RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 KIR2DL5BA0A0G2JN68 375 aa10.42□□□□□ -0.74
VMP1-209ENST00000588915 KIR2DL5BA0A0G2JPC4 375 aa10.42□□□□□ -0.74
VMP1-209ENST00000588915 CXorf65A6NEN9 183 aa10.42□□□□□ -0.74
VMP1-209ENST00000588915 RBFOX2O43251 390 aaKnown RBP eCLIP10.42□□□□□ -0.74
VMP1-209ENST00000588915 SPRY2O43597 315 aa10.42□□□□□ -0.74
VMP1-209ENST00000588915 IGHV3-23P01764 117 aa10.42□□□□□ -0.74
VMP1-209ENST00000588915 AREGP15514 252 aa10.42□□□□□ -0.74
VMP1-209ENST00000588915 HLA-GP17693 338 aa10.42□□□□□ -0.74
VMP1-209ENST00000588915 CEMP1Q6PRD7 247 aaPredicted RBP10.42□□□□□ -0.74
VMP1-209ENST00000588915 C19orf35Q6ZS72 473 aa10.42□□□□□ -0.74
VMP1-209ENST00000588915 KIR2DL5AQ8N109 375 aa10.42□□□□□ -0.74
VMP1-209ENST00000588915 KIR2DL5BQ8NHK3 375 aa10.42□□□□□ -0.74
VMP1-209ENST00000588915 ATP6V0BQ99437 205 aa10.42□□□□□ -0.74
VMP1-209ENST00000588915 SPAG8Q99932 426 aaPredicted RBP10.42□□□□□ -0.74
VMP1-209ENST00000588915 NDUFB11Q9NX14 153 aa10.42□□□□□ -0.74
VMP1-209ENST00000588915 TAS2R8Q9NYW2 309 aa10.42□□□□□ -0.74
VMP1-209ENST00000588915 KLK5Q9Y337 293 aaPredicted RBP10.42□□□□□ -0.74
VMP1-209ENST00000588915 A0A0J9YWU9 116 aa10.41□□□□□ -0.74
VMP1-209ENST00000588915 TSPAN4O14817 238 aa10.41□□□□□ -0.74
VMP1-209ENST00000588915 CYB5BO43169 146 aa10.41□□□□□ -0.74
VMP1-209ENST00000588915 PTBP1P26599 531 aaKnown RBP eCLIP10.41□□□□□ -0.74
VMP1-209ENST00000588915 AQP4P55087 323 aa10.41□□□□□ -0.74
VMP1-209ENST00000588915 OR2B8PP59922 312 aa10.41□□□□□ -0.74
VMP1-209ENST00000588915 POU2AF1Q16633 256 aa10.41□□□□□ -0.74
VMP1-209ENST00000588915 ZNF585BQ52M93 769 aa10.41□□□□□ -0.74
VMP1-209ENST00000588915 LAMTOR1Q6IAA8 161 aa10.41□□□□□ -0.74
VMP1-209ENST00000588915 PLET1Q6UQ28 207 aa10.41□□□□□ -0.74
VMP1-209ENST00000588915 UNQ9165/PRO28630Q6UXU0 137 aa10.41□□□□□ -0.74
VMP1-209ENST00000588915 SSX9Q7RTT3 188 aa10.41□□□□□ -0.74
VMP1-209ENST00000588915 LYG2Q86SG7 212 aa10.41□□□□□ -0.74
VMP1-209ENST00000588915 TMEM217Q8N7C4 229 aa10.41□□□□□ -0.74
VMP1-209ENST00000588915 ZNF502Q8TBZ5 544 aa10.41□□□□□ -0.74
VMP1-209ENST00000588915 ZNF436Q9C0F3 470 aaPredicted RBP10.41□□□□□ -0.74
VMP1-209ENST00000588915 BLOC1S6Q9UL45 172 aa10.41□□□□□ -0.74
VMP1-209ENST00000588915 S4R3C0 116 aa10.41□□□□□ -0.74
VMP1-209ENST00000588915 MFSD2BA6NFX1 497 aa10.4□□□□□ -0.74
VMP1-209ENST00000588915 CGB1A6NKQ9 187 aa10.4□□□□□ -0.74
VMP1-209ENST00000588915 NOTOA8MTQ0 251 aa10.4□□□□□ -0.74
VMP1-209ENST00000588915 TAS2R31P59538 309 aa10.4□□□□□ -0.74
VMP1-209ENST00000588915 GNG2P59768 71 aa10.4□□□□□ -0.74
VMP1-209ENST00000588915 TIMM50Q3ZCQ8 353 aa10.4□□□□□ -0.74
VMP1-209ENST00000588915 THOC7Q6I9Y2 204 aaKnown RBP10.4□□□□□ -0.74
VMP1-209ENST00000588915 HSD17B13Q7Z5P4 300 aaPredicted RBP10.4□□□□□ -0.74
VMP1-209ENST00000588915 STPG3Q8N7X2 389 aa10.4□□□□□ -0.74
VMP1-209ENST00000588915 VN1R17PQ8TDU5 208 aa10.4□□□□□ -0.74
VMP1-209ENST00000588915 KMT2AQ03164 3969 aa10.4□□□□□ -0.74
VMP1-209ENST00000588915 IGLC7A0M8Q6 106 aa10.39□□□□□ -0.75
VMP1-209ENST00000588915 TMEM235A6NFC5 223 aa10.39□□□□□ -0.75
VMP1-209ENST00000588915 TGOLN2O43493 480 aa10.39□□□□□ -0.75
VMP1-209ENST00000588915 HPRT1P00492 218 aa10.39□□□□□ -0.75
VMP1-209ENST00000588915 NQO2P16083 231 aa10.39□□□□□ -0.75
VMP1-209ENST00000588915 GPR183P32249 361 aa10.39□□□□□ -0.75
VMP1-209ENST00000588915 PMS2P11Q13670 270 aa10.39□□□□□ -0.75
VMP1-209ENST00000588915 TPRA1Q86W33 373 aa10.39□□□□□ -0.75
VMP1-209ENST00000588915 NR2C2APQ86WQ0 139 aa10.39□□□□□ -0.75
VMP1-209ENST00000588915 SPAG16Q8N0X2 631 aa10.39□□□□□ -0.75
VMP1-209ENST00000588915 CD300LFQ8TDQ1 290 aa10.39□□□□□ -0.75
VMP1-209ENST00000588915 NUDCD2Q8WVJ2 157 aa10.39□□□□□ -0.75
VMP1-209ENST00000588915 RNF183Q96D59 192 aa10.39□□□□□ -0.75
VMP1-209ENST00000588915 COMMD5Q9GZQ3 224 aa10.39□□□□□ -0.75
VMP1-209ENST00000588915 HRASLSQ9HDD0 168 aa10.39□□□□□ -0.75
VMP1-209ENST00000588915 FRAS1Q86XX4 4008 aa10.39□□□□□ -0.75
VMP1-209ENST00000588915 UPK2O00526 184 aa10.38□□□□□ -0.75
VMP1-209ENST00000588915 SSX5O60225 188 aa10.38□□□□□ -0.75
VMP1-209ENST00000588915 REG1AP05451 166 aa10.38□□□□□ -0.75
VMP1-209ENST00000588915 FGF9P31371 208 aaPredicted RBP10.38□□□□□ -0.75
VMP1-209ENST00000588915 CATR1Q13166 79 aa10.38□□□□□ -0.75
VMP1-209ENST00000588915 C22orf42Q6IC83 251 aa10.38□□□□□ -0.75
VMP1-209ENST00000588915 SPSB3Q6PJ21 355 aa10.38□□□□□ -0.75
VMP1-209ENST00000588915 NRG4Q8WWG1 115 aa10.38□□□□□ -0.75
VMP1-209ENST00000588915 TMEM190Q8WZ59 177 aa10.38□□□□□ -0.75
VMP1-209ENST00000588915 DAZ1Q9NQZ3 744 aaKnown RBP10.38□□□□□ -0.75
VMP1-209ENST00000588915 CCL28Q9NRJ3 127 aa10.38□□□□□ -0.75
VMP1-209ENST00000588915 SELENOKQ9Y6D0 94 aa10.38□□□□□ -0.75
VMP1-209ENST00000588915 OR4C46A6NHA9 309 aa10.37□□□□□ -0.75
VMP1-209ENST00000588915 K7EMT4 169 aa10.37□□□□□ -0.75
VMP1-209ENST00000588915 MRPS14O60783 128 aaKnown RBP10.37□□□□□ -0.75
VMP1-209ENST00000588915 FCGR2CP31995 323 aa10.37□□□□□ -0.75
VMP1-209ENST00000588915 SCAND1P57086 179 aa10.37□□□□□ -0.75
VMP1-209ENST00000588915 ARPC4P59998 168 aa10.37□□□□□ -0.75
VMP1-209ENST00000588915 EWSR1Q01844 656 aaKnown RBP eCLIP10.37□□□□□ -0.75
VMP1-209ENST00000588915 DEFB135Q30KP9 77 aa10.37□□□□□ -0.75
VMP1-209ENST00000588915 CADM3Q8N126 398 aa10.37□□□□□ -0.75
VMP1-209ENST00000588915 BEST4Q8NFU0 473 aa10.37□□□□□ -0.75
VMP1-209ENST00000588915 OR13F1Q8NGS4 319 aa10.37□□□□□ -0.75
VMP1-209ENST00000588915 SECTM1Q8WVN6 248 aa10.37□□□□□ -0.75
VMP1-209ENST00000588915 BORCS5Q969J3 196 aa10.37□□□□□ -0.75
VMP1-209ENST00000588915 GALNT14Q96FL9 552 aa10.37□□□□□ -0.75
VMP1-209ENST00000588915 BSCL2Q96G97 398 aaPredicted RBP10.37□□□□□ -0.75
VMP1-209ENST00000588915 QTRT1Q9BXR0 403 aaKnown RBP10.37□□□□□ -0.75
VMP1-209ENST00000588915 PLEKHA2Q9HB19 425 aa10.37□□□□□ -0.75
VMP1-209ENST00000588915 A0A0A6YYH2 397 aa10.36□□□□□ -0.75
VMP1-209ENST00000588915 A6NJ64 397 aa10.36□□□□□ -0.75
VMP1-209ENST00000588915 NDUFA4O00483 81 aa10.36□□□□□ -0.75
VMP1-209ENST00000588915 PPYP01298 95 aa10.36□□□□□ -0.75
VMP1-209ENST00000588915 HSPA13P48723 471 aa10.36□□□□□ -0.75
VMP1-209ENST00000588915 CMC4P56277 68 aaPredicted RBP10.36□□□□□ -0.75
VMP1-209ENST00000588915 LGALS9CQ6DKI2 356 aa10.36□□□□□ -0.75
VMP1-209ENST00000588915 GDPD1Q8N9F7 314 aa10.36□□□□□ -0.75
VMP1-209ENST00000588915 GPHA2Q96T91 129 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms