RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 APOA1P02647 267 aa17.49■□□□□ 0.39
SSBP4-205ENST00000598159 DEFA4P12838 97 aa17.49■□□□□ 0.39
SSBP4-205ENST00000598159 NCS1P62166 190 aa17.49■□□□□ 0.39
SSBP4-205ENST00000598159 LYSMD2Q8IV50 215 aa17.49■□□□□ 0.39
SSBP4-205ENST00000598159 DMBX1Q8NFW5 382 aa17.49■□□□□ 0.39
SSBP4-205ENST00000598159 SRSF8Q9BRL6 282 aaKnown RBP17.49■□□□□ 0.39
SSBP4-205ENST00000598159 COMMD5Q9GZQ3 224 aa17.49■□□□□ 0.39
SSBP4-205ENST00000598159 COMMD9Q9P000 198 aa17.49■□□□□ 0.39
SSBP4-205ENST00000598159 CGB1A6NKQ9 187 aa17.48■□□□□ 0.39
SSBP4-205ENST00000598159 NDUFB8O95169 186 aa17.48■□□□□ 0.39
SSBP4-205ENST00000598159 EIF4EP06730 217 aaKnown RBP17.48■□□□□ 0.39
SSBP4-205ENST00000598159 MYOD1P15172 320 aa17.48■□□□□ 0.39
SSBP4-205ENST00000598159 OR2B8PP59922 312 aa17.48■□□□□ 0.39
SSBP4-205ENST00000598159 VBP1P61758 197 aa17.48■□□□□ 0.39
SSBP4-205ENST00000598159 CMTM1Q8IZ96 169 aa17.48■□□□□ 0.39
SSBP4-205ENST00000598159 GPX8Q8TED1 209 aa17.48■□□□□ 0.39
SSBP4-205ENST00000598159 EEF1AKMT3Q96AZ1 226 aa17.48■□□□□ 0.39
SSBP4-205ENST00000598159 RCHY1Q96PM5 261 aa17.48■□□□□ 0.39
SSBP4-205ENST00000598159 TRAV3A0A0B4J244 114 aa17.47■□□□□ 0.39
SSBP4-205ENST00000598159 PPP5D1E7EU14 171 aa17.47■□□□□ 0.39
SSBP4-205ENST00000598159 LGALS9O00182 355 aa17.47■□□□□ 0.39
SSBP4-205ENST00000598159 F2RP25116 425 aa17.47■□□□□ 0.39
SSBP4-205ENST00000598159 RORCP51449 518 aa17.47■□□□□ 0.39
SSBP4-205ENST00000598159 C19orf35Q6ZS72 473 aa17.47■□□□□ 0.39
SSBP4-205ENST00000598159 GTSCR1Q86UQ5 136 aa17.47■□□□□ 0.39
SSBP4-205ENST00000598159 GPHB5Q86YW7 130 aa17.47■□□□□ 0.39
SSBP4-205ENST00000598159 SCPEP1Q9HB40 452 aa17.47■□□□□ 0.39
SSBP4-205ENST00000598159 TMEM140Q9NV12 185 aa17.47■□□□□ 0.39
SSBP4-205ENST00000598159 S1PR2O95136 353 aa17.46■□□□□ 0.39
SSBP4-205ENST00000598159 OR2C1O95371 312 aa17.46■□□□□ 0.39
SSBP4-205ENST00000598159 ERVK-16P61578 105 aa17.46■□□□□ 0.39
SSBP4-205ENST00000598159 THOC7Q6I9Y2 204 aaKnown RBP17.46■□□□□ 0.39
SSBP4-205ENST00000598159 LPCAT3Q6P1A2 487 aa17.46■□□□□ 0.39
SSBP4-205ENST00000598159 CLEC19AQ6UXS0 136 aa17.46■□□□□ 0.39
SSBP4-205ENST00000598159 CADM3Q8N126 398 aa17.46■□□□□ 0.39
SSBP4-205ENST00000598159 DGCR14Q96DF8 476 aaKnown RBP17.46■□□□□ 0.39
SSBP4-205ENST00000598159 CXorf58Q96LI9 332 aa17.46■□□□□ 0.39
SSBP4-205ENST00000598159 THAP7Q9BT49 309 aaPredicted RBP17.46■□□□□ 0.39
SSBP4-205ENST00000598159 IGLV11-55A0A075B6I3 123 aa17.45■□□□□ 0.38
SSBP4-205ENST00000598159 TRBV7-1A0A0A6YYK4 115 aa17.45■□□□□ 0.38
SSBP4-205ENST00000598159 C3orf84H3BNL1 204 aa17.45■□□□□ 0.38
SSBP4-205ENST00000598159 GPR31O00270 319 aa17.45■□□□□ 0.38
SSBP4-205ENST00000598159 REG1AP05451 166 aa17.45■□□□□ 0.38
SSBP4-205ENST00000598159 HLA-DMAP28067 261 aa17.45■□□□□ 0.38
SSBP4-205ENST00000598159 HRH1P35367 487 aa17.45■□□□□ 0.38
SSBP4-205ENST00000598159 ARL3P36405 182 aa17.45■□□□□ 0.38
SSBP4-205ENST00000598159 TSPAN5P62079 268 aa17.45■□□□□ 0.38
SSBP4-205ENST00000598159 FAM106AQ4KMX7 169 aa17.45■□□□□ 0.38
SSBP4-205ENST00000598159 THYN1Q9P016 225 aa17.45■□□□□ 0.38
SSBP4-205ENST00000598159 TENM3Q9P273 2699 aa17.44■□□□□ 0.38
SSBP4-205ENST00000598159 IZUMO1RA6ND01 250 aa17.44■□□□□ 0.38
SSBP4-205ENST00000598159 IGHV3-23P01764 117 aa17.44■□□□□ 0.38
SSBP4-205ENST00000598159 HLA-AP01891 365 aaKnown RBP17.44■□□□□ 0.38
SSBP4-205ENST00000598159 RLN1P04808 185 aa17.44■□□□□ 0.38
SSBP4-205ENST00000598159 LPAR6P43657 344 aa17.44■□□□□ 0.38
SSBP4-205ENST00000598159 MZT2AQ6P582 158 aa17.44■□□□□ 0.38
SSBP4-205ENST00000598159 ADAMTSL5Q6ZMM2 481 aa17.44■□□□□ 0.38
SSBP4-205ENST00000598159 HSD17B13Q7Z5P4 300 aaPredicted RBP17.44■□□□□ 0.38
SSBP4-205ENST00000598159 CCDC140Q96MF4 163 aa17.44■□□□□ 0.38
SSBP4-205ENST00000598159 TM2D3Q9BRN9 247 aa17.44■□□□□ 0.38
SSBP4-205ENST00000598159 QTRT1Q9BXR0 403 aaKnown RBP17.44■□□□□ 0.38
SSBP4-205ENST00000598159 IGLC7A0M8Q6 106 aa17.43■□□□□ 0.38
SSBP4-205ENST00000598159 C2orf70A6NJV1 201 aa17.43■□□□□ 0.38
SSBP4-205ENST00000598159 MARCH11A6NNE9 402 aa17.43■□□□□ 0.38
SSBP4-205ENST00000598159 CYB5BO43169 146 aa17.43■□□□□ 0.38
SSBP4-205ENST00000598159 TRAPPC2P0DI81 140 aa17.43■□□□□ 0.38
SSBP4-205ENST00000598159 TRAPPC2BP0DI82 140 aa17.43■□□□□ 0.38
SSBP4-205ENST00000598159 ELK1P19419 428 aa17.43■□□□□ 0.38
SSBP4-205ENST00000598159 S100GP29377 79 aa17.43■□□□□ 0.38
SSBP4-205ENST00000598159 DEFB114Q30KQ6 69 aa17.43■□□□□ 0.38
SSBP4-205ENST00000598159 CD300EQ496F6 205 aaPredicted RBP17.43■□□□□ 0.38
SSBP4-205ENST00000598159 LAX1Q8IWV1 398 aa17.43■□□□□ 0.38
SSBP4-205ENST00000598159 DYNLRB2Q8TF09 96 aa17.43■□□□□ 0.38
SSBP4-205ENST00000598159 FCAMRQ8WWV6 532 aa17.43■□□□□ 0.38
SSBP4-205ENST00000598159 TUBA4BQ9H853 241 aa17.43■□□□□ 0.38
SSBP4-205ENST00000598159 TECRQ9NZ01 308 aaKnown RBP17.43■□□□□ 0.38
SSBP4-205ENST00000598159 TEX50A0A1B0GTY4 177 aa17.42■□□□□ 0.38
SSBP4-205ENST00000598159 HPGDSO60760 199 aa17.42■□□□□ 0.38
SSBP4-205ENST00000598159 CLEC3BP05452 202 aa17.42■□□□□ 0.38
SSBP4-205ENST00000598159 FOLR2P14207 255 aa17.42■□□□□ 0.38
SSBP4-205ENST00000598159 RPA2P15927 270 aa17.42■□□□□ 0.38
SSBP4-205ENST00000598159 ZNF585BQ52M93 769 aa17.42■□□□□ 0.38
SSBP4-205ENST00000598159 SNX29P2Q8IUI4 249 aa17.42■□□□□ 0.38
SSBP4-205ENST00000598159 OR1L8Q8NGR8 309 aa17.42■□□□□ 0.38
SSBP4-205ENST00000598159 FXYD6Q9H0Q3 95 aa17.42■□□□□ 0.38
SSBP4-205ENST00000598159 FAM212BQ9NTI7 297 aaPredicted RBP17.42■□□□□ 0.38
SSBP4-205ENST00000598159 S4R3C0 116 aa17.42■□□□□ 0.38
SSBP4-205ENST00000598159 KMT2CQ8NEZ4 4911 aaKnown RBP17.42■□□□□ 0.38
SSBP4-205ENST00000598159 SNAPC5O75971 98 aa17.41■□□□□ 0.38
SSBP4-205ENST00000598159 KRASP01116 189 aa17.41■□□□□ 0.38
SSBP4-205ENST00000598159 RCVRNP35243 200 aa17.41■□□□□ 0.38
SSBP4-205ENST00000598159 AP3S1Q92572 193 aa17.41■□□□□ 0.38
SSBP4-205ENST00000598159 HUWE1Q7Z6Z7 4374 aaKnown RBP17.4■□□□□ 0.38
SSBP4-205ENST00000598159 ZNF785A8K8V0 405 aa17.4■□□□□ 0.38
SSBP4-205ENST00000598159 SERPINE2P07093 398 aa17.4■□□□□ 0.38
SSBP4-205ENST00000598159 CBLN1P23435 193 aa17.4■□□□□ 0.38
SSBP4-205ENST00000598159 PTBP1P26599 531 aaKnown RBP eCLIP17.4■□□□□ 0.38
SSBP4-205ENST00000598159 UCP3P55916 312 aa17.4■□□□□ 0.38
SSBP4-205ENST00000598159 OR10W1Q8NGF6 305 aa17.4■□□□□ 0.38
SSBP4-205ENST00000598159 NDUFA4L2Q9NRX3 87 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms