RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 VSTM2AQ8TAG5 236 aa12.31□□□□□ -0.44
USHBP1-206ENST00000596436 MARCH1Q8TCQ1 289 aa12.31□□□□□ -0.44
USHBP1-206ENST00000596436 CD300LFQ8TDQ1 290 aa12.31□□□□□ -0.44
USHBP1-206ENST00000596436 SRRQ9GZT4 340 aa12.31□□□□□ -0.44
USHBP1-206ENST00000596436 BET1LQ9NYM9 111 aa12.31□□□□□ -0.44
USHBP1-206ENST00000596436 COMMD9Q9P000 198 aa12.31□□□□□ -0.44
USHBP1-206ENST00000596436 ZNF256Q9Y2P7 627 aaPredicted RBP12.31□□□□□ -0.44
USHBP1-206ENST00000596436 A0A1B0GW64 132 aa12.3□□□□□ -0.44
USHBP1-206ENST00000596436 A6NHS1 94 aa12.3□□□□□ -0.44
USHBP1-206ENST00000596436 MSGN1A6NI15 193 aa12.3□□□□□ -0.44
USHBP1-206ENST00000596436 DISC1C4P0D8 188 aa12.3□□□□□ -0.44
USHBP1-206ENST00000596436 E7EUB6 86 aa12.3□□□□□ -0.44
USHBP1-206ENST00000596436 IL6RP08887 468 aaPredicted RBP12.3□□□□□ -0.44
USHBP1-206ENST00000596436 NQO2P16083 231 aa12.3□□□□□ -0.44
USHBP1-206ENST00000596436 PTBP1P26599 531 aaKnown RBP eCLIP12.3□□□□□ -0.44
USHBP1-206ENST00000596436 RAB9AP51151 201 aa12.3□□□□□ -0.44
USHBP1-206ENST00000596436 PIGPP57054 158 aa12.3□□□□□ -0.44
USHBP1-206ENST00000596436 RND3P61587 244 aa12.3□□□□□ -0.44
USHBP1-206ENST00000596436 KLF9Q13886 244 aaPredicted RBP12.3□□□□□ -0.44
USHBP1-206ENST00000596436 CASC10Q5T4H9 136 aa12.3□□□□□ -0.44
USHBP1-206ENST00000596436 TMEM65Q6PI78 240 aa12.3□□□□□ -0.44
USHBP1-206ENST00000596436 ZNF491Q8N8L2 437 aa12.3□□□□□ -0.44
USHBP1-206ENST00000596436 OR5T1Q8NG75 326 aa12.3□□□□□ -0.44
USHBP1-206ENST00000596436 OR51S1Q8NGJ8 323 aa12.3□□□□□ -0.44
USHBP1-206ENST00000596436 ZNF486Q96H40 463 aaPredicted RBP12.3□□□□□ -0.44
USHBP1-206ENST00000596436 ASCL2Q99929 193 aa12.3□□□□□ -0.44
USHBP1-206ENST00000596436 GNB4Q9HAV0 340 aa12.3□□□□□ -0.44
USHBP1-206ENST00000596436 TMEM140Q9NV12 185 aa12.3□□□□□ -0.44
USHBP1-206ENST00000596436 BIRC6Q9NR09 4857 aa12.29□□□□□ -0.44
USHBP1-206ENST00000596436 STARD9Q9P2P6 4700 aa12.29□□□□□ -0.44
USHBP1-206ENST00000596436 CGB1A6NKQ9 187 aa12.29□□□□□ -0.44
USHBP1-206ENST00000596436 CREBL2O60519 120 aaPredicted RBP12.29□□□□□ -0.44
USHBP1-206ENST00000596436 IGKV1-39P01597 117 aa12.29□□□□□ -0.44
USHBP1-206ENST00000596436 IGKV1D-39P04432 117 aa12.29□□□□□ -0.44
USHBP1-206ENST00000596436 INSL3P51460 131 aa12.29□□□□□ -0.44
USHBP1-206ENST00000596436 RUNX1Q01196 453 aa12.29□□□□□ -0.44
USHBP1-206ENST00000596436 SPANXN2Q5MJ10 180 aa12.29□□□□□ -0.44
USHBP1-206ENST00000596436 MUC7Q8TAX7 377 aa12.29□□□□□ -0.44
USHBP1-206ENST00000596436 MS4A10Q96PG2 267 aa12.29□□□□□ -0.44
USHBP1-206ENST00000596436 PHB2Q99623 299 aa12.29□□□□□ -0.44
USHBP1-206ENST00000596436 SLC2A8Q9NY64 477 aa12.29□□□□□ -0.44
USHBP1-206ENST00000596436 MARCH11A6NNE9 402 aa12.28□□□□□ -0.44
USHBP1-206ENST00000596436 TEX22C9J3V5 150 aa12.28□□□□□ -0.44
USHBP1-206ENST00000596436 I3L521 148 aa12.28□□□□□ -0.44
USHBP1-206ENST00000596436 UPK2O00526 184 aa12.28□□□□□ -0.44
USHBP1-206ENST00000596436 MPPED1O15442 326 aa12.28□□□□□ -0.44
USHBP1-206ENST00000596436 ACTL6BO94805 426 aa12.28□□□□□ -0.44
USHBP1-206ENST00000596436 CTSDP07339 412 aaPredicted RBP12.28□□□□□ -0.44
USHBP1-206ENST00000596436 S100GP29377 79 aa12.28□□□□□ -0.44
USHBP1-206ENST00000596436 G6PCP35575 357 aa12.28□□□□□ -0.44
USHBP1-206ENST00000596436 DEFA5Q01523 94 aa12.28□□□□□ -0.44
USHBP1-206ENST00000596436 DMBX1Q8NFW5 382 aa12.28□□□□□ -0.44
USHBP1-206ENST00000596436 OR4A5Q8NH83 315 aa12.28□□□□□ -0.44
USHBP1-206ENST00000596436 UBE2E2Q96LR5 201 aa12.28□□□□□ -0.44
USHBP1-206ENST00000596436 OR5B12Q96R08 314 aa12.28□□□□□ -0.44
USHBP1-206ENST00000596436 TP53RKQ96S44 253 aa12.28□□□□□ -0.44
USHBP1-206ENST00000596436 SDHCQ99643 169 aaPredicted RBP12.28□□□□□ -0.44
USHBP1-206ENST00000596436 RTBDNQ9BSG5 229 aaPredicted RBP12.28□□□□□ -0.44
USHBP1-206ENST00000596436 HRASLSQ9HDD0 168 aa12.28□□□□□ -0.44
USHBP1-206ENST00000596436 FAM212BQ9NTI7 297 aaPredicted RBP12.28□□□□□ -0.44
USHBP1-206ENST00000596436 SMAD5-AS1Q9Y6J3 95 aa12.28□□□□□ -0.44
USHBP1-206ENST00000596436 HMX3A6NHT5 357 aa12.27□□□□□ -0.45
USHBP1-206ENST00000596436 KRASP01116 189 aa12.27□□□□□ -0.45
USHBP1-206ENST00000596436 HLA-GP17693 338 aa12.27□□□□□ -0.45
USHBP1-206ENST00000596436 MAS1LP35410 378 aa12.27□□□□□ -0.45
USHBP1-206ENST00000596436 RPL27AP46776 148 aaKnown RBP12.27□□□□□ -0.45
USHBP1-206ENST00000596436 RPL8P62917 257 aaKnown RBP12.27□□□□□ -0.45
USHBP1-206ENST00000596436 C19orf35Q6ZS72 473 aa12.27□□□□□ -0.45
USHBP1-206ENST00000596436 ADAD2Q8NCV1 583 aaKnown RBP12.27□□□□□ -0.45
USHBP1-206ENST00000596436 OR11H1Q8NG94 326 aa12.27□□□□□ -0.45
USHBP1-206ENST00000596436 ZFAND1Q8TCF1 268 aa12.27□□□□□ -0.45
USHBP1-206ENST00000596436 PRRT1Q99946 306 aa12.27□□□□□ -0.45
USHBP1-206ENST00000596436 AIFM2Q9BRQ8 373 aa12.27□□□□□ -0.45
USHBP1-206ENST00000596436 ALX4Q9H161 411 aaPredicted RBP12.27□□□□□ -0.45
USHBP1-206ENST00000596436 C5orf66Q9H5L9 145 aa12.27□□□□□ -0.45
USHBP1-206ENST00000596436 MCUBQ9NWR8 336 aa12.27□□□□□ -0.45
USHBP1-206ENST00000596436 VSIG4Q9Y279 399 aa12.27□□□□□ -0.45
USHBP1-206ENST00000596436 H0Y980 276 aa12.26□□□□□ -0.45
USHBP1-206ENST00000596436 H3BUA1 57 aa12.26□□□□□ -0.45
USHBP1-206ENST00000596436 RBMXL2O75526 392 aaKnown RBP12.26□□□□□ -0.45
USHBP1-206ENST00000596436 TRGV3P03979 118 aa12.26□□□□□ -0.45
USHBP1-206ENST00000596436 OR8U8P0C7N1 319 aa12.26□□□□□ -0.45
USHBP1-206ENST00000596436 OR9G9P0C7N8 305 aa12.26□□□□□ -0.45
USHBP1-206ENST00000596436 TPPP2P59282 170 aa12.26□□□□□ -0.45
USHBP1-206ENST00000596436 ERVK-16P61578 105 aa12.26□□□□□ -0.45
USHBP1-206ENST00000596436 SURF2Q15527 256 aaPredicted RBP12.26□□□□□ -0.45
USHBP1-206ENST00000596436 BAK1Q16611 211 aa12.26□□□□□ -0.45
USHBP1-206ENST00000596436 CNPY1Q3B7I2 92 aa12.26□□□□□ -0.45
USHBP1-206ENST00000596436 SBSPONQ8IVN8 264 aa12.26□□□□□ -0.45
USHBP1-206ENST00000596436 TOMM5Q8N4H5 51 aa12.26□□□□□ -0.45
USHBP1-206ENST00000596436 SEC22AQ96IW7 307 aa12.26□□□□□ -0.45
USHBP1-206ENST00000596436 TMEM68Q96MH6 324 aa12.26□□□□□ -0.45
USHBP1-206ENST00000596436 FYTTD1Q96QD9 318 aaKnown RBP12.26□□□□□ -0.45
USHBP1-206ENST00000596436 SPIN2AQ99865 258 aa12.26□□□□□ -0.45
USHBP1-206ENST00000596436 SPIN2BQ9BPZ2 258 aa12.26□□□□□ -0.45
USHBP1-206ENST00000596436 ZNF355PQ9NSJ1 428 aa12.26□□□□□ -0.45
USHBP1-206ENST00000596436 GPR132Q9UNW8 380 aa12.26□□□□□ -0.45
USHBP1-206ENST00000596436 C3orf85A0A1B0GTC6 90 aa12.25□□□□□ -0.45
USHBP1-206ENST00000596436 IGHV3-11P01762 117 aa12.25□□□□□ -0.45
USHBP1-206ENST00000596436 PRH1P02810 166 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms