RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 RPL8P62917 257 aaKnown RBP8.25□□□□□ -1.09
LIG1-210ENST00000596332 NMSQ5H8A3 153 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 DMRTA1Q5VZB9 504 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 C19orf35Q6ZS72 473 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 C18orf65Q6ZTR6 163 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 LYZL2Q7Z4W2 148 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 TMED4Q7Z7H5 227 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 SGPP2Q8IWX5 399 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 MMD2Q8IY49 270 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 CENPSQ8N2Z9 138 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 C11orf44Q8N8P7 122 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 POC5Q8NA72 575 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 CHPT1Q8WUD6 406 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 SRSF12Q8WXF0 261 aaKnown RBP8.25□□□□□ -1.09
LIG1-210ENST00000596332 ARPC1AQ92747 370 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 GPR146Q96CH1 333 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 CITED2Q99967 270 aaPredicted RBP8.25□□□□□ -1.09
LIG1-210ENST00000596332 C20orf85Q9H1P6 137 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 PARP11Q9NR21 331 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 NDUFA4L2Q9NRX3 87 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 DMRT1Q9Y5R6 373 aa8.25□□□□□ -1.09
LIG1-210ENST00000596332 PKD1L1Q8TDX9 2849 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 IGLC7A0M8Q6 106 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 HMX3A6NHT5 357 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 CENPXA8MT69 81 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 SERPINE2P07093 398 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 OR4E1P0C645 316 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 HLA-GP17693 338 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 S100GP29377 79 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 MAS1LP35410 378 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 UBE2MP61081 183 aaKnown RBP8.24□□□□□ -1.09
LIG1-210ENST00000596332 GNB1P62873 340 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 DHRS2Q13268 280 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 PLGLAQ15195 96 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 TNXAQ16473 311 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 C12orf54Q6X4T0 127 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 Q6ZNX1 250 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 CENPVQ7Z7K6 275 aaPredicted RBP8.24□□□□□ -1.09
LIG1-210ENST00000596332 FOXRED2Q8IWF2 684 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 SLC35G3Q8N808 338 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 OR10W1Q8NGF6 305 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 OR52B4Q8NGK2 314 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 VSTM2AQ8TAG5 236 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 CASTOR1Q8WTX7 329 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 RBPMSQ93062 196 aaKnown RBP8.24□□□□□ -1.09
LIG1-210ENST00000596332 IL22RA2Q969J5 263 aa8.24□□□□□ -1.09
LIG1-210ENST00000596332 TRAV6A0A075B6T7 132 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 PSMB11A5LHX3 300 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 C15orf61A6NNL5 157 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 PITX3O75364 302 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 BRI3O95415 125 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 OPN1MWP04001 364 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 RPLP1P05386 114 aaKnown RBP8.23□□□□□ -1.09
LIG1-210ENST00000596332 CRYGCP07315 174 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 APELAP0DMC3 54 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 OPN1MW2P0DN77 364 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 OPN1MW3P0DN78 364 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 AREGP15514 252 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 WT1-ASQ06250 92 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 TMEM268Q5VZI3 342 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 LYG2Q86SG7 212 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 ZNF429Q86V71 674 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 TTC9CQ8N5M4 171 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 DMBX1Q8NFW5 382 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 GRPEL2Q8TAA5 225 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 LSM10Q969L4 123 aaKnown RBP8.23□□□□□ -1.09
LIG1-210ENST00000596332 AIFM2Q9BRQ8 373 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 MARVELD1Q9BSK0 173 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 QTRT1Q9BXR0 403 aaKnown RBP8.23□□□□□ -1.09
LIG1-210ENST00000596332 NUDT15Q9NV35 164 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 FOXA2Q9Y261 457 aaPredicted RBP8.23□□□□□ -1.09
LIG1-210ENST00000596332 KCNIP3Q9Y2W7 256 aa8.23□□□□□ -1.09
LIG1-210ENST00000596332 TET2Q6N021 2002 aaPredicted RBP8.23□□□□□ -1.09
LIG1-210ENST00000596332 TRBV9A0A0B4J1U6 114 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 A0A0B4J2A0 478 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 FAM240BA0A1B0GVZ2 78 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 MPTX1A8MV57 137 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 DUS4LO95620 317 aaKnown RBP8.22□□□□□ -1.09
LIG1-210ENST00000596332 H2AFB2P0C5Z0 115 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 CTRB1P17538 263 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 RPL27AP46776 148 aaKnown RBP8.22□□□□□ -1.09
LIG1-210ENST00000596332 MFAP2P55001 183 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 FOXE3Q13461 319 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 ECSCRQ19T08 205 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 TRIM16LQ309B1 348 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 PDLIM3Q53GG5 364 aaPredicted RBP8.22□□□□□ -1.09
LIG1-210ENST00000596332 CTRB2Q6GPI1 263 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 C11orf87Q6NUJ2 197 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 UNQ5815/PRO19632Q6UWF5 114 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 SHISA2Q6UWI4 295 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 C3orf56Q8N813 242 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 ZNF491Q8N8L2 437 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 OR5T1Q8NG75 326 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 MITD1Q8WV92 249 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 FANCD2OSQ96PS1 177 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 SEC22CQ9BRL7 303 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 SHPKQ9UHJ6 478 aa8.22□□□□□ -1.09
LIG1-210ENST00000596332 A0A1W2PN81 502 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 ST8SIA3O43173 380 aa8.21□□□□□ -1.1
LIG1-210ENST00000596332 ADAP1O75689 374 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms