RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 DUX5Q96PT3 197 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 PRDM13Q9H4Q3 707 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 BET1LQ9NYM9 111 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 CACNG5Q9UF02 275 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 VPREB3Q9UKI3 123 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 POMT1Q9Y6A1 747 aa9.59□□□□□ -0.87
SHKBP1-213ENST00000597325 A0A0G2JRQ6 117 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 A0A1B0GU03 582 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 A6NDX4 124 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 DNAJC9-AS1A6NH13 148 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 HMX3A6NHT5 357 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 HOXA3O43365 443 aaPredicted RBP9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 ACTL6BO94805 426 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 NDUFA3O95167 84 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 PRB2P02812 416 aaPredicted RBP9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 P0C879 139 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 TRAPPC2P0DI81 140 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 TRAPPC2BP0DI82 140 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 SLC25A6P12236 298 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 HLA-GP17693 338 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 BCAP31P51572 246 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 F2RL1P55085 397 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 OR2B8PP59922 312 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 IAH1Q2TAA2 248 aaPredicted RBP9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 PUSL1Q8N0Z8 303 aaKnown RBP9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 TMEM86BQ8N661 226 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 OR11H7Q8NGC8 314 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 PIFOQ8TCI5 191 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 RBM14Q96PK6 669 aaKnown RBP9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 RASL11BQ9BPW5 248 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 FBXL15Q9H469 300 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 RANBP3Q9H6Z4 567 aaPredicted RBP9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 TNFRSF19Q9NS68 423 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 GSKIPQ9P0R6 139 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 CACFD1Q9UGQ2 172 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 PRNDQ9UKY0 176 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 SIGLEC9Q9Y336 463 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 TENM2Q9NT68 2774 aa9.58□□□□□ -0.88
SHKBP1-213ENST00000597325 M0QZK8 103 aa9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 UPK2O00526 184 aa9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 SIX6O95475 246 aa9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 RNASE1P07998 156 aaKnown RBP9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 OR9G9P0C7N8 305 aa9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 RPL8P62917 257 aaKnown RBP9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 CYCSP99999 105 aaKnown RBP9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 IZUMO4Q1ZYL8 232 aa9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 C5orf64Q2M2E5 130 aa9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 C2orf68Q2NKX9 166 aa9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 PPP1R27Q86WC6 154 aa9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 FOXRED2Q8IWF2 684 aa9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 MMD2Q8IY49 270 aa9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 ZBTB8BQ8NAP8 495 aaPredicted RBP9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 TMEM167AQ8TBQ9 72 aa9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 ASB13Q8WXK3 278 aa9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 C2orf50Q96LR7 162 aa9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 CLCC1Q96S66 551 aa9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 CHIAQ9BZP6 476 aa9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 TPSG1Q9NRR2 321 aa9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 COA4Q9NYJ1 87 aa9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 FKBP11Q9NYL4 201 aa9.57□□□□□ -0.88
SHKBP1-213ENST00000597325 RYR1P21817 5038 aa9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 C15orf61A6NNL5 157 aa9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 MPTX1A8MV57 137 aa9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 FGF16O43320 207 aa9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 SCGB1D2O95969 90 aa9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 FGF2P09038 288 aa9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 GIPP09681 153 aaPredicted RBP9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 CXCL3P19876 107 aa9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 MAS1LP35410 378 aa9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 H2BFSP57053 126 aa9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 GNB1P62873 340 aa9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 RELBQ01201 579 aa9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 PRSS8Q16651 343 aa9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 REC114Q7Z4M0 266 aa9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 C5orf56Q8N8D9 126 aa9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 Q8N9W7 124 aa9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 OR10C1Q96KK4 312 aa9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 ZNF436Q9C0F3 470 aaPredicted RBP9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 COMMD5Q9GZQ3 224 aa9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 ZNF430Q9H8G1 570 aaPredicted RBP9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 PLSCR3Q9NRY6 295 aa9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 FOXA2Q9Y261 457 aaPredicted RBP9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 NSG2Q9Y328 171 aa9.56□□□□□ -0.88
SHKBP1-213ENST00000597325 G3V4G9 280 aa9.55□□□□□ -0.88
SHKBP1-213ENST00000597325 WRBO00258 174 aa9.55□□□□□ -0.88
SHKBP1-213ENST00000597325 NXPH3O95157 252 aa9.55□□□□□ -0.88
SHKBP1-213ENST00000597325 CNIH1O95406 144 aa9.55□□□□□ -0.88
SHKBP1-213ENST00000597325 CA2P00918 260 aa9.55□□□□□ -0.88
SHKBP1-213ENST00000597325 IFNA17P01571 189 aa9.55□□□□□ -0.88
SHKBP1-213ENST00000597325 CRYGBP07316 175 aa9.55□□□□□ -0.88
SHKBP1-213ENST00000597325 NKX2-1P43699 371 aaPredicted RBP9.55□□□□□ -0.88
SHKBP1-213ENST00000597325 CD83Q01151 205 aa9.55□□□□□ -0.88
SHKBP1-213ENST00000597325 TNXAQ16473 311 aa9.55□□□□□ -0.88
SHKBP1-213ENST00000597325 AKAP14Q86UN6 197 aa9.55□□□□□ -0.88
SHKBP1-213ENST00000597325 FAM71E2Q8N5Q1 922 aa9.55□□□□□ -0.88
SHKBP1-213ENST00000597325 ABHD5Q8WTS1 349 aa9.55□□□□□ -0.88
SHKBP1-213ENST00000597325 CHAC2Q8WUX2 184 aa9.55□□□□□ -0.88
SHKBP1-213ENST00000597325 QTRT1Q9BXR0 403 aaKnown RBP9.55□□□□□ -0.88
SHKBP1-213ENST00000597325 NMES1Q9C002 83 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms