72□□□□□ -0.37
SCAF1-204ENST00000601038 COMMD9Q9P000 198 aa12.72□□□□□ -0.37
SCAF1-204ENST00000601038 MEIS3P1A6NDR6 274 aa12.71□□□□□ -0.37
SCAF1-204ENST00000601038 CYB5BO43169 146 aa12.71□□□□□ -0.37
SCAF1-204ENST00000601038 JTBO76095 146 aa12.71□□□□□ -0.37
SCAF1-204ENST00000601038 ZNF585BQ52M93 769 aa12.71□□□□□ -0.37
SCAF1-204ENST00000601038 RBPMS2Q6ZRY4 209 aaKnown RBP12.71□□□□□ -0.37
SCAF1-204ENST00000601038 HSD17B13Q7Z5P4 300 aaPredicted RBP12.71□□□□□ -0.37
SCAF1-204ENST00000601038 CROCCP3Q8IVE0 287 aa12.71□□□□□ -0.37
SCAF1-204ENST00000601038 GDPD1Q8N9F7 314 aa12.71□□□□□ -0.37
SCAF1-204ENST00000601038 OR10W1Q8NGF6 305 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms