RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 SECTM1Q8WVN6 248 aa13.58□□□□□ -0.24
H3F3B-209ENST00000589949 CACNG8Q8WXS5 425 aa13.58□□□□□ -0.24
H3F3B-209ENST00000589949 TUBA4BQ9H853 241 aa13.58□□□□□ -0.24
H3F3B-209ENST00000589949 PALMDQ9NP74 551 aa13.58□□□□□ -0.24
H3F3B-209ENST00000589949 CCDC59Q9P031 241 aaKnown RBP13.58□□□□□ -0.24
H3F3B-209ENST00000589949 KLK9Q9UKQ9 250 aa13.58□□□□□ -0.24
H3F3B-209ENST00000589949 TRAV3A0A0B4J244 114 aa13.57□□□□□ -0.24
H3F3B-209ENST00000589949 RBMY1BA6NDE4 496 aaKnown RBP13.57□□□□□ -0.24
H3F3B-209ENST00000589949 RBMY1EA6NEQ0 496 aaKnown RBP13.57□□□□□ -0.24
H3F3B-209ENST00000589949 REG1AP05451 166 aa13.57□□□□□ -0.24
H3F3B-209ENST00000589949 CRYGCP07315 174 aa13.57□□□□□ -0.24
H3F3B-209ENST00000589949 RBMY1DP0C7P1 496 aaKnown RBP13.57□□□□□ -0.24
H3F3B-209ENST00000589949 CD81P60033 236 aa13.57□□□□□ -0.24
H3F3B-209ENST00000589949 DEFB125Q8N687 156 aa13.57□□□□□ -0.24
H3F3B-209ENST00000589949 OR2K2Q8NGT1 345 aa13.57□□□□□ -0.24
H3F3B-209ENST00000589949 KCTD12Q96CX2 325 aaKnown RBP13.57□□□□□ -0.24
H3F3B-209ENST00000589949 TSC22D3Q99576 134 aa13.57□□□□□ -0.24
H3F3B-209ENST00000589949 NEURL2Q9BR09 285 aa13.57□□□□□ -0.24
H3F3B-209ENST00000589949 HIPK2Q9H2X6 1198 aa13.57□□□□□ -0.24
H3F3B-209ENST00000589949 AUNIPQ9H7T9 357 aa13.57□□□□□ -0.24
H3F3B-209ENST00000589949 PPYP01298 95 aa13.56□□□□□ -0.24
H3F3B-209ENST00000589949 CTRB1P17538 263 aa13.56□□□□□ -0.24
H3F3B-209ENST00000589949 PSMB6P28072 239 aa13.56□□□□□ -0.24
H3F3B-209ENST00000589949 MAS1LP35410 378 aa13.56□□□□□ -0.24
H3F3B-209ENST00000589949 KIR2DS2P43631 304 aa13.56□□□□□ -0.24
H3F3B-209ENST00000589949 RORCP51449 518 aa13.56□□□□□ -0.24
H3F3B-209ENST00000589949 CTRB2Q6GPI1 263 aa13.56□□□□□ -0.24
H3F3B-209ENST00000589949 OR4A47Q6IF82 309 aa13.56□□□□□ -0.24
H3F3B-209ENST00000589949 CLEC19AQ6UXS0 136 aa13.56□□□□□ -0.24
H3F3B-209ENST00000589949 SLC25A42Q86VD7 318 aa13.56□□□□□ -0.24
H3F3B-209ENST00000589949 VSTM2AQ8TAG5 236 aa13.56□□□□□ -0.24
H3F3B-209ENST00000589949 SLC25A46Q96AG3 418 aa13.56□□□□□ -0.24
H3F3B-209ENST00000589949 WDR89Q96FK6 387 aaPredicted RBP13.56□□□□□ -0.24
H3F3B-209ENST00000589949 LYSTQ99698 3801 aa13.56□□□□□ -0.24
H3F3B-209ENST00000589949 FAM110AQ9BQ89 295 aa13.56□□□□□ -0.24
H3F3B-209ENST00000589949 SLIRPQ9GZT3 109 aaKnown RBP13.56□□□□□ -0.24
H3F3B-209ENST00000589949 ZC4H2Q9NQZ6 224 aa13.56□□□□□ -0.24
H3F3B-209ENST00000589949 ETV7Q9Y603 341 aa13.56□□□□□ -0.24
H3F3B-209ENST00000589949 LGALS9O00182 355 aa13.55□□□□□ -0.24
H3F3B-209ENST00000589949 SULT1C2O00338 296 aa13.55□□□□□ -0.24
H3F3B-209ENST00000589949 GGCTO75223 188 aaKnown RBP13.55□□□□□ -0.24
H3F3B-209ENST00000589949 HLA-GP17693 338 aa13.55□□□□□ -0.24
H3F3B-209ENST00000589949 SCAND1P57086 179 aa13.55□□□□□ -0.24
H3F3B-209ENST00000589949 ARPC4P59998 168 aa13.55□□□□□ -0.24
H3F3B-209ENST00000589949 RPL8P62917 257 aaKnown RBP13.55□□□□□ -0.24
H3F3B-209ENST00000589949 SPAG16Q8N0X2 631 aa13.55□□□□□ -0.24
H3F3B-209ENST00000589949 IGLV11-55A0A075B6I3 123 aa13.54□□□□□ -0.24
H3F3B-209ENST00000589949 TMEM213A2RRL7 107 aa13.54□□□□□ -0.24
H3F3B-209ENST00000589949 MEIS3P1A6NDR6 274 aa13.54□□□□□ -0.24
H3F3B-209ENST00000589949 MFSD2BA6NFX1 497 aa13.54□□□□□ -0.24
H3F3B-209ENST00000589949 HRASP01112 189 aa13.54□□□□□ -0.24
H3F3B-209ENST00000589949 CBLN1P23435 193 aa13.54□□□□□ -0.24
H3F3B-209ENST00000589949 OR2B8PP59922 312 aa13.54□□□□□ -0.24
H3F3B-209ENST00000589949 MSMO1Q15800 293 aa13.54□□□□□ -0.24
H3F3B-209ENST00000589949 ZNF818PQ6ZRF7 136 aa13.54□□□□□ -0.24
H3F3B-209ENST00000589949 LINC00299Q6ZSB3 139 aa13.54□□□□□ -0.24
H3F3B-209ENST00000589949 GPHB5Q86YW7 130 aa13.54□□□□□ -0.24
H3F3B-209ENST00000589949 CROCCP3Q8IVE0 287 aa13.54□□□□□ -0.24
H3F3B-209ENST00000589949 DYNLRB2Q8TF09 96 aa13.54□□□□□ -0.24
H3F3B-209ENST00000589949 SLC5A7Q9GZV3 580 aa13.54□□□□□ -0.24
H3F3B-209ENST00000589949 NXF2Q9GZY0 626 aaKnown RBP13.54□□□□□ -0.24
H3F3B-209ENST00000589949 BET1LQ9NYM9 111 aa13.54□□□□□ -0.24
H3F3B-209ENST00000589949 MLXQ9UH92 298 aa13.54□□□□□ -0.24
H3F3B-209ENST00000589949 IGLC7A0M8Q6 106 aa13.53□□□□□ -0.24
H3F3B-209ENST00000589949 ARL3P36405 182 aa13.53□□□□□ -0.24
H3F3B-209ENST00000589949 FXYD4P59646 89 aa13.53□□□□□ -0.24
H3F3B-209ENST00000589949 GUCA2BQ16661 112 aa13.53□□□□□ -0.24
H3F3B-209ENST00000589949 LAX1Q8IWV1 398 aa13.53□□□□□ -0.24
H3F3B-209ENST00000589949 MCFD2Q8NI22 146 aa13.53□□□□□ -0.24
H3F3B-209ENST00000589949 UPK2O00526 184 aa13.52□□□□□ -0.25
H3F3B-209ENST00000589949 RBFOX2O43251 390 aaKnown RBP eCLIP13.52□□□□□ -0.251e-6■■■■□ 21.1
H3F3B-209ENST00000589949 TPPPO94811 219 aa13.52□□□□□ -0.25
H3F3B-209ENST00000589949 POU2AF1Q16633 256 aa13.52□□□□□ -0.25
H3F3B-209ENST00000589949 UNQ9165/PRO28630Q6UXU0 137 aa13.52□□□□□ -0.25
H3F3B-209ENST00000589949 TMEM61Q8N0U2 210 aa13.52□□□□□ -0.25
H3F3B-209ENST00000589949 GIMAP1Q8WWP7 306 aa13.52□□□□□ -0.25
H3F3B-209ENST00000589949 AP3S1Q92572 193 aa13.52□□□□□ -0.25
H3F3B-209ENST00000589949 SRD5A3Q9H8P0 318 aa13.52□□□□□ -0.25
H3F3B-209ENST00000589949 HRASLSQ9HDD0 168 aa13.52□□□□□ -0.25
H3F3B-209ENST00000589949 A0A0A6YYH2 397 aa13.51□□□□□ -0.25
H3F3B-209ENST00000589949 A6NJ64 397 aa13.51□□□□□ -0.25
H3F3B-209ENST00000589949 OR11H12B2RN74 326 aa13.51□□□□□ -0.25
H3F3B-209ENST00000589949 S1PR2O95136 353 aa13.51□□□□□ -0.25
H3F3B-209ENST00000589949 CLEC3BP05452 202 aa13.51□□□□□ -0.25
H3F3B-209ENST00000589949 RPA2P15927 270 aa13.51□□□□□ -0.25
H3F3B-209ENST00000589949 GNRHRP30968 328 aa13.51□□□□□ -0.25
H3F3B-209ENST00000589949 TM4SF20Q53R12 229 aa13.51□□□□□ -0.25
H3F3B-209ENST00000589949 FAM209BQ5JX69 171 aa13.51□□□□□ -0.25
H3F3B-209ENST00000589949 TMEM17Q86X19 198 aa13.51□□□□□ -0.25
H3F3B-209ENST00000589949 ZBTB34Q8NCN2 500 aa13.51□□□□□ -0.25
H3F3B-209ENST00000589949 OR5AP2Q8NGF4 316 aa13.51□□□□□ -0.25
H3F3B-209ENST00000589949 OR10W1Q8NGF6 305 aa13.51□□□□□ -0.25
H3F3B-209ENST00000589949 OR51H1Q8NH63 302 aa13.51□□□□□ -0.25
H3F3B-209ENST00000589949 OR4A5Q8NH83 315 aa13.51□□□□□ -0.25
H3F3B-209ENST00000589949 DIABLOQ9NR28 239 aa13.51□□□□□ -0.25
H3F3B-209ENST00000589949 SLC2A8Q9NY64 477 aa13.51□□□□□ -0.25
H3F3B-209ENST00000589949 TECRQ9NZ01 308 aaKnown RBP13.51□□□□□ -0.25
H3F3B-209ENST00000589949 ZNF320A2RRD8 509 aa13.5□□□□□ -0.25
H3F3B-209ENST00000589949 A8MWP6 167 aa13.5□□□□□ -0.25
H3F3B-209ENST00000589949 TMEM127O75204 238 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms