RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 ELK1P19419 428 aa11.46□□□□□ -0.57
LIG1-215ENST00000597901 F2RP25116 425 aa11.46□□□□□ -0.57
LIG1-215ENST00000597901 RORCP51449 518 aa11.46□□□□□ -0.57
LIG1-215ENST00000597901 OR2B8PP59922 312 aa11.46□□□□□ -0.57
LIG1-215ENST00000597901 FAM209BQ5JX69 171 aa11.46□□□□□ -0.57
LIG1-215ENST00000597901 SORL1Q92673 2214 aa11.45□□□□□ -0.58
LIG1-215ENST00000597901 PPP5D1E7EU14 171 aa11.45□□□□□ -0.58
LIG1-215ENST00000597901 HPGDSO60760 199 aa11.45□□□□□ -0.58
LIG1-215ENST00000597901 GGCTO75223 188 aaKnown RBP11.45□□□□□ -0.58
LIG1-215ENST00000597901 S1PR2O95136 353 aa11.45□□□□□ -0.58
LIG1-215ENST00000597901 REG1AP05451 166 aa11.45□□□□□ -0.58
LIG1-215ENST00000597901 DEFA4P12838 97 aa11.45□□□□□ -0.58
LIG1-215ENST00000597901 RPA2P15927 270 aa11.45□□□□□ -0.58
LIG1-215ENST00000597901 HIST1H1BP16401 226 aaKnown RBP11.45□□□□□ -0.58
LIG1-215ENST00000597901 LPAR6P43657 344 aa11.45□□□□□ -0.58
LIG1-215ENST00000597901 ADAMTSL5Q6ZMM2 481 aa11.45□□□□□ -0.58
LIG1-215ENST00000597901 SNX29P2Q8IUI4 249 aa11.45□□□□□ -0.58
LIG1-215ENST00000597901 DMBX1Q8NFW5 382 aa11.45□□□□□ -0.58
LIG1-215ENST00000597901 COMMD5Q9GZQ3 224 aa11.45□□□□□ -0.58
LIG1-215ENST00000597901 NAA50Q9GZZ1 169 aaKnown RBP11.45□□□□□ -0.58
LIG1-215ENST00000597901 SCPEP1Q9HB40 452 aa11.45□□□□□ -0.58
LIG1-215ENST00000597901 TMEM140Q9NV12 185 aa11.45□□□□□ -0.58
LIG1-215ENST00000597901 C19orf73Q9NVV2 129 aa11.45□□□□□ -0.58
LIG1-215ENST00000597901 TEX50A0A1B0GTY4 177 aa11.44□□□□□ -0.58
LIG1-215ENST00000597901 IZUMO1RA6ND01 250 aa11.44□□□□□ -0.58
LIG1-215ENST00000597901 A8MZ25 164 aa11.44□□□□□ -0.58
LIG1-215ENST00000597901 IGHV3-23P01764 117 aa11.44□□□□□ -0.58
LIG1-215ENST00000597901 HLA-AP01891 365 aaKnown RBP11.44□□□□□ -0.58
LIG1-215ENST00000597901 IGHV4-30-4P0DP06 118 aa11.44□□□□□ -0.58
LIG1-215ENST00000597901 HRH1P35367 487 aa11.44□□□□□ -0.58
LIG1-215ENST00000597901 TSPAN5P62079 268 aa11.44□□□□□ -0.58
LIG1-215ENST00000597901 CTF1Q16619 201 aa11.44□□□□□ -0.58
LIG1-215ENST00000597901 ZNF585BQ52M93 769 aa11.44□□□□□ -0.58
LIG1-215ENST00000597901 CLEC19AQ6UXS0 136 aa11.44□□□□□ -0.58
LIG1-215ENST00000597901 CMTM1Q8IZ96 169 aa11.44□□□□□ -0.58
LIG1-215ENST00000597901 FCAMRQ8WWV6 532 aa11.44□□□□□ -0.58
LIG1-215ENST00000597901 DGCR14Q96DF8 476 aaKnown RBP11.44□□□□□ -0.58
LIG1-215ENST00000597901 COMMD9Q9P000 198 aa11.44□□□□□ -0.58
LIG1-215ENST00000597901 S4R3C0 116 aa11.44□□□□□ -0.58
LIG1-215ENST00000597901 IGLV11-55A0A075B6I3 123 aa11.43□□□□□ -0.58
LIG1-215ENST00000597901 IGLC7A0M8Q6 106 aa11.43□□□□□ -0.58
LIG1-215ENST00000597901 GPR31O00270 319 aa11.43□□□□□ -0.58
LIG1-215ENST00000597901 RLN1P04808 185 aa11.43□□□□□ -0.58
LIG1-215ENST00000597901 FGF2P09038 288 aa11.43□□□□□ -0.58
LIG1-215ENST00000597901 SMIM18P0DKX4 95 aa11.43□□□□□ -0.58
LIG1-215ENST00000597901 LCN12Q6JVE5 192 aa11.43□□□□□ -0.58
LIG1-215ENST00000597901 LPCAT3Q6P1A2 487 aa11.43□□□□□ -0.58
LIG1-215ENST00000597901 MZT2AQ6P582 158 aa11.43□□□□□ -0.58
LIG1-215ENST00000597901 GPHB5Q86YW7 130 aa11.43□□□□□ -0.58
LIG1-215ENST00000597901 SGPP2Q8IWX5 399 aa11.43□□□□□ -0.58
LIG1-215ENST00000597901 Q8N402 240 aa11.43□□□□□ -0.58
LIG1-215ENST00000597901 OR10W1Q8NGF6 305 aa11.43□□□□□ -0.58
LIG1-215ENST00000597901 EEF1AKMT3Q96AZ1 226 aa11.43□□□□□ -0.58
LIG1-215ENST00000597901 SRSF8Q9BRL6 282 aaKnown RBP11.43□□□□□ -0.58
LIG1-215ENST00000597901 THAP7Q9BT49 309 aaPredicted RBP11.43□□□□□ -0.58
LIG1-215ENST00000597901 C3orf84H3BNL1 204 aa11.42□□□□□ -0.58
LIG1-215ENST00000597901 LGALS9O00182 355 aa11.42□□□□□ -0.58
LIG1-215ENST00000597901 KRASP01116 189 aa11.42□□□□□ -0.58
LIG1-215ENST00000597901 CLEC3BP05452 202 aa11.42□□□□□ -0.58
LIG1-215ENST00000597901 TRAPPC2P0DI81 140 aa11.42□□□□□ -0.58
LIG1-215ENST00000597901 TRAPPC2BP0DI82 140 aa11.42□□□□□ -0.58
LIG1-215ENST00000597901 ZNF182P17025 639 aaPredicted RBP11.42□□□□□ -0.58
LIG1-215ENST00000597901 ARL3P36405 182 aa11.42□□□□□ -0.58
LIG1-215ENST00000597901 ERVK-16P61578 105 aa11.42□□□□□ -0.58
LIG1-215ENST00000597901 DEFB114Q30KQ6 69 aa11.42□□□□□ -0.58
LIG1-215ENST00000597901 GPR107Q5VW38 600 aa11.42□□□□□ -0.58
LIG1-215ENST00000597901 CADM3Q8N126 398 aa11.42□□□□□ -0.58
LIG1-215ENST00000597901 OR2K2Q8NGT1 345 aa11.42□□□□□ -0.58
LIG1-215ENST00000597901 CCDC140Q96MF4 163 aa11.42□□□□□ -0.58
LIG1-215ENST00000597901 RCHY1Q96PM5 261 aa11.42□□□□□ -0.58
LIG1-215ENST00000597901 QTRT1Q9BXR0 403 aaKnown RBP11.42□□□□□ -0.58
LIG1-215ENST00000597901 FXYD6Q9H0Q3 95 aa11.42□□□□□ -0.58
LIG1-215ENST00000597901 ZMAT4Q9H898 229 aa11.42□□□□□ -0.58
LIG1-215ENST00000597901 TRBV7-1A0A0A6YYK4 115 aa11.41□□□□□ -0.58
LIG1-215ENST00000597901 C2orf70A6NJV1 201 aa11.41□□□□□ -0.58
LIG1-215ENST00000597901 MARCH11A6NNE9 402 aa11.41□□□□□ -0.58
LIG1-215ENST00000597901 ZNF785A8K8V0 405 aa11.41□□□□□ -0.58
LIG1-215ENST00000597901 FAM25AB3EWG3 89 aa11.41□□□□□ -0.58
LIG1-215ENST00000597901 FAM25CB3EWG5 89 aa11.41□□□□□ -0.58
LIG1-215ENST00000597901 FAM25GB3EWG6 89 aa11.41□□□□□ -0.58
LIG1-215ENST00000597901 GABARAPO95166 117 aa11.41□□□□□ -0.58
LIG1-215ENST00000597901 FOLR2P14207 255 aa11.41□□□□□ -0.58
LIG1-215ENST00000597901 RCVRNP35243 200 aa11.41□□□□□ -0.58
LIG1-215ENST00000597901 UCP3P55916 312 aa11.41□□□□□ -0.58
LIG1-215ENST00000597901 CD300EQ496F6 205 aaPredicted RBP11.41□□□□□ -0.58
LIG1-215ENST00000597901 FAM106AQ4KMX7 169 aa11.41□□□□□ -0.58
LIG1-215ENST00000597901 PHLDA2Q53GA4 152 aa11.41□□□□□ -0.58
LIG1-215ENST00000597901 OR1L8Q8NGR8 309 aa11.41□□□□□ -0.58
LIG1-215ENST00000597901 CXorf58Q96LI9 332 aa11.41□□□□□ -0.58
LIG1-215ENST00000597901 ZNF320A2RRD8 509 aa11.4□□□□□ -0.58
LIG1-215ENST00000597901 MFSD2BA6NFX1 497 aa11.4□□□□□ -0.58
LIG1-215ENST00000597901 SNAPC5O75971 98 aa11.4□□□□□ -0.58
LIG1-215ENST00000597901 SERPINE2P07093 398 aa11.4□□□□□ -0.58
LIG1-215ENST00000597901 OR13C7P0DN81 318 aa11.4□□□□□ -0.58
LIG1-215ENST00000597901 EDN2P20800 178 aa11.4□□□□□ -0.58
LIG1-215ENST00000597901 G6PCP35575 357 aa11.4□□□□□ -0.58
LIG1-215ENST00000597901 THOC7Q6I9Y2 204 aaKnown RBP11.4□□□□□ -0.58
LIG1-215ENST00000597901 GTSCR1Q86UQ5 136 aa11.4□□□□□ -0.58
LIG1-215ENST00000597901 AP3S1Q92572 193 aa11.4□□□□□ -0.58
LIG1-215ENST00000597901 NDUFA4L2Q9NRX3 87 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms