RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 DLX1P56177 255 aa7.12□□□□□ -1.27
SMAD4-206ENST00000588860 RPP30P78346 268 aaKnown RBP7.12□□□□□ -1.27
SMAD4-206ENST00000588860 DIAPH2-AS1Q14236 149 aa7.12□□□□□ -1.27
SMAD4-206ENST00000588860 ZNF429Q86V71 674 aa7.12□□□□□ -1.27
SMAD4-206ENST00000588860 TGIF2LXQ8IUE1 241 aa7.12□□□□□ -1.27
SMAD4-206ENST00000588860 CCDC28AQ8IWP9 274 aa7.12□□□□□ -1.27
SMAD4-206ENST00000588860 C11orf42Q8N5U0 333 aa7.12□□□□□ -1.27
SMAD4-206ENST00000588860 LY6G5BQ8NDX9 201 aa7.12□□□□□ -1.27
SMAD4-206ENST00000588860 OR5AN1Q8NGI8 311 aa7.12□□□□□ -1.27
SMAD4-206ENST00000588860 OSR1Q8TAX0 266 aaPredicted RBP7.12□□□□□ -1.27
SMAD4-206ENST00000588860 TNFRSF14Q92956 283 aa7.12□□□□□ -1.27
SMAD4-206ENST00000588860 HARBI1Q96MB7 349 aa7.12□□□□□ -1.27
SMAD4-206ENST00000588860 AIFM2Q9BRQ8 373 aa7.12□□□□□ -1.27
SMAD4-206ENST00000588860 TMEM147Q9BVK8 224 aa7.12□□□□□ -1.27
SMAD4-206ENST00000588860 SSBP3Q9BWW4 388 aaPredicted RBP7.12□□□□□ -1.27
SMAD4-206ENST00000588860 PARD6GQ9BYG4 376 aaPredicted RBP7.12□□□□□ -1.27
SMAD4-206ENST00000588860 HIPK2Q9H2X6 1198 aa7.12□□□□□ -1.27
SMAD4-206ENST00000588860 TREM1Q9NP99 234 aa7.12□□□□□ -1.27
SMAD4-206ENST00000588860 PRNDQ9UKY0 176 aa7.12□□□□□ -1.27
SMAD4-206ENST00000588860 TCF19Q9Y242 345 aa7.12□□□□□ -1.27
SMAD4-206ENST00000588860 WASHC3Q9Y3C0 194 aa7.12□□□□□ -1.27
SMAD4-206ENST00000588860 OR51B2Q9Y5P1 312 aa7.12□□□□□ -1.27
SMAD4-206ENST00000588860 SPG11Q96JI7 2443 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 LOC105371242A0A075B767 164 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 A0A1B0GV50 99 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 SRRM4A7MD48 611 aaKnown RBP7.11□□□□□ -1.27
SMAD4-206ENST00000588860 PMS2P5A8MQ11 134 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 AGPAT2O15120 278 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 NDUFS7O75251 213 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 SCAF4O95104 1147 aaKnown RBP7.11□□□□□ -1.27
SMAD4-206ENST00000588860 GOSR1O95249 250 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 TSPAN15O95858 294 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 IFNA10P01566 189 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 RNF224P0DH78 156 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 SAA1P0DJI8 122 aaPredicted RBP7.11□□□□□ -1.27
SMAD4-206ENST00000588860 MYOD1P15172 320 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 VDAC2P45880 294 aaPredicted RBP7.11□□□□□ -1.27
SMAD4-206ENST00000588860 RAB13P51153 203 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 ZNF137PP52743 207 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 AKR1C1Q04828 323 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 ATP6V1FQ16864 119 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 LRRC75BQ2VPJ9 315 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 HLA-DRB5Q30154 266 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 PDLIM3Q53GG5 364 aaPredicted RBP7.11□□□□□ -1.27
SMAD4-206ENST00000588860 TMEM177Q53S58 311 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 PDPNQ86YL7 162 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 PNKDQ8N490 385 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 OR10P1Q8NGE3 313 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 LHX4Q969G2 390 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 ST6GALNAC6Q969X2 333 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 PINX1Q96BK5 328 aaKnown RBP7.11□□□□□ -1.27
SMAD4-206ENST00000588860 FLYWCH2Q96CP2 140 aaKnown RBP7.11□□□□□ -1.27
SMAD4-206ENST00000588860 PCGF1Q9BSM1 259 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 RSG1Q9BU20 258 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 HINT2Q9BX68 163 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 WDR61Q9GZS3 305 aaKnown RBP7.11□□□□□ -1.27
SMAD4-206ENST00000588860 TMEM231Q9H6L2 316 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 TMEM14BQ9NUH8 114 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 UQCC1Q9NVA1 299 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 FAM96BQ9Y3D0 163 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 FBXO7Q9Y3I1 522 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 AMMECR1Q9Y4X0 333 aaPredicted RBP7.11□□□□□ -1.27
SMAD4-206ENST00000588860 DNHD1Q96M86 4753 aa7.11□□□□□ -1.27
SMAD4-206ENST00000588860 CELSR1Q9NYQ6 3014 aa7.1□□□□□ -1.27
SMAD4-206ENST00000588860 WNK2Q9Y3S1 2297 aa7.1□□□□□ -1.27
SMAD4-206ENST00000588860 ENSAO43768 121 aaKnown RBP7.1□□□□□ -1.27
SMAD4-206ENST00000588860 KBTBD11O94819 623 aa7.1□□□□□ -1.27
SMAD4-206ENST00000588860 FGF7P21781 194 aa7.1□□□□□ -1.27
SMAD4-206ENST00000588860 HSPE1P61604 102 aaKnown RBP7.1□□□□□ -1.27
SMAD4-206ENST00000588860 SRSF3P84103 164 aaKnown RBP7.1□□□□□ -1.27
SMAD4-206ENST00000588860 TLE4Q04727 773 aa7.1□□□□□ -1.27
SMAD4-206ENST00000588860 DPPA3Q6W0C5 159 aa7.1□□□□□ -1.27
SMAD4-206ENST00000588860 PUSL1Q8N0Z8 303 aaKnown RBP7.1□□□□□ -1.27
SMAD4-206ENST00000588860 COMMD1Q8N668 190 aa7.1□□□□□ -1.27
SMAD4-206ENST00000588860 BEND2Q8NDZ0 799 aa7.1□□□□□ -1.27
SMAD4-206ENST00000588860 OR4C13Q8NGP0 309 aa7.1□□□□□ -1.27
SMAD4-206ENST00000588860 LYPD6BQ8NI32 183 aa7.1□□□□□ -1.27
SMAD4-206ENST00000588860 TAF15Q92804 592 aaKnown RBP eCLIP7.1□□□□□ -1.27
SMAD4-206ENST00000588860 PSMG3Q9BT73 122 aaPredicted RBP7.1□□□□□ -1.27
SMAD4-206ENST00000588860 BET1LQ9NYM9 111 aa7.1□□□□□ -1.27
SMAD4-206ENST00000588860 PLXNB1O43157 2135 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 IGHV3-72A0A0B4J1Y9 119 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 TEX50A0A1B0GTY4 177 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 SMCO3A2RU48 225 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 RNASEK-C17orf49H0YIS7 233 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 BUB1B-PAK6H3BSN5 160 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 M0R1W7 72 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 RRHO14718 337 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 SCO1O75880 301 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 IGLV1-47P01700 117 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 OPN1MWP04001 364 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 IL6RP08887 468 aaPredicted RBP7.09□□□□□ -1.27
SMAD4-206ENST00000588860 OPN1MW2P0DN77 364 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 OPN1MW3P0DN78 364 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 NPY1RP25929 384 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 MC5RP33032 325 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 SNCAP37840 140 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 ELLP55199 621 aaPredicted RBP7.09□□□□□ -1.27
SMAD4-206ENST00000588860 ARF6P62330 175 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 RAB11AP62491 216 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms