RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 PRRX1P54821 245 aa12.89□□□□□ -0.35
IRF3-219ENST00000597636 RBX1P62877 108 aa12.89□□□□□ -0.35
IRF3-219ENST00000597636 AARDQ4LEZ3 155 aa12.89□□□□□ -0.35
IRF3-219ENST00000597636 TMEM136Q6ZRR5 245 aa12.89□□□□□ -0.35
IRF3-219ENST00000597636 IGHV3-64DA0A0J9YX35 117 aa12.88□□□□□ -0.35
IRF3-219ENST00000597636 PRSS46E5RG02 174 aa12.88□□□□□ -0.35
IRF3-219ENST00000597636 Q0VFX4 171 aa12.88□□□□□ -0.35
IRF3-219ENST00000597636 KIAA1644Q3SXP7 199 aa12.88□□□□□ -0.35
IRF3-219ENST00000597636 LEMD1Q68G75 181 aa12.88□□□□□ -0.35
IRF3-219ENST00000597636 HSD17B10Q99714 261 aaKnown RBP12.88□□□□□ -0.35
IRF3-219ENST00000597636 SEPSECSQ9HD40 501 aaKnown RBP12.88□□□□□ -0.35
IRF3-219ENST00000597636 DPRXA6NFQ7 191 aa12.88□□□□□ -0.35
IRF3-219ENST00000597636 NKX6-3A6NJ46 265 aa12.88□□□□□ -0.35
IRF3-219ENST00000597636 ZNF324O75467 553 aaPredicted RBP12.88□□□□□ -0.35
IRF3-219ENST00000597636 REG1AP05451 166 aa12.88□□□□□ -0.35
IRF3-219ENST00000597636 C3orf79P0CE67 100 aa12.88□□□□□ -0.35
IRF3-219ENST00000597636 KLF3P57682 345 aaPredicted RBP12.88□□□□□ -0.35
IRF3-219ENST00000597636 SLC35E4Q6ICL7 350 aa12.88□□□□□ -0.35
IRF3-219ENST00000597636 KLHDC1Q8N7A1 406 aa12.88□□□□□ -0.35
IRF3-219ENST00000597636 SSMEM1Q8WWF3 244 aa12.88□□□□□ -0.35
IRF3-219ENST00000597636 HEYLQ9NQ87 328 aaPredicted RBP12.88□□□□□ -0.35
IRF3-219ENST00000597636 GVINP1Q7Z2Y8 2422 aa12.88□□□□□ -0.35
IRF3-219ENST00000597636 SPINK4O60575 86 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 MT-CO2P00403 227 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 OR10J4P0C629 311 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 AESQ08117 197 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 OR1C1Q15619 314 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 EFNB3Q15768 340 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 SPATA31B1PQ5VZV4 182 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 GP6Q9HCN6 339 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 COX19Q49B96 90 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 NIT1Q86X76 327 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 C1orf159Q96HA4 380 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 LSM4Q9Y4Z0 139 aaKnown RBP12.87□□□□□ -0.35
IRF3-219ENST00000597636 CACNA1DQ01668 2161 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 FAM186AA6NE01 2351 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 FAM166BA8MTA8 275 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 FOXH1O75593 365 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 VDAC2P45880 294 aaPredicted RBP12.87□□□□□ -0.35
IRF3-219ENST00000597636 CYB561P49447 251 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 RHOBP62745 196 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 MRGPRDQ8TDS7 321 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 GAL3ST2Q9H3Q3 398 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 TUBG2Q9NRH3 451 aa12.87□□□□□ -0.35
IRF3-219ENST00000597636 AREGP15514 252 aa12.86□□□□□ -0.35
IRF3-219ENST00000597636 WNT10AQ9GZT5 417 aa12.86□□□□□ -0.35
IRF3-219ENST00000597636 MAP1BP46821 2468 aaKnown RBP12.86□□□□□ -0.35
IRF3-219ENST00000597636 ZNF292O60281 2723 aa12.86□□□□□ -0.35
IRF3-219ENST00000597636 TRAV34A0A0B4J273 112 aa12.86□□□□□ -0.35
IRF3-219ENST00000597636 TOMM40O96008 361 aa12.86□□□□□ -0.35
IRF3-219ENST00000597636 GNG4P50150 75 aa12.86□□□□□ -0.35
IRF3-219ENST00000597636 UBE2V1Q13404 147 aa12.86□□□□□ -0.35
IRF3-219ENST00000597636 CENPWQ5EE01 88 aa12.86□□□□□ -0.35
IRF3-219ENST00000597636 ZNF766Q5HY98 468 aa12.86□□□□□ -0.35
IRF3-219ENST00000597636 C22orf15Q8WYQ4 148 aa12.86□□□□□ -0.35
IRF3-219ENST00000597636 NPVFQ9HCQ7 196 aa12.86□□□□□ -0.35
IRF3-219ENST00000597636 PSG11Q9UQ72 335 aa12.86□□□□□ -0.35
IRF3-219ENST00000597636 BMPR1BO00238 502 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 GFRA3O60609 400 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 GRPP07492 148 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 CELA3AP09093 270 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 COL8A2P25067 703 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 SRIP30626 198 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 FOXF2Q12947 444 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 PRAMEF5Q5TYX0 476 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 PRAMEF6Q5VXH4 476 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 ABHD12Q8N2K0 398 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 OR4A16Q8NH70 328 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 COQ2Q96H96 371 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 BOKQ9UMX3 212 aaPredicted RBP12.85□□□□□ -0.35
IRF3-219ENST00000597636 MRPS16Q9Y3D3 137 aaKnown RBP12.85□□□□□ -0.35
IRF3-219ENST00000597636 IGHV3-43A0A0B4J1X8 118 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 HELTA6NFD8 242 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 FAM90A9PA6NNJ1 464 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 CDX4O14627 284 aaPredicted RBP12.85□□□□□ -0.35
IRF3-219ENST00000597636 IGHV3-43DP0DP04 118 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 TSPOP30536 169 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 OTX2P32243 289 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 GABRA2P47869 451 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 SAPCD1Q5SSQ6 148 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 C19orf35Q6ZS72 473 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 PPP1R32Q7Z5V6 425 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 OR4P4Q8NGL7 312 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 OSTCQ9NRP0 149 aa12.85□□□□□ -0.35
IRF3-219ENST00000597636 ITGB1BP1O14713 200 aa12.84□□□□□ -0.35
IRF3-219ENST00000597636 CGAP01215 116 aa12.84□□□□□ -0.35
IRF3-219ENST00000597636 SLC35B1P78383 322 aa12.84□□□□□ -0.35
IRF3-219ENST00000597636 PEAR1Q5VY43 1037 aaPredicted RBP12.84□□□□□ -0.35
IRF3-219ENST00000597636 STPG3Q8N7X2 389 aa12.84□□□□□ -0.35
IRF3-219ENST00000597636 OR52E5Q8NH55 327 aa12.84□□□□□ -0.35
IRF3-219ENST00000597636 TSKUQ8WUA8 353 aa12.84□□□□□ -0.35
IRF3-219ENST00000597636 RNASE7Q9H1E1 156 aaKnown RBP12.84□□□□□ -0.35
IRF3-219ENST00000597636 HES4Q9HCC6 221 aa12.84□□□□□ -0.35
IRF3-219ENST00000597636 COX11Q9Y6N1 276 aa12.84□□□□□ -0.35
IRF3-219ENST00000597636 DEFB108AA8MXU0 73 aa12.84□□□□□ -0.35
IRF3-219ENST00000597636 K7EP13 123 aa12.84□□□□□ -0.35
IRF3-219ENST00000597636 FCGR3BO75015 233 aa12.84□□□□□ -0.35
IRF3-219ENST00000597636 CA2P00918 260 aa12.84□□□□□ -0.35
IRF3-219ENST00000597636 SSTR5P35346 364 aa12.84□□□□□ -0.35
IRF3-219ENST00000597636 HINT1P49773 126 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms