RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 MEF2BQ02080 365 aaPredicted RBP12.86□□□□□ -0.35
MBD1-227ENST00000592060 ZNF596Q8TC21 504 aa12.86□□□□□ -0.35
MBD1-227ENST00000592060 C1orf159Q96HA4 380 aa12.86□□□□□ -0.35
MBD1-227ENST00000592060 MGST2Q99735 147 aa12.86□□□□□ -0.35
MBD1-227ENST00000592060 MRPL20Q9BYC9 149 aaKnown RBP12.86□□□□□ -0.35
MBD1-227ENST00000592060 PRNDQ9UKY0 176 aa12.86□□□□□ -0.35
MBD1-227ENST00000592060 PIEZO2Q9H5I5 2752 aa12.86□□□□□ -0.35
MBD1-227ENST00000592060 NBEAQ8NFP9 2946 aa12.86□□□□□ -0.35
MBD1-227ENST00000592060 SMCO3A2RU48 225 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 SRRM4A7MD48 611 aaKnown RBP12.85□□□□□ -0.35
MBD1-227ENST00000592060 C1orf196B1AJZ1 125 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 YIF1AO95070 293 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 PLAUP00749 431 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 DEFA4P12838 97 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 NPY1RP25929 384 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 OPRK1P41145 380 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 CDC34P49427 236 aaPredicted RBP12.85□□□□□ -0.35
MBD1-227ENST00000592060 LRRC10Q5BKY1 277 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 SLC24A4Q8NFF2 622 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 H1FXQ92522 213 aaKnown RBP12.85□□□□□ -0.35
MBD1-227ENST00000592060 GGTLC1Q9BX51 225 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 MANBALQ9NQG1 85 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 OR51B2Q9Y5P1 312 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 B4DEV8 164 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 B9A039 149 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 DVL1O14640 695 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 CYB5BO43169 146 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 CASP6P55212 293 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 PNRC1Q12796 327 aaPredicted RBP12.85□□□□□ -0.35
MBD1-227ENST00000592060 WDR25Q64LD2 544 aaPredicted RBP12.85□□□□□ -0.35
MBD1-227ENST00000592060 C8orf31Q8N9H6 132 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 GATAD1Q8WUU5 269 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 SDF2L1Q9HCN8 221 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 SIRT7Q9NRC8 400 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 ZNF257Q9Y2Q1 563 aa12.85□□□□□ -0.35
MBD1-227ENST00000592060 LSM4Q9Y4Z0 139 aaKnown RBP12.85□□□□□ -0.35
MBD1-227ENST00000592060 FAM90A27PA6NNH2 459 aa12.84□□□□□ -0.35
MBD1-227ENST00000592060 PRCDQ00LT1 54 aa12.84□□□□□ -0.35
MBD1-227ENST00000592060 ARSJQ5FYB0 599 aaPredicted RBP12.84□□□□□ -0.35
MBD1-227ENST00000592060 GCSAMLQ5JQS6 135 aa12.84□□□□□ -0.35
MBD1-227ENST00000592060 LINC00311Q8N616 119 aa12.84□□□□□ -0.35
MBD1-227ENST00000592060 RAB1CQ92928 201 aa12.84□□□□□ -0.35
MBD1-227ENST00000592060 BET1LQ9NYM9 111 aa12.84□□□□□ -0.35
MBD1-227ENST00000592060 IGHV1-69-2A0A0G2JMI3 117 aa12.83□□□□□ -0.35
MBD1-227ENST00000592060 H0YJW9 148 aa12.83□□□□□ -0.35
MBD1-227ENST00000592060 SIAH2O43255 324 aa12.83□□□□□ -0.35
MBD1-227ENST00000592060 CA2P00918 260 aa12.83□□□□□ -0.35
MBD1-227ENST00000592060 IFNA4P05014 189 aa12.83□□□□□ -0.35
MBD1-227ENST00000592060 SAA1P0DJI8 122 aaPredicted RBP12.83□□□□□ -0.35
MBD1-227ENST00000592060 PSMB3P49720 205 aa12.83□□□□□ -0.35
MBD1-227ENST00000592060 TMEM249Q2WGJ8 235 aa12.83□□□□□ -0.35
MBD1-227ENST00000592060 TMEM155Q4W5P6 130 aa12.83□□□□□ -0.35
MBD1-227ENST00000592060 FAM71F2Q6NXP2 309 aa12.83□□□□□ -0.35
MBD1-227ENST00000592060 ST6GALNAC3Q8NDV1 305 aa12.83□□□□□ -0.35
MBD1-227ENST00000592060 OR5AN1Q8NGI8 311 aa12.83□□□□□ -0.35
MBD1-227ENST00000592060 LINC01560Q8TB33 94 aa12.83□□□□□ -0.35
MBD1-227ENST00000592060 ENY2Q9NPA8 101 aa12.83□□□□□ -0.35
MBD1-227ENST00000592060 CXorf65A6NEN9 183 aa12.83□□□□□ -0.36
MBD1-227ENST00000592060 TMEM250H0YL14 139 aa12.83□□□□□ -0.36
MBD1-227ENST00000592060 KBTBD11O94819 623 aa12.83□□□□□ -0.36
MBD1-227ENST00000592060 GRNP28799 593 aaKnown RBP12.83□□□□□ -0.36
MBD1-227ENST00000592060 CHRNB4P30926 498 aa12.83□□□□□ -0.36
MBD1-227ENST00000592060 KLRB1Q12918 225 aa12.83□□□□□ -0.36
MBD1-227ENST00000592060 OSR1Q8TAX0 266 aaPredicted RBP12.83□□□□□ -0.36
MBD1-227ENST00000592060 CHD6Q8TD26 2715 aa12.82□□□□□ -0.36
MBD1-227ENST00000592060 CEP295Q9C0D2 2601 aa12.82□□□□□ -0.36
MBD1-227ENST00000592060 APOA2P02652 100 aa12.82□□□□□ -0.36
MBD1-227ENST00000592060 ELOBQ15370 118 aa12.82□□□□□ -0.36
MBD1-227ENST00000592060 TMEM177Q53S58 311 aa12.82□□□□□ -0.36
MBD1-227ENST00000592060 PXMP4Q9Y6I8 212 aa12.82□□□□□ -0.36
MBD1-227ENST00000592060 CHD8Q9HCK8 2581 aa12.82□□□□□ -0.36
MBD1-227ENST00000592060 ROS1P08922 2347 aa12.82□□□□□ -0.36
MBD1-227ENST00000592060 BAHCC1Q9P281 2608 aa12.82□□□□□ -0.36
MBD1-227ENST00000592060 A0A087X0M5 115 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 TEX50A0A1B0GTY4 177 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 A0A1B0GX30 115 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 FNDC10F2Z333 226 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 J3QR06 171 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 MIC13Q5XKP0 118 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 ZNF343Q6P1L6 599 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 Q8WTZ3 238 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 ST6GALNAC6Q969X2 333 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 PLEKHA3Q9HB20 300 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 NPVFQ9HCQ7 196 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 PRELID1Q9Y255 219 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 CCL21O00585 134 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 ZNF137PP52743 207 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 BSXQ3C1V8 233 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 CYP2G1PQ6ZSU1 146 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 C1QL4Q86Z23 238 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 HARBI1Q96MB7 349 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 NABP2Q9BQ15 211 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 SMIM7Q9BQ49 75 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 HINT2Q9BX68 163 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 NAT8Q9UHE5 227 aa12.81□□□□□ -0.36
MBD1-227ENST00000592060 TLN1Q9Y490 2541 aaKnown RBP12.8□□□□□ -0.36
MBD1-227ENST00000592060 POLEQ07864 2286 aa12.8□□□□□ -0.36
MBD1-227ENST00000592060 PKDREJQ9NTG1 2253 aa12.8□□□□□ -0.36
MBD1-227ENST00000592060 PAGE4O60829 102 aa12.8□□□□□ -0.36
MBD1-227ENST00000592060 CXCL1P09341 107 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms