RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 VENTXO95231 258 aa10.8□□□□□ -0.68
VMP1-217ENST00000593168 LY86O95711 162 aa10.8□□□□□ -0.68
VMP1-217ENST00000593168 FGF2P09038 288 aa10.8□□□□□ -0.68
VMP1-217ENST00000593168 SAA1P0DJI8 122 aaPredicted RBP10.8□□□□□ -0.68
VMP1-217ENST00000593168 SAA4P35542 130 aa10.8□□□□□ -0.68
VMP1-217ENST00000593168 TAS2R30P59541 319 aa10.8□□□□□ -0.68
VMP1-217ENST00000593168 SPCS3P61009 180 aa10.8□□□□□ -0.68
VMP1-217ENST00000593168 VAMP2P63027 116 aa10.8□□□□□ -0.68
VMP1-217ENST00000593168 EBI3Q14213 229 aa10.8□□□□□ -0.68
VMP1-217ENST00000593168 VMA21Q3ZAQ7 101 aa10.8□□□□□ -0.68
VMP1-217ENST00000593168 DYNAPQ8N1N2 210 aa10.8□□□□□ -0.68
VMP1-217ENST00000593168 KCNRGQ8N5I3 272 aa10.8□□□□□ -0.68
VMP1-217ENST00000593168 TMEM167AQ8TBQ9 72 aa10.8□□□□□ -0.68
VMP1-217ENST00000593168 C17orf50Q8WW18 174 aa10.8□□□□□ -0.68
VMP1-217ENST00000593168 SMIM8Q96KF7 97 aa10.8□□□□□ -0.68
VMP1-217ENST00000593168 QTRT1Q9BXR0 403 aaKnown RBP10.8□□□□□ -0.68
VMP1-217ENST00000593168 PLSCR3Q9NRY6 295 aa10.8□□□□□ -0.68
VMP1-217ENST00000593168 FKBP11Q9NYL4 201 aa10.8□□□□□ -0.68
VMP1-217ENST00000593168 FOXA2Q9Y261 457 aaPredicted RBP10.8□□□□□ -0.68
VMP1-217ENST00000593168 WSB1Q9Y6I7 421 aa10.8□□□□□ -0.68
VMP1-217ENST00000593168 TRAV40A0A0B4J280 105 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 SSSCA1O60232 199 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 GPR137BO60478 399 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 NXPH3O95157 252 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 SPDEFO95238 335 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 CRYGBP07316 175 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 HKR1P10072 659 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 S100A11P31949 105 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 BRS3P32247 399 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 PAX9P55771 341 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 BPIFB3P59826 476 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 HSPE1P61604 102 aaKnown RBP10.79□□□□□ -0.68
VMP1-217ENST00000593168 FAM120AOSQ5T036 256 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 TMUB2Q71RG4 321 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 THNSL2Q86YJ6 484 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 OR2C3Q8N628 320 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 OR2T10Q8NGZ9 312 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 RBMXL1Q96E39 390 aaKnown RBP10.79□□□□□ -0.68
VMP1-217ENST00000593168 RITA1Q96K30 269 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 RBKSQ9H477 322 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 TMEM14BQ9NUH8 114 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 ZNF257Q9Y2Q1 563 aa10.79□□□□□ -0.68
VMP1-217ENST00000593168 MSGN1A6NI15 193 aa10.78□□□□□ -0.68
VMP1-217ENST00000593168 TMEM50AO95807 157 aa10.78□□□□□ -0.68
VMP1-217ENST00000593168 MOSP00540 346 aa10.78□□□□□ -0.68
VMP1-217ENST00000593168 AVPP01185 164 aa10.78□□□□□ -0.68
VMP1-217ENST00000593168 IFNA17P01571 189 aa10.78□□□□□ -0.68
VMP1-217ENST00000593168 IGHV4-38-2P0DP08 117 aa10.78□□□□□ -0.68
VMP1-217ENST00000593168 RPL12P30050 165 aaKnown RBP10.78□□□□□ -0.68
VMP1-217ENST00000593168 OR2B8PP59922 312 aa10.78□□□□□ -0.68
VMP1-217ENST00000593168 RPL23AP62750 156 aaKnown RBP10.78□□□□□ -0.68
VMP1-217ENST00000593168 OPCMLQ14982 345 aa10.78□□□□□ -0.68
VMP1-217ENST00000593168 PSG5Q15238 335 aa10.78□□□□□ -0.68
VMP1-217ENST00000593168 KLF17Q5JT82 389 aaPredicted RBP10.78□□□□□ -0.68
VMP1-217ENST00000593168 NPBQ8NG41 125 aa10.78□□□□□ -0.68
VMP1-217ENST00000593168 EAF1Q96JC9 268 aaPredicted RBP10.78□□□□□ -0.68
VMP1-217ENST00000593168 CIB3Q96Q77 187 aaPredicted RBP10.78□□□□□ -0.68
VMP1-217ENST00000593168 GON7Q9BXV9 100 aa10.78□□□□□ -0.68
VMP1-217ENST00000593168 ARL6Q9H0F7 186 aa10.78□□□□□ -0.68
VMP1-217ENST00000593168 MEGF9Q9H1U4 602 aa10.78□□□□□ -0.68
VMP1-217ENST00000593168 LYRM2Q9NU23 88 aaPredicted RBP10.78□□□□□ -0.68
VMP1-217ENST00000593168 SLC25A17O43808 307 aa10.77□□□□□ -0.69
VMP1-217ENST00000593168 TSC22D2O75157 780 aa10.77□□□□□ -0.69
VMP1-217ENST00000593168 IGKV1D-33P01593 117 aa10.77□□□□□ -0.69
VMP1-217ENST00000593168 IGKV1-33P01594 117 aa10.77□□□□□ -0.69
VMP1-217ENST00000593168 FAM106CPP0CH98 169 aa10.77□□□□□ -0.69
VMP1-217ENST00000593168 DYNLT3P51808 116 aa10.77□□□□□ -0.69
VMP1-217ENST00000593168 AP2S1P53680 142 aaPredicted RBP10.77□□□□□ -0.69
VMP1-217ENST00000593168 RPL8P62917 257 aaKnown RBP10.77□□□□□ -0.69
VMP1-217ENST00000593168 RUSC1-AS1Q66K80 236 aa10.77□□□□□ -0.69
VMP1-217ENST00000593168 MMD2Q8IY49 270 aa10.77□□□□□ -0.69
VMP1-217ENST00000593168 TMEM252Q8N6L7 170 aa10.77□□□□□ -0.69
VMP1-217ENST00000593168 OR5B3Q8NH48 314 aa10.77□□□□□ -0.69
VMP1-217ENST00000593168 SLC25A31Q9H0C2 315 aa10.77□□□□□ -0.69
VMP1-217ENST00000593168 OR51B2Q9Y5P1 312 aa10.77□□□□□ -0.69
VMP1-217ENST00000593168 IGHV3OR16-10A0A075B7F0 116 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 KANTRA0A1W2PQU2 76 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 FAM24AA6NFZ4 105 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 CEBPZOSA8MTT3 80 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 TAAR5O14804 337 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 KCNAB3O43448 404 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 SNRNP70P08621 437 aaKnown RBP10.76□□□□□ -0.69
VMP1-217ENST00000593168 PAX6P26367 422 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 MAS1LP35410 378 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 CAV2P51636 162 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 BRD3OSQ6XYD6 125 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 Q8N6K4 173 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 OR1L8Q8NGR8 309 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 DTD1Q8TEA8 209 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 COMMD5Q9GZQ3 224 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 ZC4H2Q9NQZ6 224 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 PSENENQ9NZ42 101 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 NUP50Q9UKX7 468 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 TCF19Q9Y242 345 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 SIGLEC9Q9Y336 463 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 TNCP24821 2201 aa10.76□□□□□ -0.69
VMP1-217ENST00000593168 TEX50A0A1B0GTY4 177 aa10.75□□□□□ -0.69
VMP1-217ENST00000593168 RRHO14718 337 aa10.75□□□□□ -0.69
VMP1-217ENST00000593168 NBR2O15453 112 aa10.75□□□□□ -0.69
VMP1-217ENST00000593168 BCL2L11O43521 198 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms