RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 TGFBR3LH3BV60 316 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 LMX1BO60663 402 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 ZNF324O75467 553 aaPredicted RBP11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 EIF3GO75821 320 aaKnown RBP eCLIP11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 C16orf92Q96LL3 132 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 WFDC6Q9BQY6 131 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 GGACTQ9BVM4 153 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 KLF4O43474 513 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 S1PR2O95136 353 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 TRGC1P0CF51 173 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 EGR4Q05215 589 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 ADIPOQQ15848 244 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 C19orf54Q5BKX5 351 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 PSMG4Q5JS54 123 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 REC114Q7Z4M0 266 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 TMEM183AQ8IXX5 376 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 RARRES2Q99969 163 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 CBLN4Q9NTU7 201 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 SLC25A53Q5H9E4 307 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 SFRP2Q96HF1 295 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 IGHV3-21A0A0B4J1V1 117 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 IGHV1-2P23083 117 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 SRIP30626 198 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 MTURNQ8N3F0 131 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 PARD6GQ9BYG4 376 aaPredicted RBP11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 C7orf69Q9H7B7 122 aa11.3□□□□□ -0.6
SMARCA4-216ENST00000591545 RNFT1Q5M7Z0 435 aa11.29□□□□□ -0.6
SMARCA4-216ENST00000591545 RNF224P0DH78 156 aa11.29□□□□□ -0.6
SMARCA4-216ENST00000591545 LINC00469Q8N7U9 141 aa11.29□□□□□ -0.6
SMARCA4-216ENST00000591545 ZG16O60844 167 aa11.29□□□□□ -0.6
SMARCA4-216ENST00000591545 LHX2P50458 406 aa11.29□□□□□ -0.6
SMARCA4-216ENST00000591545 DNLZQ5SXM8 178 aa11.29□□□□□ -0.6
SMARCA4-216ENST00000591545 FAM53AQ6NSI3 398 aaPredicted RBP11.29□□□□□ -0.6
SMARCA4-216ENST00000591545 SCN5AQ14524 2016 aa11.29□□□□□ -0.6
SMARCA4-216ENST00000591545 ZNF646O15015 1829 aaPredicted RBP11.29□□□□□ -0.6
SMARCA4-216ENST00000591545 TRAV9-1A0A075B6T8 112 aa11.29□□□□□ -0.6
SMARCA4-216ENST00000591545 hCG_38984A0A1B0GV85 526 aa11.29□□□□□ -0.6
SMARCA4-216ENST00000591545 ANOS1P23352 680 aa11.29□□□□□ -0.6
SMARCA4-216ENST00000591545 OR4C13Q8NGP0 309 aa11.29□□□□□ -0.6
SMARCA4-216ENST00000591545 TM2D1Q9BX74 207 aa11.29□□□□□ -0.6
SMARCA4-216ENST00000591545 SLC25A17O43808 307 aa11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 TFPI2P48307 235 aa11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 JOSD1Q15040 202 aaPredicted RBP11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 ZNF818PQ6ZRF7 136 aa11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 OR5P3Q8WZ94 311 aa11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 PGLYRP4Q96LB8 373 aa11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 SH3BGRL3Q9H299 93 aa11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 RAMP1O60894 148 aa11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 GCHFRP30047 84 aa11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 SSTR5P35346 364 aa11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 CDKN1AP38936 164 aa11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 PAPPA-AS1Q5QFB9 102 aa11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 PIKFYVEQ9Y2I7 2098 aa11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 ATP5G2Q06055 141 aa11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 C17orf82Q86X59 251 aaPredicted RBP11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 SDHCQ99643 169 aaPredicted RBP11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 C17orf100A8MU93 164 aa11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 TM4SF20Q53R12 229 aa11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 HIST1H4GQ99525 98 aa11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 NABP2Q9BQ15 211 aa11.28□□□□□ -0.6
SMARCA4-216ENST00000591545 RBFOX2O43251 390 aaKnown RBP eCLIP11.27□□□□□ -0.6
SMARCA4-216ENST00000591545 NUDT3O95989 172 aa11.27□□□□□ -0.6
SMARCA4-216ENST00000591545 CRYBB3P26998 211 aa11.27□□□□□ -0.6
SMARCA4-216ENST00000591545 C2orf83Q53S99 150 aa11.27□□□□□ -0.6
SMARCA4-216ENST00000591545 AUP1Q9Y679 476 aa11.27□□□□□ -0.6
SMARCA4-216ENST00000591545 LOC107984156A0A0G2JMH3 177 aa11.27□□□□□ -0.61
SMARCA4-216ENST00000591545 ARL17AQ8IVW1 177 aa11.27□□□□□ -0.61
SMARCA4-216ENST00000591545 DPM3Q9P2X0 92 aa11.27□□□□□ -0.61
SMARCA4-216ENST00000591545 A0A087WWC5 75 aa11.27□□□□□ -0.61
SMARCA4-216ENST00000591545 UQCRFS1P47985 274 aa11.27□□□□□ -0.61
SMARCA4-216ENST00000591545 EFNB1P98172 346 aa11.27□□□□□ -0.61
SMARCA4-216ENST00000591545 LEMD1Q68G75 181 aa11.27□□□□□ -0.61
SMARCA4-216ENST00000591545 THADAQ6YHU6 1953 aa11.27□□□□□ -0.61
SMARCA4-216ENST00000591545 LOC102724200A0A096LPH7 203 aaPredicted RBP11.27□□□□□ -0.61
SMARCA4-216ENST00000591545 A8MXK9 166 aa11.27□□□□□ -0.61
SMARCA4-216ENST00000591545 HBBP68871 147 aa11.27□□□□□ -0.61
SMARCA4-216ENST00000591545 SAPCD1Q5SSQ6 148 aa11.27□□□□□ -0.61
SMARCA4-216ENST00000591545 HCP5Q6MZN7 132 aa11.27□□□□□ -0.61
SMARCA4-216ENST00000591545 DRAM1Q8N682 238 aa11.27□□□□□ -0.61
SMARCA4-216ENST00000591545 IL18BPO95998 194 aa11.26□□□□□ -0.61
SMARCA4-216ENST00000591545 LGALS3P17931 250 aaKnown RBP11.26□□□□□ -0.61
SMARCA4-216ENST00000591545 CX3CL1P78423 397 aa11.26□□□□□ -0.61
SMARCA4-216ENST00000591545 TMEM136Q6ZRR5 245 aa11.26□□□□□ -0.61
SMARCA4-216ENST00000591545 SRSF12Q8WXF0 261 aaKnown RBP11.26□□□□□ -0.61
SMARCA4-216ENST00000591545 MRPS16Q9Y3D3 137 aaKnown RBP11.26□□□□□ -0.61
SMARCA4-216ENST00000591545 SOX21Q9Y651 276 aaPredicted RBP11.26□□□□□ -0.61
SMARCA4-216ENST00000591545 DSCR9P59020 149 aa11.26□□□□□ -0.61
SMARCA4-216ENST00000591545 Q5BKY6 102 aa11.26□□□□□ -0.61
SMARCA4-216ENST00000591545 ASPHD2Q6ICH7 369 aa11.26□□□□□ -0.61
SMARCA4-216ENST00000591545 CYP2G1PQ6ZSU1 146 aa11.26□□□□□ -0.61
SMARCA4-216ENST00000591545 PLSCR2Q9NRY7 297 aa11.26□□□□□ -0.61
SMARCA4-216ENST00000591545 CIRBPQ14011 172 aaKnown RBP11.26□□□□□ -0.61
SMARCA4-216ENST00000591545 HERPUD1Q15011 391 aa11.26□□□□□ -0.61
SMARCA4-216ENST00000591545 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.26□□□□□ -0.61
SMARCA4-216ENST00000591545 PHLDA3Q9Y5J5 127 aa11.26□□□□□ -0.61
SMARCA4-216ENST00000591545 CKAP5Q14008 2032 aa11.26□□□□□ -0.61
SMARCA4-216ENST00000591545 GNLYP22749 145 aa11.26□□□□□ -0.61
SMARCA4-216ENST00000591545 TIMP3P35625 211 aa11.26□□□□□ -0.61
SMARCA4-216ENST00000591545 RRN3P1Q2M238 152 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms