RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 RORCP51449 518 aa10.58□□□□□ -0.72
APOC1-208ENST00000592535 POU2AF1Q16633 256 aa10.58□□□□□ -0.72
APOC1-208ENST00000592535 TATDN3Q17R31 274 aa10.58□□□□□ -0.72
APOC1-208ENST00000592535 C15orf32Q32M92 178 aa10.58□□□□□ -0.72
APOC1-208ENST00000592535 SNX29P2Q8IUI4 249 aa10.58□□□□□ -0.72
APOC1-208ENST00000592535 BORCS5Q969J3 196 aa10.58□□□□□ -0.72
APOC1-208ENST00000592535 WWC2-AS2Q96NR7 200 aa10.58□□□□□ -0.72
APOC1-208ENST00000592535 FANCD2OSQ96PS1 177 aa10.58□□□□□ -0.72
APOC1-208ENST00000592535 AIFM2Q9BRQ8 373 aa10.58□□□□□ -0.72
APOC1-208ENST00000592535 PLEKHA2Q9HB19 425 aa10.58□□□□□ -0.72
APOC1-208ENST00000592535 FBXL7Q9UJT9 491 aa10.58□□□□□ -0.72
APOC1-208ENST00000592535 U3KQK5 164 aa10.58□□□□□ -0.72
APOC1-208ENST00000592535 UPK2O00526 184 aa10.57□□□□□ -0.72
APOC1-208ENST00000592535 PGLYRP1O75594 196 aaPredicted RBP10.57□□□□□ -0.72
APOC1-208ENST00000592535 NDUFB8O95169 186 aa10.57□□□□□ -0.72
APOC1-208ENST00000592535 REG1AP05451 166 aa10.57□□□□□ -0.72
APOC1-208ENST00000592535 CRYGCP07315 174 aa10.57□□□□□ -0.72
APOC1-208ENST00000592535 RPA2P15927 270 aa10.57□□□□□ -0.72
APOC1-208ENST00000592535 CTRB1P17538 263 aa10.57□□□□□ -0.72
APOC1-208ENST00000592535 PSMB6P28072 239 aa10.57□□□□□ -0.72
APOC1-208ENST00000592535 OR2B8PP59922 312 aa10.57□□□□□ -0.72
APOC1-208ENST00000592535 CTRB2Q6GPI1 263 aa10.57□□□□□ -0.72
APOC1-208ENST00000592535 OR6F1Q8NGZ6 308 aa10.57□□□□□ -0.72
APOC1-208ENST00000592535 DYNC2LI1Q8TCX1 351 aa10.57□□□□□ -0.72
APOC1-208ENST00000592535 CD300LFQ8TDQ1 290 aa10.57□□□□□ -0.72
APOC1-208ENST00000592535 TMEM140Q9NV12 185 aa10.57□□□□□ -0.72
APOC1-208ENST00000592535 COMMD9Q9P000 198 aa10.57□□□□□ -0.72
APOC1-208ENST00000592535 S4R3C0 116 aa10.57□□□□□ -0.72
APOC1-208ENST00000592535 CCDC160A6NGH7 325 aa10.56□□□□□ -0.72
APOC1-208ENST00000592535 PPP5D1E7EU14 171 aa10.56□□□□□ -0.72
APOC1-208ENST00000592535 IGHV3-23P01764 117 aa10.56□□□□□ -0.72
APOC1-208ENST00000592535 FRMD6-AS1P0C7T7 363 aa10.56□□□□□ -0.72
APOC1-208ENST00000592535 CNPY1Q3B7I2 92 aa10.56□□□□□ -0.72
APOC1-208ENST00000592535 SBSPONQ8IVN8 264 aa10.56□□□□□ -0.72
APOC1-208ENST00000592535 Q8N1Y9 231 aa10.56□□□□□ -0.72
APOC1-208ENST00000592535 DMBX1Q8NFW5 382 aa10.56□□□□□ -0.72
APOC1-208ENST00000592535 SCPEP1Q9HB40 452 aa10.56□□□□□ -0.72
APOC1-208ENST00000592535 DMRT1Q9Y5R6 373 aa10.56□□□□□ -0.72
APOC1-208ENST00000592535 IGLC7A0M8Q6 106 aa10.55□□□□□ -0.72
APOC1-208ENST00000592535 FAM25AB3EWG3 89 aa10.55□□□□□ -0.72
APOC1-208ENST00000592535 FAM25CB3EWG5 89 aa10.55□□□□□ -0.72
APOC1-208ENST00000592535 FAM25GB3EWG6 89 aa10.55□□□□□ -0.72
APOC1-208ENST00000592535 GPR31O00270 319 aa10.55□□□□□ -0.72
APOC1-208ENST00000592535 DHFRP00374 187 aa10.55□□□□□ -0.72
APOC1-208ENST00000592535 HLA-AP01891 365 aaKnown RBP10.55□□□□□ -0.72
APOC1-208ENST00000592535 F2RP25116 425 aa10.55□□□□□ -0.72
APOC1-208ENST00000592535 RCVRNP35243 200 aa10.55□□□□□ -0.72
APOC1-208ENST00000592535 LPAR6P43657 344 aa10.55□□□□□ -0.72
APOC1-208ENST00000592535 TSPAN5P62079 268 aa10.55□□□□□ -0.72
APOC1-208ENST00000592535 KLK9Q2XQG4 91 aa10.55□□□□□ -0.72
APOC1-208ENST00000592535 RNASE12Q5GAN4 147 aaKnown RBP10.55□□□□□ -0.72
APOC1-208ENST00000592535 MZT2AQ6P582 158 aa10.55□□□□□ -0.72
APOC1-208ENST00000592535 FCAMRQ8WWV6 532 aa10.55□□□□□ -0.72
APOC1-208ENST00000592535 CCDC140Q96MF4 163 aa10.55□□□□□ -0.72
APOC1-208ENST00000592535 COMMD5Q9GZQ3 224 aa10.55□□□□□ -0.72
APOC1-208ENST00000592535 SIGLEC8Q9NYZ4 499 aa10.55□□□□□ -0.72
APOC1-208ENST00000592535 PEMTQ9UBM1 199 aa10.55□□□□□ -0.72
APOC1-208ENST00000592535 KLK9Q9UKQ9 250 aa10.55□□□□□ -0.72
APOC1-208ENST00000592535 IGLV11-55A0A075B6I3 123 aa10.54□□□□□ -0.72
APOC1-208ENST00000592535 IZUMO1RA6ND01 250 aa10.54□□□□□ -0.72
APOC1-208ENST00000592535 MARCH11A6NNE9 402 aa10.54□□□□□ -0.72
APOC1-208ENST00000592535 H0Y980 276 aa10.54□□□□□ -0.72
APOC1-208ENST00000592535 NOL3O60936 208 aaKnown RBP10.54□□□□□ -0.72
APOC1-208ENST00000592535 OR2C1O95371 312 aa10.54□□□□□ -0.72
APOC1-208ENST00000592535 DEFA4P12838 97 aa10.54□□□□□ -0.72
APOC1-208ENST00000592535 HIST1H1BP16401 226 aaKnown RBP10.54□□□□□ -0.72
APOC1-208ENST00000592535 ZNF182P17025 639 aaPredicted RBP10.54□□□□□ -0.72
APOC1-208ENST00000592535 ERVK-16P61578 105 aa10.54□□□□□ -0.72
APOC1-208ENST00000592535 ZNF585BQ52M93 769 aa10.54□□□□□ -0.72
APOC1-208ENST00000592535 PHLDA2Q53GA4 152 aa10.54□□□□□ -0.72
APOC1-208ENST00000592535 FAM209BQ5JX69 171 aa10.54□□□□□ -0.72
APOC1-208ENST00000592535 CLEC19AQ6UXS0 136 aa10.54□□□□□ -0.72
APOC1-208ENST00000592535 ADAMTSL5Q6ZMM2 481 aa10.54□□□□□ -0.72
APOC1-208ENST00000592535 CMTM1Q8IZ96 169 aa10.54□□□□□ -0.72
APOC1-208ENST00000592535 AP3S1Q92572 193 aa10.54□□□□□ -0.72
APOC1-208ENST00000592535 MFSD2BA6NFX1 497 aa10.53□□□□□ -0.72
APOC1-208ENST00000592535 M0QYG6 137 aa10.53□□□□□ -0.72
APOC1-208ENST00000592535 GGCTO75223 188 aaKnown RBP10.53□□□□□ -0.72
APOC1-208ENST00000592535 IGHV4-30-4P0DP06 118 aa10.53□□□□□ -0.72
APOC1-208ENST00000592535 EDN2P20800 178 aa10.53□□□□□ -0.72
APOC1-208ENST00000592535 G6PCP35575 357 aa10.53□□□□□ -0.72
APOC1-208ENST00000592535 MECP2P51608 486 aaKnown RBP10.53□□□□□ -0.72
APOC1-208ENST00000592535 LCN12Q6JVE5 192 aa10.53□□□□□ -0.72
APOC1-208ENST00000592535 Q8N402 240 aa10.53□□□□□ -0.72
APOC1-208ENST00000592535 OR10W1Q8NGF6 305 aa10.53□□□□□ -0.72
APOC1-208ENST00000592535 EEF1AKMT3Q96AZ1 226 aa10.53□□□□□ -0.72
APOC1-208ENST00000592535 QTRT1Q9BXR0 403 aaKnown RBP10.53□□□□□ -0.72
APOC1-208ENST00000592535 EXTL2Q9UBQ6 330 aa10.53□□□□□ -0.72
APOC1-208ENST00000592535 NSG2Q9Y328 171 aa10.53□□□□□ -0.72
APOC1-208ENST00000592535 TEX50A0A1B0GTY4 177 aa10.52□□□□□ -0.73
APOC1-208ENST00000592535 KRASP01116 189 aa10.52□□□□□ -0.73
APOC1-208ENST00000592535 FGF2P09038 288 aa10.52□□□□□ -0.73
APOC1-208ENST00000592535 TRAPPC2P0DI81 140 aa10.52□□□□□ -0.73
APOC1-208ENST00000592535 TRAPPC2BP0DI82 140 aa10.52□□□□□ -0.73
APOC1-208ENST00000592535 ARL3P36405 182 aa10.52□□□□□ -0.73
APOC1-208ENST00000592535 LPCAT3Q6P1A2 487 aa10.52□□□□□ -0.73
APOC1-208ENST00000592535 TBC1D26Q86UD7 250 aa10.52□□□□□ -0.73
APOC1-208ENST00000592535 SGPP2Q8IWX5 399 aa10.52□□□□□ -0.73
APOC1-208ENST00000592535 OR52I2Q8NH67 350 aa10.52□□□□□ -0.73
APOC1-208ENST00000592535 SRSF8Q9BRL6 282 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms