RNA–Protein interactions for RNA: ENST00000595437.5

FARP1-214, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene FARP1, Length 4,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-214ENST00000595437 MBD3L3A6NE82 208 aaPredicted RBP12.68□□□□□ -0.38
FARP1-214ENST00000595437 MBD3L5A6NJ08 208 aaPredicted RBP12.68□□□□□ -0.38
FARP1-214ENST00000595437 DUTP33316 252 aaKnown RBP12.68□□□□□ -0.38
FARP1-214ENST00000595437 Q6P435 159 aa12.68□□□□□ -0.38
FARP1-214ENST00000595437 MBD3L2Q8NHZ7 208 aaPredicted RBP12.68□□□□□ -0.38
FARP1-214ENST00000595437 IFI27L2Q9H2X8 130 aa12.68□□□□□ -0.38
FARP1-214ENST00000595437 A8MWL6 223 aa12.68□□□□□ -0.38
FARP1-214ENST00000595437 IBA57Q5T440 356 aaKnown RBP12.68□□□□□ -0.38
FARP1-214ENST00000595437 WDFY1Q8IWB7 410 aa12.68□□□□□ -0.38
FARP1-214ENST00000595437 OR51G1Q8NGK1 321 aa12.68□□□□□ -0.38
FARP1-214ENST00000595437 FAM222BQ8WU58 562 aa12.68□□□□□ -0.38
FARP1-214ENST00000595437 SLC25A15Q9Y619 301 aa12.68□□□□□ -0.38
FARP1-214ENST00000595437 ARL2-SNX15V9GYD0 113 aa12.68□□□□□ -0.38
FARP1-214ENST00000595437 TRAV30A0A087WSZ9 112 aa12.68□□□□□ -0.38
FARP1-214ENST00000595437 FAM106CPP0CH98 169 aa12.68□□□□□ -0.38
FARP1-214ENST00000595437 PAFAH1B2P68402 229 aa12.68□□□□□ -0.38
FARP1-214ENST00000595437 LINC00518Q8N0U6 118 aa12.68□□□□□ -0.38
FARP1-214ENST00000595437 A0A1B0GW64 132 aa12.67□□□□□ -0.38
FARP1-214ENST00000595437 APELAP0DMC3 54 aa12.67□□□□□ -0.38
FARP1-214ENST00000595437 CDX1P47902 265 aaPredicted RBP12.67□□□□□ -0.38
FARP1-214ENST00000595437 TFF3Q07654 80 aa12.67□□□□□ -0.38
FARP1-214ENST00000595437 APCSP02743 223 aa12.67□□□□□ -0.38
FARP1-214ENST00000595437 OR52E5Q8NH55 327 aa12.67□□□□□ -0.38
FARP1-214ENST00000595437 MBD3L1Q8WWY6 194 aa12.67□□□□□ -0.38
FARP1-214ENST00000595437 SRD5A3Q9H8P0 318 aa12.67□□□□□ -0.38
FARP1-214ENST00000595437 S100A4P26447 101 aaKnown RBP12.67□□□□□ -0.38
FARP1-214ENST00000595437 BPIFA4PQ86YQ2 179 aa12.67□□□□□ -0.38
FARP1-214ENST00000595437 PRSS3P2Q8NHM4 247 aa12.67□□□□□ -0.38
FARP1-214ENST00000595437 C15orf61A6NNL5 157 aa12.67□□□□□ -0.38
FARP1-214ENST00000595437 PLA2G2CQ5R387 149 aa12.67□□□□□ -0.38
FARP1-214ENST00000595437 OR51M1Q9H341 326 aa12.67□□□□□ -0.38
FARP1-214ENST00000595437 HILPDAQ9Y5L2 63 aa12.67□□□□□ -0.38
FARP1-214ENST00000595437 LOC105371267A0A1B0GV96 52 aa12.66□□□□□ -0.38
FARP1-214ENST00000595437 RAMP3O60896 148 aa12.66□□□□□ -0.38
FARP1-214ENST00000595437 SRSF3P84103 164 aaKnown RBP12.66□□□□□ -0.38
FARP1-214ENST00000595437 ICAM4Q14773 271 aa12.66□□□□□ -0.38
FARP1-214ENST00000595437 LRP11Q86VZ4 500 aa12.66□□□□□ -0.38
FARP1-214ENST00000595437 PSPNO60542 156 aa12.66□□□□□ -0.38
FARP1-214ENST00000595437 HLA-DQA1P01909 254 aa12.66□□□□□ -0.38
FARP1-214ENST00000595437 LCN2P80188 198 aa12.66□□□□□ -0.38
FARP1-214ENST00000595437 SAA2-SAA4A0A096LPE2 208 aa12.66□□□□□ -0.38
FARP1-214ENST00000595437 TRAV1-1A0A0B4J248 108 aa12.66□□□□□ -0.38
FARP1-214ENST00000595437 DKK1O94907 266 aa12.66□□□□□ -0.38
FARP1-214ENST00000595437 SAA2P0DJI9 122 aaPredicted RBP12.66□□□□□ -0.38
FARP1-214ENST00000595437 OR1P1Q8NH06 330 aa12.66□□□□□ -0.38
FARP1-214ENST00000595437 SDF2L1Q9HCN8 221 aa12.66□□□□□ -0.38
FARP1-214ENST00000595437 LOC105371242A0A075B767 164 aa12.66□□□□□ -0.38
FARP1-214ENST00000595437 ACAA1P09110 424 aaPredicted RBP12.66□□□□□ -0.38
FARP1-214ENST00000595437 RNASEH2CQ8TDP1 164 aaKnown RBP12.66□□□□□ -0.38
FARP1-214ENST00000595437 NPIPB3Q92617 1050 aa12.66□□□□□ -0.38
FARP1-214ENST00000595437 RNF166Q96A37 237 aaPredicted RBP12.66□□□□□ -0.38
FARP1-214ENST00000595437 IGKV3-15P01624 115 aa12.65□□□□□ -0.38
FARP1-214ENST00000595437 HNRNPA3P51991 378 aaKnown RBP12.65□□□□□ -0.38
FARP1-214ENST00000595437 PKIAP61925 76 aa12.65□□□□□ -0.38
FARP1-214ENST00000595437 RSPO1Q2MKA7 263 aaPredicted RBP12.65□□□□□ -0.38
FARP1-214ENST00000595437 IGHV3-21A0A0B4J1V1 117 aa12.65□□□□□ -0.38
FARP1-214ENST00000595437 UPK2O00526 184 aa12.65□□□□□ -0.38
FARP1-214ENST00000595437 C19orf35Q6ZS72 473 aa12.65□□□□□ -0.38
FARP1-214ENST00000595437 SFRP2Q96HF1 295 aa12.65□□□□□ -0.38
FARP1-214ENST00000595437 PRO1933Q9H354 126 aa12.65□□□□□ -0.38
FARP1-214ENST00000595437 KIAA1549LQ6ZVL6 1849 aa12.65□□□□□ -0.38
FARP1-214ENST00000595437 SSX7Q7RTT5 188 aa12.65□□□□□ -0.38
FARP1-214ENST00000595437 GLRX5Q86SX6 157 aa12.65□□□□□ -0.38
FARP1-214ENST00000595437 GBGT1Q8N5D6 347 aa12.65□□□□□ -0.38
FARP1-214ENST00000595437 NHLRC2Q8NBF2 726 aa12.65□□□□□ -0.38
FARP1-214ENST00000595437 OR5R1Q8NH85 324 aa12.65□□□□□ -0.38
FARP1-214ENST00000595437 NEU4Q8WWR8 484 aaPredicted RBP12.65□□□□□ -0.38
FARP1-214ENST00000595437 TRBV9A0A0B4J1U6 114 aa12.65□□□□□ -0.38
FARP1-214ENST00000595437 PGPA6NDG6 321 aa12.65□□□□□ -0.38
FARP1-214ENST00000595437 MFAP2P55001 183 aa12.65□□□□□ -0.38
FARP1-214ENST00000595437 TMEM144Q7Z5S9 345 aa12.65□□□□□ -0.38
FARP1-214ENST00000595437 ZNF383Q8NA42 475 aa12.65□□□□□ -0.38
FARP1-214ENST00000595437 EIF3GO75821 320 aaKnown RBP eCLIP12.64□□□□□ -0.39
FARP1-214ENST00000595437 IGHV1-46P01743 117 aa12.64□□□□□ -0.39
FARP1-214ENST00000595437 ELOBQ15370 118 aa12.64□□□□□ -0.39
FARP1-214ENST00000595437 M0R2Z0 102 aa12.64□□□□□ -0.39
FARP1-214ENST00000595437 LILRA1O75019 489 aa12.64□□□□□ -0.39
FARP1-214ENST00000595437 MDKP21741 143 aaPredicted RBP12.64□□□□□ -0.39
FARP1-214ENST00000595437 CRYBB3P26998 211 aa12.64□□□□□ -0.39
FARP1-214ENST00000595437 MFAP4P55083 255 aa12.64□□□□□ -0.39
FARP1-214ENST00000595437 Q6ZS92 163 aa12.64□□□□□ -0.39
FARP1-214ENST00000595437 WDR83OSQ9Y284 106 aa12.64□□□□□ -0.39
FARP1-214ENST00000595437 GPX4P36969 197 aaPredicted RBP12.64□□□□□ -0.39
FARP1-214ENST00000595437 KHDC1LQ5JSQ8 128 aa12.64□□□□□ -0.39
FARP1-214ENST00000595437 LINC01560Q8TB33 94 aa12.64□□□□□ -0.39
FARP1-214ENST00000595437 RNASE6Q93091 150 aaKnown RBP12.64□□□□□ -0.39
FARP1-214ENST00000595437 VKORC1Q9BQB6 163 aa12.64□□□□□ -0.39
FARP1-214ENST00000595437 MRPL20Q9BYC9 149 aaKnown RBP12.64□□□□□ -0.39
FARP1-214ENST00000595437 LPAR2Q9HBW0 351 aa12.64□□□□□ -0.39
FARP1-214ENST00000595437 ZNF581Q9P0T4 197 aa12.64□□□□□ -0.39
FARP1-214ENST00000595437 GCGP01275 180 aa12.64□□□□□ -0.39
FARP1-214ENST00000595437 ARF6P62330 175 aa12.64□□□□□ -0.39
FARP1-214ENST00000595437 A0A087X0M5 115 aa12.63□□□□□ -0.39
FARP1-214ENST00000595437 A0A1B0GX30 115 aa12.63□□□□□ -0.39
FARP1-214ENST00000595437 CA7P43166 264 aa12.63□□□□□ -0.39
FARP1-214ENST00000595437 RNFT1Q5M7Z0 435 aa12.63□□□□□ -0.39
FARP1-214ENST00000595437 PNKDQ8N490 385 aa12.63□□□□□ -0.39
FARP1-214ENST00000595437 TRGC1P0CF51 173 aa12.63□□□□□ -0.39
FARP1-214ENST00000595437 SNRNP40Q96DI7 357 aaKnown RBP12.63□□□□□ -0.39
FARP1-214ENST00000595437 IGKV1-5P01602 117 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms