RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 HSD17B10Q99714 261 aaKnown RBP12.37□□□□□ -0.43
VRK3-218ENST00000600031 SIRT7Q9NRC8 400 aa12.37□□□□□ -0.43
VRK3-218ENST00000600031 NBPF19A0A087WUL8 3843 aa12.37□□□□□ -0.43
VRK3-218ENST00000600031 PTPN13Q12923 2485 aa12.37□□□□□ -0.43
VRK3-218ENST00000600031 A0A087X0M5 115 aa12.37□□□□□ -0.43
VRK3-218ENST00000600031 A0A1B0GX30 115 aa12.37□□□□□ -0.43
VRK3-218ENST00000600031 CXorf65A6NEN9 183 aa12.37□□□□□ -0.43
VRK3-218ENST00000600031 RAB29O14966 203 aa12.37□□□□□ -0.43
VRK3-218ENST00000600031 RAMP3O60896 148 aa12.37□□□□□ -0.43
VRK3-218ENST00000600031 NXPH3O95157 252 aa12.37□□□□□ -0.43
VRK3-218ENST00000600031 LIPFP07098 398 aa12.37□□□□□ -0.43
VRK3-218ENST00000600031 PRB3Q04118 309 aaPredicted RBP12.37□□□□□ -0.43
VRK3-218ENST00000600031 NCR3LG1Q68D85 454 aa12.37□□□□□ -0.43
VRK3-218ENST00000600031 SLC25A24Q6NUK1 477 aa12.37□□□□□ -0.43
VRK3-218ENST00000600031 RBMS3Q6XE24 437 aaKnown RBP12.37□□□□□ -0.43
VRK3-218ENST00000600031 SLC35E3Q7Z769 313 aa12.37□□□□□ -0.43
VRK3-218ENST00000600031 SCGB1C1Q8TD33 95 aa12.37□□□□□ -0.43
VRK3-218ENST00000600031 C10orf105Q8TEF2 133 aa12.37□□□□□ -0.43
VRK3-218ENST00000600031 NIPSNAP3BQ9BS92 247 aa12.37□□□□□ -0.43
VRK3-218ENST00000600031 ONECUT1Q9UBC0 465 aa12.37□□□□□ -0.43
VRK3-218ENST00000600031 OR8U8P0C7N1 319 aa12.36□□□□□ -0.43
VRK3-218ENST00000600031 PAX1P15863 534 aa12.36□□□□□ -0.43
VRK3-218ENST00000600031 OR2B8PP59922 312 aa12.36□□□□□ -0.43
VRK3-218ENST00000600031 CATR1Q13166 79 aa12.36□□□□□ -0.43
VRK3-218ENST00000600031 HIST2H2BCQ6DN03 193 aa12.36□□□□□ -0.43
VRK3-218ENST00000600031 THNSL2Q86YJ6 484 aa12.36□□□□□ -0.43
VRK3-218ENST00000600031 PIMREGQ9BSJ6 248 aa12.36□□□□□ -0.43
VRK3-218ENST00000600031 TMEM133Q9H2Q1 129 aa12.36□□□□□ -0.43
VRK3-218ENST00000600031 J3QR06 171 aa12.35□□□□□ -0.43
VRK3-218ENST00000600031 SYNGR2O43760 224 aa12.35□□□□□ -0.43
VRK3-218ENST00000600031 NQO2P16083 231 aa12.35□□□□□ -0.43
VRK3-218ENST00000600031 CLEC2AQ6UVW9 174 aa12.35□□□□□ -0.43
VRK3-218ENST00000600031 SLC16A13Q7RTY0 426 aa12.35□□□□□ -0.43
VRK3-218ENST00000600031 ABHD12Q8N2K0 398 aa12.35□□□□□ -0.43
VRK3-218ENST00000600031 Q8N7P7 452 aa12.35□□□□□ -0.43
VRK3-218ENST00000600031 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.35□□□□□ -0.43
VRK3-218ENST00000600031 PSMG3Q9BT73 122 aaPredicted RBP12.35□□□□□ -0.43
VRK3-218ENST00000600031 LOC102723971A0A1B0GUV8 181 aa12.35□□□□□ -0.43
VRK3-218ENST00000600031 VWC2LB2RUY7 222 aa12.35□□□□□ -0.43
VRK3-218ENST00000600031 B4DEV8 164 aa12.35□□□□□ -0.43
VRK3-218ENST00000600031 RBP4P02753 201 aa12.35□□□□□ -0.43
VRK3-218ENST00000600031 ARF6P62330 175 aa12.35□□□□□ -0.43
VRK3-218ENST00000600031 LCN2P80188 198 aa12.35□□□□□ -0.43
VRK3-218ENST00000600031 DLK1P80370 383 aa12.35□□□□□ -0.43
VRK3-218ENST00000600031 CYB561D1Q8N8Q1 229 aa12.35□□□□□ -0.43
VRK3-218ENST00000600031 ZNF596Q8TC21 504 aa12.35□□□□□ -0.43
VRK3-218ENST00000600031 IGHV4-30-2A0A087WSY4 118 aa12.34□□□□□ -0.43
VRK3-218ENST00000600031 NDUFS8O00217 210 aa12.34□□□□□ -0.43
VRK3-218ENST00000600031 RPS10P46783 165 aaKnown RBP12.34□□□□□ -0.43
VRK3-218ENST00000600031 ZNF816Q0VGE8 651 aaPredicted RBP12.34□□□□□ -0.43
VRK3-218ENST00000600031 LINC00311Q8N616 119 aa12.34□□□□□ -0.43
VRK3-218ENST00000600031 C8orf31Q8N9H6 132 aa12.34□□□□□ -0.43
VRK3-218ENST00000600031 OR9G1Q8NH87 305 aa12.34□□□□□ -0.43
VRK3-218ENST00000600031 TMPRSS5Q9H3S3 457 aa12.34□□□□□ -0.43
VRK3-218ENST00000600031 PSENENQ9NZ42 101 aa12.34□□□□□ -0.43
VRK3-218ENST00000600031 CACNG5Q9UF02 275 aa12.34□□□□□ -0.43
VRK3-218ENST00000600031 POLQO75417 2590 aa12.34□□□□□ -0.43
VRK3-218ENST00000600031 IGHV4-61A0A0C4DH41 118 aa12.34□□□□□ -0.43
VRK3-218ENST00000600031 IGKV1-5P01602 117 aa12.34□□□□□ -0.43
VRK3-218ENST00000600031 CEBPGP53567 150 aa12.34□□□□□ -0.43
VRK3-218ENST00000600031 HBG1P69891 147 aa12.34□□□□□ -0.43
VRK3-218ENST00000600031 HBG2P69892 147 aa12.34□□□□□ -0.43
VRK3-218ENST00000600031 TMEM267Q0VDI3 215 aaPredicted RBP12.34□□□□□ -0.43
VRK3-218ENST00000600031 MBD3L1Q8WWY6 194 aa12.34□□□□□ -0.43
VRK3-218ENST00000600031 PARD6GQ9BYG4 376 aaPredicted RBP12.34□□□□□ -0.43
VRK3-218ENST00000600031 IGHV2-26A0A0B4J1V2 119 aa12.33□□□□□ -0.44
VRK3-218ENST00000600031 H3BP45 60 aa12.33□□□□□ -0.44
VRK3-218ENST00000600031 S1PR2O95136 353 aa12.33□□□□□ -0.44
VRK3-218ENST00000600031 FABP1P07148 127 aa12.33□□□□□ -0.44
VRK3-218ENST00000600031 SERF2P84101 59 aa12.33□□□□□ -0.44
VRK3-218ENST00000600031 PAX2Q02962 417 aa12.33□□□□□ -0.44
VRK3-218ENST00000600031 ELOBQ15370 118 aa12.33□□□□□ -0.44
VRK3-218ENST00000600031 IZUMO4Q1ZYL8 232 aa12.33□□□□□ -0.44
VRK3-218ENST00000600031 Q6ZRM9 215 aa12.33□□□□□ -0.44
VRK3-218ENST00000600031 TCTEX1D1Q8N7M0 179 aa12.33□□□□□ -0.44
VRK3-218ENST00000600031 OR10X1Q8NGY0 326 aa12.33□□□□□ -0.44
VRK3-218ENST00000600031 DDB2Q92466 427 aa12.33□□□□□ -0.44
VRK3-218ENST00000600031 S1PR3Q99500 378 aa12.33□□□□□ -0.44
VRK3-218ENST00000600031 NIT2Q9NQR4 276 aa12.33□□□□□ -0.44
VRK3-218ENST00000600031 ZNF727A8MUV8 499 aa12.32□□□□□ -0.44
VRK3-218ENST00000600031 FCGR3BO75015 233 aa12.32□□□□□ -0.44
VRK3-218ENST00000600031 PNRC1Q12796 327 aaPredicted RBP12.32□□□□□ -0.44
VRK3-218ENST00000600031 KIAA0141Q14154 515 aaPredicted RBP12.32□□□□□ -0.44
VRK3-218ENST00000600031 ZNF833PQ6ZTB9 187 aa12.32□□□□□ -0.44
VRK3-218ENST00000600031 ZNF383Q8NA42 475 aa12.32□□□□□ -0.44
VRK3-218ENST00000600031 OR51M1Q9H341 326 aa12.32□□□□□ -0.44
VRK3-218ENST00000600031 ABCA12Q86UK0 2595 aa12.32□□□□□ -0.44
VRK3-218ENST00000600031 FAM90A26D6RGX4 464 aa12.32□□□□□ -0.44
VRK3-218ENST00000600031 M0R1W7 72 aa12.32□□□□□ -0.44
VRK3-218ENST00000600031 CLN5O75503 358 aa12.32□□□□□ -0.44
VRK3-218ENST00000600031 FBP1P09467 338 aa12.32□□□□□ -0.44
VRK3-218ENST00000600031 HOXA5P20719 270 aa12.32□□□□□ -0.44
VRK3-218ENST00000600031 COX7A1P24310 79 aa12.32□□□□□ -0.44
VRK3-218ENST00000600031 DIAPH2-AS1Q14236 149 aa12.32□□□□□ -0.44
VRK3-218ENST00000600031 LRRC75BQ2VPJ9 315 aa12.32□□□□□ -0.44
VRK3-218ENST00000600031 P2RX4Q99571 388 aa12.32□□□□□ -0.44
VRK3-218ENST00000600031 RPRMQ9NS64 109 aa12.32□□□□□ -0.44
VRK3-218ENST00000600031 ANKRD17O75179 2603 aaKnown RBP12.32□□□□□ -0.44
VRK3-218ENST00000600031 ENSAO43768 121 aaKnown RBP12.31□□□□□ -0.44
VRK3-218ENST00000600031 CT45A6P0DMU7 189 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms