RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 RBFOX2O43251 390 aaKnown RBP eCLIP11.59□□□□□ -0.55
TGFB1-202ENST00000597453 CREBL2O60519 120 aaPredicted RBP11.59□□□□□ -0.55
TGFB1-202ENST00000597453 UPK1BO75841 260 aa11.59□□□□□ -0.55
TGFB1-202ENST00000597453 IGLV1-51P01701 117 aa11.59□□□□□ -0.55
TGFB1-202ENST00000597453 CD74P04233 296 aa11.59□□□□□ -0.55
TGFB1-202ENST00000597453 S100A5P33763 92 aa11.59□□□□□ -0.55
TGFB1-202ENST00000597453 TAS2R19P59542 299 aa11.59□□□□□ -0.55
TGFB1-202ENST00000597453 AADACL3Q5VUY0 350 aa11.59□□□□□ -0.55
TGFB1-202ENST00000597453 LPCAT3Q6P1A2 487 aa11.59□□□□□ -0.55
TGFB1-202ENST00000597453 CMTM1Q8IZ96 169 aa11.59□□□□□ -0.55
TGFB1-202ENST00000597453 Q8N1Y9 231 aa11.59□□□□□ -0.55
TGFB1-202ENST00000597453 SOSTQ9BQB4 213 aa11.59□□□□□ -0.55
TGFB1-202ENST00000597453 ELOVL1Q9BW60 279 aa11.59□□□□□ -0.55
TGFB1-202ENST00000597453 TINAGL1Q9GZM7 467 aaPredicted RBP11.59□□□□□ -0.55
TGFB1-202ENST00000597453 GPR31O00270 319 aa11.58□□□□□ -0.56
TGFB1-202ENST00000597453 GSTZ1O43708 216 aaPredicted RBP11.58□□□□□ -0.56
TGFB1-202ENST00000597453 RBMXL2O75526 392 aaKnown RBP11.58□□□□□ -0.56
TGFB1-202ENST00000597453 TRBV12-3P01733 135 aa11.58□□□□□ -0.56
TGFB1-202ENST00000597453 IFNA6P05013 189 aa11.58□□□□□ -0.56
TGFB1-202ENST00000597453 APELAP0DMC3 54 aa11.58□□□□□ -0.56
TGFB1-202ENST00000597453 ZP3P21754 424 aa11.58□□□□□ -0.56
TGFB1-202ENST00000597453 UCP3P55916 312 aa11.58□□□□□ -0.56
TGFB1-202ENST00000597453 IDO2Q6ZQW0 420 aa11.58□□□□□ -0.56
TGFB1-202ENST00000597453 LHFPL1Q86WI0 220 aa11.58□□□□□ -0.56
TGFB1-202ENST00000597453 SPAG16Q8N0X2 631 aa11.58□□□□□ -0.56
TGFB1-202ENST00000597453 OR51H1Q8NH63 302 aa11.58□□□□□ -0.56
TGFB1-202ENST00000597453 CD300LFQ8TDQ1 290 aa11.58□□□□□ -0.56
TGFB1-202ENST00000597453 A0A0G2JLM5 398 aa11.57□□□□□ -0.56
TGFB1-202ENST00000597453 FABP12A6NFH5 140 aa11.57□□□□□ -0.56
TGFB1-202ENST00000597453 PGLYRP1O75594 196 aaPredicted RBP11.57□□□□□ -0.56
TGFB1-202ENST00000597453 BRI3O95415 125 aa11.57□□□□□ -0.56
TGFB1-202ENST00000597453 RAB3DO95716 219 aa11.57□□□□□ -0.56
TGFB1-202ENST00000597453 PTTG1O95997 202 aa11.57□□□□□ -0.56
TGFB1-202ENST00000597453 HRASP01112 189 aa11.57□□□□□ -0.56
TGFB1-202ENST00000597453 RLN1P04808 185 aa11.57□□□□□ -0.56
TGFB1-202ENST00000597453 IGHV4-30-4P0DP06 118 aa11.57□□□□□ -0.56
TGFB1-202ENST00000597453 KLF5Q13887 457 aaPredicted RBP11.57□□□□□ -0.56
TGFB1-202ENST00000597453 PRSS8Q16651 343 aa11.57□□□□□ -0.56
TGFB1-202ENST00000597453 STEAP1BQ6NZ63 245 aa11.57□□□□□ -0.56
TGFB1-202ENST00000597453 IL34Q6ZMJ4 242 aa11.57□□□□□ -0.56
TGFB1-202ENST00000597453 SLC38A6Q8IZM9 456 aa11.57□□□□□ -0.56
TGFB1-202ENST00000597453 OR4D10Q8NGI6 311 aa11.57□□□□□ -0.56
TGFB1-202ENST00000597453 VSTM2AQ8TAG5 236 aa11.57□□□□□ -0.56
TGFB1-202ENST00000597453 MUC7Q8TAX7 377 aa11.57□□□□□ -0.56
TGFB1-202ENST00000597453 TMEM68Q96MH6 324 aa11.57□□□□□ -0.56
TGFB1-202ENST00000597453 CCDC32Q9BV29 185 aa11.57□□□□□ -0.56
TGFB1-202ENST00000597453 V9GYH0 126 aa11.57□□□□□ -0.56
TGFB1-202ENST00000597453 TENM2Q9NT68 2774 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 MSGN1A6NI15 193 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 KBTBD11O94819 623 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 OR2A4O95047 310 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 HPRT1P00492 218 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 S100GP29377 79 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 SYNJ2BPP57105 145 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 IFITM3Q01628 133 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 MEF2DQ14814 521 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 CASC10Q5T4H9 136 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 ZNF343Q6P1L6 599 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 CCDC190Q86UF4 302 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 MMD2Q8IY49 270 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 VKORC1L1Q8N0U8 176 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 PUSL1Q8N0Z8 303 aaKnown RBP11.56□□□□□ -0.56
TGFB1-202ENST00000597453 ADAD2Q8NCV1 583 aaKnown RBP11.56□□□□□ -0.56
TGFB1-202ENST00000597453 OR9G4Q8NGQ1 327 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 OR2A7Q96R45 310 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 AIFM2Q9BRQ8 373 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 ZNF430Q9H8G1 570 aaPredicted RBP11.56□□□□□ -0.56
TGFB1-202ENST00000597453 PLEKHA2Q9HB19 425 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 COA4Q9NYJ1 87 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 COMMD9Q9P000 198 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 PEF1Q9UBV8 284 aaKnown RBP11.56□□□□□ -0.56
TGFB1-202ENST00000597453 DNAH1Q9P2D7 4330 aa11.56□□□□□ -0.56
TGFB1-202ENST00000597453 AKAIN1P0CW23 69 aa11.55□□□□□ -0.56
TGFB1-202ENST00000597453 NQO2P16083 231 aa11.55□□□□□ -0.56
TGFB1-202ENST00000597453 F2RP25116 425 aa11.55□□□□□ -0.56
TGFB1-202ENST00000597453 TAS2R31P59538 309 aa11.55□□□□□ -0.56
TGFB1-202ENST00000597453 TNXAQ16473 311 aa11.55□□□□□ -0.56
TGFB1-202ENST00000597453 POU2AF1Q16633 256 aa11.55□□□□□ -0.56
TGFB1-202ENST00000597453 PHLDA2Q53GA4 152 aa11.55□□□□□ -0.56
TGFB1-202ENST00000597453 TMEM167AQ8TBQ9 72 aa11.55□□□□□ -0.56
TGFB1-202ENST00000597453 CHAC2Q8WUX2 184 aa11.55□□□□□ -0.56
TGFB1-202ENST00000597453 SRSF12Q8WXF0 261 aaKnown RBP11.55□□□□□ -0.56
TGFB1-202ENST00000597453 ZNF486Q96H40 463 aaPredicted RBP11.55□□□□□ -0.56
TGFB1-202ENST00000597453 PHB2Q99623 299 aa11.55□□□□□ -0.56
TGFB1-202ENST00000597453 NEURL2Q9BR09 285 aa11.55□□□□□ -0.56
TGFB1-202ENST00000597453 TM2D3Q9BRN9 247 aa11.55□□□□□ -0.56
TGFB1-202ENST00000597453 ZMAT4Q9H898 229 aa11.55□□□□□ -0.56
TGFB1-202ENST00000597453 C19orf73Q9NVV2 129 aa11.55□□□□□ -0.56
TGFB1-202ENST00000597453 ANKRD20A5PA0PJZ0 165 aa11.54□□□□□ -0.56
TGFB1-202ENST00000597453 ACTL6BO94805 426 aa11.54□□□□□ -0.56
TGFB1-202ENST00000597453 S1PR2O95136 353 aa11.54□□□□□ -0.56
TGFB1-202ENST00000597453 PRH1P02810 166 aa11.54□□□□□ -0.56
TGFB1-202ENST00000597453 PGAM2P15259 253 aa11.54□□□□□ -0.56
TGFB1-202ENST00000597453 PTBP1P26599 531 aaKnown RBP eCLIP11.54□□□□□ -0.56
TGFB1-202ENST00000597453 DEFA1P59665 94 aa11.54□□□□□ -0.56
TGFB1-202ENST00000597453 DEFA3P59666 94 aa11.54□□□□□ -0.56
TGFB1-202ENST00000597453 SPANXN2Q5MJ10 180 aa11.54□□□□□ -0.56
TGFB1-202ENST00000597453 OR4A5Q8NH83 315 aa11.54□□□□□ -0.56
TGFB1-202ENST00000597453 TERB2Q8NHR7 220 aa11.54□□□□□ -0.56
TGFB1-202ENST00000597453 SLC2A9Q9NRM0 540 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms