RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 IDO2Q6ZQW0 420 aa11.15□□□□□ -0.62
IRF3-223ENST00000599223 TMEM17Q86X19 198 aa11.15□□□□□ -0.62
IRF3-223ENST00000599223 ADAD2Q8NCV1 583 aaKnown RBP11.15□□□□□ -0.62
IRF3-223ENST00000599223 BVESQ8NE79 360 aa11.15□□□□□ -0.62
IRF3-223ENST00000599223 OR4A4PQ8NGN8 299 aa11.15□□□□□ -0.62
IRF3-223ENST00000599223 TRBV6-7A0A0A0MS04 114 aa11.14□□□□□ -0.63
IRF3-223ENST00000599223 A0A0G2JLM5 398 aa11.14□□□□□ -0.63
IRF3-223ENST00000599223 INMT-MINDY4F8WBC2 141 aa11.14□□□□□ -0.63
IRF3-223ENST00000599223 BRI3O95415 125 aa11.14□□□□□ -0.63
IRF3-223ENST00000599223 CD3DP04234 171 aa11.14□□□□□ -0.63
IRF3-223ENST00000599223 TCRBP04435 133 aa11.14□□□□□ -0.63
IRF3-223ENST00000599223 DTYMKP23919 212 aa11.14□□□□□ -0.63
IRF3-223ENST00000599223 HLA-DMAP28067 261 aa11.14□□□□□ -0.63
IRF3-223ENST00000599223 RBMS2Q15434 407 aaKnown RBP11.14□□□□□ -0.63
IRF3-223ENST00000599223 TMEM177Q53S58 311 aa11.14□□□□□ -0.63
IRF3-223ENST00000599223 OR4C16Q8NGL9 310 aa11.14□□□□□ -0.63
IRF3-223ENST00000599223 DDB2Q92466 427 aa11.14□□□□□ -0.63
IRF3-223ENST00000599223 PRRT1Q99946 306 aa11.14□□□□□ -0.63
IRF3-223ENST00000599223 SPATA25Q9BR10 227 aa11.14□□□□□ -0.63
IRF3-223ENST00000599223 COA4Q9NYJ1 87 aa11.14□□□□□ -0.63
IRF3-223ENST00000599223 PEF1Q9UBV8 284 aaKnown RBP11.14□□□□□ -0.63
IRF3-223ENST00000599223 ZNF230Q9UIE0 474 aaPredicted RBP11.14□□□□□ -0.63
IRF3-223ENST00000599223 IGKV1D-8A0A087WSZ0 117 aa11.13□□□□□ -0.63
IRF3-223ENST00000599223 SHOXO15266 292 aa11.13□□□□□ -0.63
IRF3-223ENST00000599223 PRH1P02810 166 aa11.13□□□□□ -0.63
IRF3-223ENST00000599223 H2AFB2P0C5Z0 115 aa11.13□□□□□ -0.63
IRF3-223ENST00000599223 EDN2P20800 178 aa11.13□□□□□ -0.63
IRF3-223ENST00000599223 ARPC4P59998 168 aa11.13□□□□□ -0.63
IRF3-223ENST00000599223 C10orf55Q5SWW7 151 aa11.13□□□□□ -0.63
IRF3-223ENST00000599223 HOGA1Q86XE5 327 aa11.13□□□□□ -0.63
IRF3-223ENST00000599223 OR5H2Q8NGV7 314 aa11.13□□□□□ -0.63
IRF3-223ENST00000599223 MARVELD1Q9BSK0 173 aa11.13□□□□□ -0.63
IRF3-223ENST00000599223 ST6GALNAC5Q9BVH7 336 aa11.13□□□□□ -0.63
IRF3-223ENST00000599223 NUDT15Q9NV35 164 aa11.13□□□□□ -0.63
IRF3-223ENST00000599223 MSGN1A6NI15 193 aa11.12□□□□□ -0.63
IRF3-223ENST00000599223 LINC00473A8K010 186 aa11.12□□□□□ -0.63
IRF3-223ENST00000599223 BMPR1BO00238 502 aa11.12□□□□□ -0.63
IRF3-223ENST00000599223 SSX5O60225 188 aa11.12□□□□□ -0.63
IRF3-223ENST00000599223 CD74P04233 296 aa11.12□□□□□ -0.63
IRF3-223ENST00000599223 FCER2P06734 321 aa11.12□□□□□ -0.63
IRF3-223ENST00000599223 AADACP22760 399 aa11.12□□□□□ -0.63
IRF3-223ENST00000599223 LGALS7P47929 136 aa11.12□□□□□ -0.63
IRF3-223ENST00000599223 CCR6P51684 374 aa11.12□□□□□ -0.63
IRF3-223ENST00000599223 PRSS8Q16651 343 aa11.12□□□□□ -0.63
IRF3-223ENST00000599223 BEST4Q8NFU0 473 aa11.12□□□□□ -0.63
IRF3-223ENST00000599223 OR10J5Q8NHC4 309 aa11.12□□□□□ -0.63
IRF3-223ENST00000599223 SRSF12Q8WXF0 261 aaKnown RBP11.12□□□□□ -0.63
IRF3-223ENST00000599223 PPP1R14BQ96C90 147 aa11.12□□□□□ -0.63
IRF3-223ENST00000599223 FAM110AQ9BQ89 295 aa11.12□□□□□ -0.63
IRF3-223ENST00000599223 SLC25A21Q9BQT8 299 aaPredicted RBP11.12□□□□□ -0.63
IRF3-223ENST00000599223 WFDC10AQ9H1F0 79 aa11.12□□□□□ -0.63
IRF3-223ENST00000599223 C20orf85Q9H1P6 137 aa11.12□□□□□ -0.63
IRF3-223ENST00000599223 PLEKHA3Q9HB20 300 aa11.12□□□□□ -0.63
IRF3-223ENST00000599223 ELF5Q9UKW6 265 aaPredicted RBP11.12□□□□□ -0.63
IRF3-223ENST00000599223 TRAV6A0A075B6T7 132 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 H0Y980 276 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 PRAF2O60831 178 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 OR2A4O95047 310 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 NDUFB6O95139 128 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 CRYZL1O95825 349 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 OR9G9P0C7N8 305 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 NAT1P18440 290 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 DUTP33316 252 aaKnown RBP11.11□□□□□ -0.63
IRF3-223ENST00000599223 BTCP35070 178 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 HRH1P35367 487 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 MECP2P51608 486 aaKnown RBP11.11□□□□□ -0.63
IRF3-223ENST00000599223 UBE2KP61086 200 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 TSPAN5P62079 268 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 RHOGP84095 191 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 EXOSC2Q13868 293 aaKnown RBP11.11□□□□□ -0.63
IRF3-223ENST00000599223 TNXAQ16473 311 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 TATDN3Q17R31 274 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 RTL8BQ17RB0 113 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 RPEL1Q2QD12 228 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 SCGB2B2Q4G0G5 96 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 LCN12Q6JVE5 192 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 C19orf35Q6ZS72 473 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 H1FOOQ8IZA3 346 aaPredicted RBP11.11□□□□□ -0.63
IRF3-223ENST00000599223 ARRDC1Q8N5I2 433 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 GVQW1Q8N7I0 195 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 OR51S1Q8NGJ8 323 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 USMG5Q96IX5 58 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 TMEM68Q96MH6 324 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 SCGB3A2Q96PL1 93 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 PHB2Q99623 299 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 GINS4Q9BRT9 223 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 GPN1Q9HCN4 374 aaPredicted RBP11.11□□□□□ -0.63
IRF3-223ENST00000599223 SIGLEC8Q9NYZ4 499 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 ANAPC10Q9UM13 185 aa11.11□□□□□ -0.63
IRF3-223ENST00000599223 M0QYG6 137 aa11.1□□□□□ -0.63
IRF3-223ENST00000599223 SAA1P0DJI8 122 aaPredicted RBP11.1□□□□□ -0.63
IRF3-223ENST00000599223 TAGLNQ01995 201 aaKnown RBP11.1□□□□□ -0.63
IRF3-223ENST00000599223 FAAP20Q6NZ36 180 aa11.1□□□□□ -0.63
IRF3-223ENST00000599223 LINC00322Q6ZN03 302 aaPredicted RBP11.1□□□□□ -0.63
IRF3-223ENST00000599223 GTSCR1Q86UQ5 136 aa11.1□□□□□ -0.63
IRF3-223ENST00000599223 OR5AP2Q8NGF4 316 aa11.1□□□□□ -0.63
IRF3-223ENST00000599223 ZNF430Q9H8G1 570 aaPredicted RBP11.1□□□□□ -0.63
IRF3-223ENST00000599223 TRBV9A0A0B4J1U6 114 aa11.09□□□□□ -0.63
IRF3-223ENST00000599223 DIRAS3O95661 229 aa11.09□□□□□ -0.63
IRF3-223ENST00000599223 PMP2P02689 132 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms