RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 CNIH1O95406 144 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 BRI3O95415 125 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 LY86O95711 162 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 FRMD6-AS1P0C7T7 363 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 TRAPPC2P0DI81 140 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 TRAPPC2BP0DI82 140 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 MECP2P51608 486 aaKnown RBP7.98□□□□□ -1.13
LIG1-213ENST00000596672 GNG2P59768 71 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 TEX45Q8NA69 505 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 ENKURQ8TC29 256 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 SRSF12Q8WXF0 261 aaKnown RBP7.98□□□□□ -1.13
LIG1-213ENST00000596672 SNAPC3Q92966 411 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 GINS4Q9BRT9 223 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 SLA2Q9H6Q3 261 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 HRASLSQ9HDD0 168 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 ZNF355PQ9NSJ1 428 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 ANXA10Q9UJ72 324 aa7.98□□□□□ -1.13
LIG1-213ENST00000596672 TRAV3A0A0B4J244 114 aa7.97□□□□□ -1.13
LIG1-213ENST00000596672 FAM240BA0A1B0GVZ2 78 aa7.97□□□□□ -1.13
LIG1-213ENST00000596672 CENPXA8MT69 81 aa7.97□□□□□ -1.13
LIG1-213ENST00000596672 H3BUA1 57 aa7.97□□□□□ -1.13
LIG1-213ENST00000596672 BMPR1BO00238 502 aa7.97□□□□□ -1.13
LIG1-213ENST00000596672 CSN3P07498 182 aa7.97□□□□□ -1.13
LIG1-213ENST00000596672 NHLRC4P0CG21 123 aaPredicted RBP7.97□□□□□ -1.13
LIG1-213ENST00000596672 AADACP22760 399 aa7.97□□□□□ -1.13
LIG1-213ENST00000596672 SYNJ2BPP57105 145 aa7.97□□□□□ -1.13
LIG1-213ENST00000596672 AP3S2P59780 193 aa7.97□□□□□ -1.13
LIG1-213ENST00000596672 MRPS15P82914 257 aaKnown RBP7.97□□□□□ -1.13
LIG1-213ENST00000596672 TNXAQ16473 311 aa7.97□□□□□ -1.13
LIG1-213ENST00000596672 PUSL1Q8N0Z8 303 aaKnown RBP7.97□□□□□ -1.13
LIG1-213ENST00000596672 ZNF645Q8N7E2 425 aa7.97□□□□□ -1.13
LIG1-213ENST00000596672 IFT46Q9NQC8 304 aa7.97□□□□□ -1.13
LIG1-213ENST00000596672 CCL28Q9NRJ3 127 aa7.97□□□□□ -1.13
LIG1-213ENST00000596672 GAR1Q9NY12 217 aaKnown RBP7.97□□□□□ -1.13
LIG1-213ENST00000596672 SMAD5-AS1Q9Y6J3 95 aa7.97□□□□□ -1.13
LIG1-213ENST00000596672 BIRC6Q9NR09 4857 aa7.96□□□□□ -1.13
LIG1-213ENST00000596672 M0QYG6 137 aa7.96□□□□□ -1.14
LIG1-213ENST00000596672 CD3DP04234 171 aa7.96□□□□□ -1.14
LIG1-213ENST00000596672 OR9G9P0C7N8 305 aa7.96□□□□□ -1.14
LIG1-213ENST00000596672 HLA-DMAP28067 261 aa7.96□□□□□ -1.14
LIG1-213ENST00000596672 CCR6P51684 374 aa7.96□□□□□ -1.14
LIG1-213ENST00000596672 RTL8BQ17RB0 113 aa7.96□□□□□ -1.14
LIG1-213ENST00000596672 FAAP20Q6NZ36 180 aa7.96□□□□□ -1.14
LIG1-213ENST00000596672 HOGA1Q86XE5 327 aa7.96□□□□□ -1.14
LIG1-213ENST00000596672 TMEM229BQ8NBD8 167 aa7.96□□□□□ -1.14
LIG1-213ENST00000596672 OSR1Q8TAX0 266 aaPredicted RBP7.96□□□□□ -1.14
LIG1-213ENST00000596672 FANCD2OSQ96PS1 177 aa7.96□□□□□ -1.14
LIG1-213ENST00000596672 C7orf50Q9BRJ6 194 aaKnown RBP7.96□□□□□ -1.14
LIG1-213ENST00000596672 RANGRFQ9HD47 186 aaPredicted RBP7.96□□□□□ -1.14
LIG1-213ENST00000596672 C19orf73Q9NVV2 129 aa7.96□□□□□ -1.14
LIG1-213ENST00000596672 MCUBQ9NWR8 336 aa7.96□□□□□ -1.14
LIG1-213ENST00000596672 COA4Q9NYJ1 87 aa7.96□□□□□ -1.14
LIG1-213ENST00000596672 TAS2R8Q9NYW2 309 aa7.96□□□□□ -1.14
LIG1-213ENST00000596672 ZMAT5Q9UDW3 170 aaKnown RBP7.96□□□□□ -1.14
LIG1-213ENST00000596672 RBM7Q9Y580 266 aaKnown RBP7.96□□□□□ -1.14
LIG1-213ENST00000596672 SELENOKQ9Y6D0 94 aa7.96□□□□□ -1.14
LIG1-213ENST00000596672 C13orf42A0A1B0GVH6 325 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 NAP1L6A6NFF2 107 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 TNFSF12O43508 249 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 CCNKO75909 580 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 HLA-AP01891 365 aaKnown RBP7.95□□□□□ -1.14
LIG1-213ENST00000596672 AKAIN1P0CW23 69 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 RRASP10301 218 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 AREGP15514 252 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 BTCP35070 178 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 RCVRNP35243 200 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 RHOGP84095 191 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 SSBP1Q04837 148 aaKnown RBP7.95□□□□□ -1.14
LIG1-213ENST00000596672 ARL6IP1Q15041 203 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 CDK10Q15131 360 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 STEAP1BQ6NZ63 245 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 KCTD9Q7L273 389 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 TTC9CQ8N5M4 171 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 DUSP18Q8NEJ0 188 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 BEST4Q8NFU0 473 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 OR4D10Q8NGI6 311 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 OR4C16Q8NGL9 310 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 OR9G4Q8NGQ1 327 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 ADTRPQ96IZ2 230 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 PEF1Q9UBV8 284 aaKnown RBP7.95□□□□□ -1.14
LIG1-213ENST00000596672 S4R3C0 116 aa7.95□□□□□ -1.14
LIG1-213ENST00000596672 PPP5D1E7EU14 171 aa7.94□□□□□ -1.14
LIG1-213ENST00000596672 OR2J3O76001 311 aa7.94□□□□□ -1.14
LIG1-213ENST00000596672 NDUFB8O95169 186 aa7.94□□□□□ -1.14
LIG1-213ENST00000596672 RAB3DO95716 219 aa7.94□□□□□ -1.14
LIG1-213ENST00000596672 IGHV3-23P01764 117 aa7.94□□□□□ -1.14
LIG1-213ENST00000596672 PMP2P02689 132 aa7.94□□□□□ -1.14
LIG1-213ENST00000596672 IGHV4-30-4P0DP06 118 aa7.94□□□□□ -1.14
LIG1-213ENST00000596672 FCGR2CP31995 323 aa7.94□□□□□ -1.14
LIG1-213ENST00000596672 FAUP35544 74 aaKnown RBP7.94□□□□□ -1.14
LIG1-213ENST00000596672 CBX5P45973 191 aa7.94□□□□□ -1.14
LIG1-213ENST00000596672 TAS2R19P59542 299 aa7.94□□□□□ -1.14
LIG1-213ENST00000596672 KLK9Q2XQG4 91 aa7.94□□□□□ -1.14
LIG1-213ENST00000596672 VMA21Q3ZAQ7 101 aa7.94□□□□□ -1.14
LIG1-213ENST00000596672 PLET1Q6UQ28 207 aa7.94□□□□□ -1.14
LIG1-213ENST00000596672 TMEM167AQ8TBQ9 72 aa7.94□□□□□ -1.14
LIG1-213ENST00000596672 ZNF414Q96IQ9 312 aa7.94□□□□□ -1.14
LIG1-213ENST00000596672 TMEM68Q96MH6 324 aa7.94□□□□□ -1.14
LIG1-213ENST00000596672 RCHY1Q96PM5 261 aa7.94□□□□□ -1.14
LIG1-213ENST00000596672 OR4C12Q96R67 309 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms