RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	IGLV11-55	A0A075B6I3	123 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	TRAV18	A0A075B6X5	111 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	TRAV3	A0A0B4J244	114 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	IGHV3-35	A0A0C4DH35	117 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776		A8MWP6	167 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	SULT1C2	O00338	296 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	SCGN	O76038	276 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	DHFR	P00374	187 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	HRAS	P01112	189 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	CLEC2L	P0C7M8	214 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	FCGR2C	P31995	323 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	GPR183	P32249	361 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	OR2B8P	P59922	312 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	ARPC4	P59998	168 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	GABARAPL2	P60520	117 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	MXD1	Q05195	221 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	FAM106A	Q4KMX7	169 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	SLC16A13	Q7RTY0	426 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	SPAG16	Q8N0X2	631 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	SPART	Q8N0X7	666 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	BEST4	Q8NFU0	473 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	OR52B4	Q8NGK2	314 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	OR5H6	Q8NGV6	325 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	SLC25A38	Q96DW6	304 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	GGTLC1	Q9BX51	225 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	RNF167	Q9H6Y7	350 aa		7.88	□□□□□ -1.15
LSM4-205	ENST00000597776	IGLC7	A0M8Q6	106 aa		7.87	□□□□□ -1.15
LSM4-205	ENST00000597776	PPY	P01298	95 aa		7.87	□□□□□ -1.15
LSM4-205	ENST00000597776	CLEC3B	P05452	202 aa		7.87	□□□□□ -1.15
LSM4-205	ENST00000597776	HIST1H1B	P16401	226 aa	Known RBP	7.87	□□□□□ -1.15
LSM4-205	ENST00000597776	SDC2	P34741	201 aa		7.87	□□□□□ -1.15
LSM4-205	ENST00000597776	FXYD4	P59646	89 aa		7.87	□□□□□ -1.15
LSM4-205	ENST00000597776	KLK9	Q2XQG4	91 aa		7.87	□□□□□ -1.15
LSM4-205	ENST00000597776	ZNF773	Q6PK81	442 aa		7.87	□□□□□ -1.15
LSM4-205	ENST00000597776	TPRA1	Q86W33	373 aa		7.87	□□□□□ -1.15
LSM4-205	ENST00000597776	OVOL2	Q9BRP0	275 aa		7.87	□□□□□ -1.15
LSM4-205	ENST00000597776	SLC5A7	Q9GZV3	580 aa		7.87	□□□□□ -1.15
LSM4-205	ENST00000597776	BET1L	Q9NYM9	111 aa		7.87	□□□□□ -1.15
LSM4-205	ENST00000597776	KLK9	Q9UKQ9	250 aa		7.87	□□□□□ -1.15
LSM4-205	ENST00000597776	RAB26	Q9ULW5	256 aa		7.87	□□□□□ -1.15
LSM4-205	ENST00000597776	SSR3	Q9UNL2	185 aa		7.87	□□□□□ -1.15
LSM4-205	ENST00000597776	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	7.86	□□□□□ -1.15
LSM4-205	ENST00000597776	TRBV7-1	A0A0A6YYK4	115 aa		7.86	□□□□□ -1.15
LSM4-205	ENST00000597776	UPK2	O00526	184 aa		7.86	□□□□□ -1.15
LSM4-205	ENST00000597776	MRPS14	O60783	128 aa	Known RBP	7.86	□□□□□ -1.15
LSM4-205	ENST00000597776	S1PR2	O95136	353 aa		7.86	□□□□□ -1.15
LSM4-205	ENST00000597776	RPA2	P15927	270 aa		7.86	□□□□□ -1.15
LSM4-205	ENST00000597776	MSMO1	Q15800	293 aa		7.86	□□□□□ -1.15
LSM4-205	ENST00000597776	ZNF585B	Q52M93	769 aa		7.86	□□□□□ -1.15
LSM4-205	ENST00000597776	IDNK	Q5T6J7	187 aa		7.86	□□□□□ -1.15
LSM4-205	ENST00000597776	TMEM17	Q86X19	198 aa		7.86	□□□□□ -1.15
LSM4-205	ENST00000597776	HOGA1	Q86XE5	327 aa		7.86	□□□□□ -1.15
LSM4-205	ENST00000597776	OR10W1	Q8NGF6	305 aa		7.86	□□□□□ -1.15
LSM4-205	ENST00000597776	OR51H1	Q8NH63	302 aa		7.86	□□□□□ -1.15
LSM4-205	ENST00000597776	OR4A5	Q8NH83	315 aa		7.86	□□□□□ -1.15
LSM4-205	ENST00000597776	ZNF502	Q8TBZ5	544 aa		7.86	□□□□□ -1.15
LSM4-205	ENST00000597776	CXorf58	Q96LI9	332 aa		7.86	□□□□□ -1.15
LSM4-205	ENST00000597776	LOC100506127	A0A0U1RQW1	187 aa		7.85	□□□□□ -1.15
LSM4-205	ENST00000597776	MEIS3P1	A6NDR6	274 aa		7.85	□□□□□ -1.15
LSM4-205	ENST00000597776	RBFOX2	O43251	390 aa	Known RBP eCLIP	7.85	□□□□□ -1.15
LSM4-205	ENST00000597776	TAS2R31	P59538	309 aa		7.85	□□□□□ -1.15
LSM4-205	ENST00000597776	EWSR1	Q01844	656 aa	Known RBP eCLIP	7.85	□□□□□ -1.15
LSM4-205	ENST00000597776	PMS2P11	Q13670	270 aa		7.85	□□□□□ -1.15
LSM4-205	ENST00000597776	POU2AF1	Q16633	256 aa		7.85	□□□□□ -1.15
LSM4-205	ENST00000597776	PLET1	Q6UQ28	207 aa		7.85	□□□□□ -1.15
LSM4-205	ENST00000597776	ZNF818P	Q6ZRF7	136 aa		7.85	□□□□□ -1.15
LSM4-205	ENST00000597776	DMBX1	Q8NFW5	382 aa		7.85	□□□□□ -1.15
LSM4-205	ENST00000597776	OR1L6	Q8NGR2	347 aa		7.85	□□□□□ -1.15
LSM4-205	ENST00000597776	FCGR1B	Q92637	280 aa		7.85	□□□□□ -1.15
LSM4-205	ENST00000597776	AIFM2	Q9BRQ8	373 aa		7.85	□□□□□ -1.15
LSM4-205	ENST00000597776	COMMD5	Q9GZQ3	224 aa		7.85	□□□□□ -1.15
LSM4-205	ENST00000597776	AUNIP	Q9H7T9	357 aa		7.85	□□□□□ -1.15
LSM4-205	ENST00000597776	TMEM140	Q9NV12	185 aa		7.85	□□□□□ -1.15
LSM4-205	ENST00000597776	ETV7	Q9Y603	341 aa		7.85	□□□□□ -1.15
LSM4-205	ENST00000597776	IGHV3-21	A0A0B4J1V1	117 aa		7.84	□□□□□ -1.15
LSM4-205	ENST00000597776	CXorf65	A6NEN9	183 aa		7.84	□□□□□ -1.15
LSM4-205	ENST00000597776	OR2T8	A6NH00	312 aa		7.84	□□□□□ -1.15
LSM4-205	ENST00000597776	TGOLN2	O43493	480 aa		7.84	□□□□□ -1.15
LSM4-205	ENST00000597776	HPRT1	P00492	218 aa		7.84	□□□□□ -1.15
LSM4-205	ENST00000597776	C8orf88	P0DMB2	117 aa		7.84	□□□□□ -1.15
LSM4-205	ENST00000597776	NQO2	P16083	231 aa		7.84	□□□□□ -1.15
LSM4-205	ENST00000597776	CATR1	Q13166	79 aa		7.84	□□□□□ -1.15
LSM4-205	ENST00000597776	ANKRD55	Q3KP44	614 aa		7.84	□□□□□ -1.15
LSM4-205	ENST00000597776	AADACL3	Q5VUY0	350 aa		7.84	□□□□□ -1.15
LSM4-205	ENST00000597776	RBPMS2	Q6ZRY4	209 aa	Known RBP	7.84	□□□□□ -1.15
LSM4-205	ENST00000597776	ZBTB34	Q8NCN2	500 aa		7.84	□□□□□ -1.15
LSM4-205	ENST00000597776	MARC2	Q969Z3	335 aa		7.84	□□□□□ -1.15
LSM4-205	ENST00000597776	QTRT1	Q9BXR0	403 aa	Known RBP	7.84	□□□□□ -1.15
LSM4-205	ENST00000597776	ZNF436	Q9C0F3	470 aa	Predicted RBP	7.84	□□□□□ -1.15
LSM4-205	ENST00000597776	UBQLN2	Q9UHD9	624 aa		7.84	□□□□□ -1.15
LSM4-205	ENST00000597776	UFC1	Q9Y3C8	167 aa		7.84	□□□□□ -1.15
LSM4-205	ENST00000597776	IGHV3OR16-8	A0A075B7F1	116 aa		7.83	□□□□□ -1.16
LSM4-205	ENST00000597776		A0A0A6YYH2	397 aa		7.83	□□□□□ -1.16
LSM4-205	ENST00000597776	TRAV25	A0A0B4J276	109 aa		7.83	□□□□□ -1.16
LSM4-205	ENST00000597776		A0A0J9YWU9	116 aa		7.83	□□□□□ -1.16
LSM4-205	ENST00000597776		A6NJ64	397 aa		7.83	□□□□□ -1.16
LSM4-205	ENST00000597776	RLN1	P04808	185 aa		7.83	□□□□□ -1.16
LSM4-205	ENST00000597776	OR13C7	P0DN81	318 aa		7.83	□□□□□ -1.16
LSM4-205	ENST00000597776	PTBP1	P26599	531 aa	Known RBP eCLIP	7.83	□□□□□ -1.16
LSM4-205	ENST00000597776	MFAP2	P55001	183 aa		7.83	□□□□□ -1.16

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