RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 SELENOKQ9Y6D0 94 aa17.93■□□□□ 0.46
LSM4-202ENST00000593564 TRBV7-1A0A0A6YYK4 115 aa17.92■□□□□ 0.46
LSM4-202ENST00000593564 CGB1A6NKQ9 187 aa17.92■□□□□ 0.46
LSM4-202ENST00000593564 RBFOX2O43251 390 aaKnown RBP eCLIP17.92■□□□□ 0.46
LSM4-202ENST00000593564 DEFA4P12838 97 aa17.92■□□□□ 0.46
LSM4-202ENST00000593564 ARPC4P59998 168 aa17.92■□□□□ 0.46
LSM4-202ENST00000593564 TIMM50Q3ZCQ8 353 aa17.92■□□□□ 0.46
LSM4-202ENST00000593564 SPAG16Q8N0X2 631 aa17.92■□□□□ 0.46
LSM4-202ENST00000593564 SPARTQ8N0X7 666 aa17.92■□□□□ 0.46
LSM4-202ENST00000593564 BEST4Q8NFU0 473 aa17.92■□□□□ 0.46
LSM4-202ENST00000593564 OR52B4Q8NGK2 314 aa17.92■□□□□ 0.46
LSM4-202ENST00000593564 OR13F1Q8NGS4 319 aa17.92■□□□□ 0.46
LSM4-202ENST00000593564 SECTM1Q8WVN6 248 aa17.92■□□□□ 0.46
LSM4-202ENST00000593564 CXorf58Q96LI9 332 aa17.92■□□□□ 0.46
LSM4-202ENST00000593564 CCL28Q9NRJ3 127 aa17.92■□□□□ 0.46
LSM4-202ENST00000593564 MFSD2BA6NFX1 497 aa17.91■□□□□ 0.46
LSM4-202ENST00000593564 TNFSF12O43508 249 aa17.91■□□□□ 0.46
LSM4-202ENST00000593564 REG1AP05451 166 aa17.91■□□□□ 0.46
LSM4-202ENST00000593564 CLEC3BP05452 202 aa17.91■□□□□ 0.46
LSM4-202ENST00000593564 FCGR2CP31995 323 aa17.91■□□□□ 0.46
LSM4-202ENST00000593564 SCAND1P57086 179 aa17.91■□□□□ 0.46
LSM4-202ENST00000593564 OR2B8PP59922 312 aa17.91■□□□□ 0.46
LSM4-202ENST00000593564 ZBTB34Q8NCN2 500 aa17.91■□□□□ 0.46
LSM4-202ENST00000593564 FCGR1BQ92637 280 aa17.91■□□□□ 0.46
LSM4-202ENST00000593564 HRASLSQ9HDD0 168 aa17.91■□□□□ 0.46
LSM4-202ENST00000593564 SSR3Q9UNL2 185 aa17.91■□□□□ 0.46
LSM4-202ENST00000593564 TAS2R31P59538 309 aa17.9■□□□□ 0.46
LSM4-202ENST00000593564 ANKRD55Q3KP44 614 aa17.9■□□□□ 0.46
LSM4-202ENST00000593564 HOGA1Q86XE5 327 aa17.9■□□□□ 0.46
LSM4-202ENST00000593564 MARC2Q969Z3 335 aa17.9■□□□□ 0.46
LSM4-202ENST00000593564 GGTLC1Q9BX51 225 aa17.9■□□□□ 0.46
LSM4-202ENST00000593564 SCAF4O95104 1147 aaKnown RBP17.89■□□□□ 0.45
LSM4-202ENST00000593564 PPYP01298 95 aa17.89■□□□□ 0.45
LSM4-202ENST00000593564 C8orf88P0DMB2 117 aa17.89■□□□□ 0.45
LSM4-202ENST00000593564 PTHLHP12272 177 aa17.89■□□□□ 0.45
LSM4-202ENST00000593564 SDC2P34741 201 aa17.89■□□□□ 0.45
LSM4-202ENST00000593564 POU2AF1Q16633 256 aa17.89■□□□□ 0.45
LSM4-202ENST00000593564 TM4SF20Q53R12 229 aa17.89■□□□□ 0.45
LSM4-202ENST00000593564 BTNL8Q6UX41 500 aa17.89■□□□□ 0.45
LSM4-202ENST00000593564 UNQ9165/PRO28630Q6UXU0 137 aa17.89■□□□□ 0.45
LSM4-202ENST00000593564 GVQW1Q8N7I0 195 aa17.89■□□□□ 0.45
LSM4-202ENST00000593564 ZNF502Q8TBZ5 544 aa17.89■□□□□ 0.45
LSM4-202ENST00000593564 SLC25A38Q96DW6 304 aa17.89■□□□□ 0.45
LSM4-202ENST00000593564 SRSF8Q9BRL6 282 aaKnown RBP17.89■□□□□ 0.45
LSM4-202ENST00000593564 ETV7Q9Y603 341 aa17.89■□□□□ 0.45
LSM4-202ENST00000593564 TRAV18A0A075B6X5 111 aa17.88■□□□□ 0.45
LSM4-202ENST00000593564 TRAV25A0A0B4J276 109 aa17.88■□□□□ 0.45
LSM4-202ENST00000593564 IGLC7A0M8Q6 106 aa17.88■□□□□ 0.45
LSM4-202ENST00000593564 CATR1Q13166 79 aa17.88■□□□□ 0.45
LSM4-202ENST00000593564 LOC102724200A0A096LPH7 203 aaPredicted RBP17.87■□□□□ 0.45
LSM4-202ENST00000593564 A0A0A6YYH2 397 aa17.87■□□□□ 0.45
LSM4-202ENST00000593564 A6NJ64 397 aa17.87■□□□□ 0.45
LSM4-202ENST00000593564 SULT1C2O00338 296 aa17.87■□□□□ 0.45
LSM4-202ENST00000593564 UPK2O00526 184 aa17.87■□□□□ 0.45
LSM4-202ENST00000593564 HPRT1P00492 218 aa17.87■□□□□ 0.45
LSM4-202ENST00000593564 FGF2P09038 288 aa17.87■□□□□ 0.45
LSM4-202ENST00000593564 NQO2P16083 231 aa17.87■□□□□ 0.45
LSM4-202ENST00000593564 GPR183P32249 361 aa17.87■□□□□ 0.45
LSM4-202ENST00000593564 ZNF773Q6PK81 442 aa17.87■□□□□ 0.45
LSM4-202ENST00000593564 OR5H6Q8NGV6 325 aa17.87■□□□□ 0.45
LSM4-202ENST00000593564 OVOL2Q9BRP0 275 aa17.87■□□□□ 0.45
LSM4-202ENST00000593564 SLC5A7Q9GZV3 580 aa17.87■□□□□ 0.45
LSM4-202ENST00000593564 MRPL27Q9P0M9 148 aaKnown RBP17.87■□□□□ 0.45
LSM4-202ENST00000593564 TRAV3A0A0B4J244 114 aa17.86■□□□□ 0.45
LSM4-202ENST00000593564 PTBP1P26599 531 aaKnown RBP eCLIP17.86■□□□□ 0.45
LSM4-202ENST00000593564 ELLP55199 621 aaPredicted RBP17.86■□□□□ 0.45
LSM4-202ENST00000593564 COMMD5Q9GZQ3 224 aa17.86■□□□□ 0.45
LSM4-202ENST00000593564 THYN1Q9P016 225 aa17.86■□□□□ 0.45
LSM4-202ENST00000593564 UFC1Q9Y3C8 167 aa17.86■□□□□ 0.45
LSM4-202ENST00000593564 CLEC2LP0C7M8 214 aa17.85■□□□□ 0.45
LSM4-202ENST00000593564 MXD1Q05195 221 aa17.85■□□□□ 0.45
LSM4-202ENST00000593564 ZNF585BQ52M93 769 aa17.85■□□□□ 0.45
LSM4-202ENST00000593564 PLET1Q6UQ28 207 aa17.85■□□□□ 0.45
LSM4-202ENST00000593564 RBPMS2Q6ZRY4 209 aaKnown RBP17.85■□□□□ 0.45
LSM4-202ENST00000593564 OR1L6Q8NGR2 347 aa17.85■□□□□ 0.45
LSM4-202ENST00000593564 QTRT1Q9BXR0 403 aaKnown RBP17.85■□□□□ 0.45
LSM4-202ENST00000593564 ZNF436Q9C0F3 470 aaPredicted RBP17.85■□□□□ 0.45
LSM4-202ENST00000593564 PLEKHA2Q9HB19 425 aa17.85■□□□□ 0.45
LSM4-202ENST00000593564 TMEM140Q9NV12 185 aa17.85■□□□□ 0.45
LSM4-202ENST00000593564 FXYD4P59646 89 aa17.84■□□□□ 0.45
LSM4-202ENST00000593564 THOC7Q6I9Y2 204 aaKnown RBP17.84■□□□□ 0.45
LSM4-202ENST00000593564 ZNF818PQ6ZRF7 136 aa17.84■□□□□ 0.45
LSM4-202ENST00000593564 CD300LFQ8TDQ1 290 aa17.84■□□□□ 0.45
LSM4-202ENST00000593564 VN1R17PQ8TDU5 208 aa17.84■□□□□ 0.45
LSM4-202ENST00000593564 GIMAP1Q8WWP7 306 aa17.84■□□□□ 0.45
LSM4-202ENST00000593564 AUNIPQ9H7T9 357 aa17.84■□□□□ 0.45
LSM4-202ENST00000593564 IDNKQ5T6J7 187 aa17.83■□□□□ 0.44
LSM4-202ENST00000593564 DMBX1Q8NFW5 382 aa17.83■□□□□ 0.44
LSM4-202ENST00000593564 OR51H1Q8NH63 302 aa17.83■□□□□ 0.44
LSM4-202ENST00000593564 YTHDF1Q9BYJ9 559 aaKnown RBP17.83■□□□□ 0.44
LSM4-202ENST00000593564 C5orf66Q9H5L9 145 aa17.83■□□□□ 0.44
LSM4-202ENST00000593564 IGHV3-35A0A0C4DH35 117 aa17.82■□□□□ 0.44
LSM4-202ENST00000593564 CYB5BO43169 146 aa17.82■□□□□ 0.44
LSM4-202ENST00000593564 TGOLN2O43493 480 aa17.82■□□□□ 0.44
LSM4-202ENST00000593564 S1PR2O95136 353 aa17.82■□□□□ 0.44
LSM4-202ENST00000593564 CBX5P45973 191 aa17.82■□□□□ 0.44
LSM4-202ENST00000593564 AADACL3Q5VUY0 350 aa17.82■□□□□ 0.44
LSM4-202ENST00000593564 OR2C3Q8N628 320 aa17.82■□□□□ 0.44
LSM4-202ENST00000593564 GDPD1Q8N9F7 314 aa17.82■□□□□ 0.44
LSM4-202ENST00000593564 OR5AP2Q8NGF4 316 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms