RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 LINC01619G3V211 115 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 ACTL6BO94805 426 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 KBTBD11O94819 623 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 S1PR2O95136 353 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 NQO2P16083 231 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 INSL3P51460 131 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 PPP5CP53041 499 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 AP3S2P59780 193 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 RND3P61587 244 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 TNXAQ16473 311 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 POU2AF1Q16633 256 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 FAAP20Q6NZ36 180 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 UNQ5815/PRO19632Q6UWF5 114 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 SSX9Q7RTT3 188 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 TBC1D26Q86UD7 250 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 HAPLN4Q86UW8 402 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 ZNF429Q86V71 674 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 LFNGQ8NES3 379 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 OR4A5Q8NH83 315 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 TMEM167AQ8TBQ9 72 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 TRIM63Q969Q1 353 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 TMEM68Q96MH6 324 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 PRRT1Q99946 306 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 ZNF430Q9H8G1 570 aaPredicted RBP9.62□□□□□ -0.87
UPF1-203ENST00000594504 FAM212BQ9NTI7 297 aaPredicted RBP9.62□□□□□ -0.87
UPF1-203ENST00000594504 GAR1Q9NY12 217 aaKnown RBP9.62□□□□□ -0.87
UPF1-203ENST00000594504 SLC2A8Q9NY64 477 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 BET1LQ9NYM9 111 aa9.62□□□□□ -0.87
UPF1-203ENST00000594504 A6NHS1 94 aa9.61□□□□□ -0.87
UPF1-203ENST00000594504 C3orf84H3BNL1 204 aa9.61□□□□□ -0.87
UPF1-203ENST00000594504 GP9P14770 177 aa9.61□□□□□ -0.87
UPF1-203ENST00000594504 MAS1LP35410 378 aa9.61□□□□□ -0.87
UPF1-203ENST00000594504 FAUP35544 74 aaKnown RBP9.61□□□□□ -0.87
UPF1-203ENST00000594504 ERVK-16P61578 105 aa9.61□□□□□ -0.87
UPF1-203ENST00000594504 SURF2Q15527 256 aaPredicted RBP9.61□□□□□ -0.87
UPF1-203ENST00000594504 OR4A47Q6IF82 309 aa9.61□□□□□ -0.87
UPF1-203ENST00000594504 TOMM5Q8N4H5 51 aa9.61□□□□□ -0.87
UPF1-203ENST00000594504 OR13C8Q8NGS7 320 aa9.61□□□□□ -0.87
UPF1-203ENST00000594504 MARCH1Q8TCQ1 289 aa9.61□□□□□ -0.87
UPF1-203ENST00000594504 SRSF12Q8WXF0 261 aaKnown RBP9.61□□□□□ -0.87
UPF1-203ENST00000594504 DEDD2Q8WXF8 326 aa9.61□□□□□ -0.87
UPF1-203ENST00000594504 RCHY1Q96PM5 261 aa9.61□□□□□ -0.87
UPF1-203ENST00000594504 SRRQ9GZT4 340 aa9.61□□□□□ -0.87
UPF1-203ENST00000594504 SCP2D1Q9UJQ7 156 aa9.61□□□□□ -0.87
UPF1-203ENST00000594504 MARCH11A6NNE9 402 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 MPPED1O15442 326 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 CTSDP07339 412 aaPredicted RBP9.6□□□□□ -0.87
UPF1-203ENST00000594504 FGF2P09038 288 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 LGALS1P09382 135 aaKnown RBP9.6□□□□□ -0.87
UPF1-203ENST00000594504 FRMD6-AS1P0C7T7 363 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 PI3P19957 117 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 CD40LGP29965 261 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 LPAR6P43657 344 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 PIGPP57054 158 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 RPL8P62917 257 aaKnown RBP9.6□□□□□ -0.87
UPF1-203ENST00000594504 KLF9Q13886 244 aaPredicted RBP9.6□□□□□ -0.87
UPF1-203ENST00000594504 ZNF585BQ52M93 769 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 CASC10Q5T4H9 136 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 ACSM6Q6P461 480 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 GDPD1Q8N9F7 314 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 CCDC71LQ8N9Z2 235 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 DMBX1Q8NFW5 382 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 OR51S1Q8NGJ8 323 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 MRGPRFQ96AM1 343 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 PHB2Q99623 299 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 SPIN2AQ99865 258 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 SPIN2BQ9BPZ2 258 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 HRASLSQ9HDD0 168 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 MCUBQ9NWR8 336 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 COPZ2Q9P299 210 aa9.6□□□□□ -0.87
UPF1-203ENST00000594504 C14orf166Q9Y224 244 aaKnown RBP9.6□□□□□ -0.87
UPF1-203ENST00000594504 MSGN1A6NI15 193 aa9.59□□□□□ -0.87
UPF1-203ENST00000594504 H0Y980 276 aa9.59□□□□□ -0.87
UPF1-203ENST00000594504 SERPINE2P07093 398 aa9.59□□□□□ -0.87
UPF1-203ENST00000594504 ZNF45Q02386 682 aa9.59□□□□□ -0.87
UPF1-203ENST00000594504 CADM3Q8N126 398 aa9.59□□□□□ -0.87
UPF1-203ENST00000594504 MUC7Q8TAX7 377 aa9.59□□□□□ -0.87
UPF1-203ENST00000594504 SLA2Q9H6Q3 261 aa9.59□□□□□ -0.87
UPF1-203ENST00000594504 BATF3Q9NR55 127 aa9.59□□□□□ -0.87
UPF1-203ENST00000594504 TMEM140Q9NV12 185 aa9.59□□□□□ -0.87
UPF1-203ENST00000594504 C3orf85A0A1B0GTC6 90 aa9.58□□□□□ -0.88
UPF1-203ENST00000594504 H3BUA1 57 aa9.58□□□□□ -0.88
UPF1-203ENST00000594504 UPK2O00526 184 aa9.58□□□□□ -0.88
UPF1-203ENST00000594504 B3GALNT1O75752 331 aa9.58□□□□□ -0.88
UPF1-203ENST00000594504 KRASP01116 189 aa9.58□□□□□ -0.88
UPF1-203ENST00000594504 HSPB1P04792 205 aaKnown RBP9.58□□□□□ -0.88
UPF1-203ENST00000594504 IL6RP08887 468 aaPredicted RBP9.58□□□□□ -0.88
UPF1-203ENST00000594504 RPA2P15927 270 aa9.58□□□□□ -0.88
UPF1-203ENST00000594504 HLA-GP17693 338 aa9.58□□□□□ -0.88
UPF1-203ENST00000594504 RPL27AP46776 148 aaKnown RBP9.58□□□□□ -0.88
UPF1-203ENST00000594504 TPPP2P59282 170 aa9.58□□□□□ -0.88
UPF1-203ENST00000594504 CNPY1Q3B7I2 92 aa9.58□□□□□ -0.88
UPF1-203ENST00000594504 C10orf55Q5SWW7 151 aa9.58□□□□□ -0.88
UPF1-203ENST00000594504 LINC00299Q6ZSB3 139 aa9.58□□□□□ -0.88
UPF1-203ENST00000594504 SCGB3A2Q96PL1 93 aa9.58□□□□□ -0.88
UPF1-203ENST00000594504 GPR132Q9UNW8 380 aa9.58□□□□□ -0.88
UPF1-203ENST00000594504 HUWE1Q7Z6Z7 4374 aaKnown RBP9.58□□□□□ -0.88
UPF1-203ENST00000594504 BRI3O95415 125 aa9.57□□□□□ -0.88
UPF1-203ENST00000594504 G6PCP35575 357 aa9.57□□□□□ -0.88
UPF1-203ENST00000594504 INPP1P49441 399 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms