RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 SCAPERQ9BY12 1400 aa4.31□□□□□ -1.72
VMP1-208ENST00000588617 TRAPPC8Q9Y2L5 1435 aa4.31□□□□□ -1.72
VMP1-208ENST00000588617 A0A1B0GU33 70 aa4.31□□□□□ -1.72
VMP1-208ENST00000588617 CRHBPP24387 322 aa4.31□□□□□ -1.72
VMP1-208ENST00000588617 DEFA1P59665 94 aa4.31□□□□□ -1.72
VMP1-208ENST00000588617 FKBP1AP62942 108 aaKnown RBP4.31□□□□□ -1.72
VMP1-208ENST00000588617 GRK1Q15835 563 aa4.31□□□□□ -1.72
VMP1-208ENST00000588617 LYPD6Q86Y78 171 aa4.31□□□□□ -1.72
VMP1-208ENST00000588617 OR8B12Q8NGG6 310 aa4.31□□□□□ -1.72
VMP1-208ENST00000588617 OR51A2Q8NGJ7 313 aa4.31□□□□□ -1.72
VMP1-208ENST00000588617 MUC7Q8TAX7 377 aa4.31□□□□□ -1.72
VMP1-208ENST00000588617 SMDT1Q9H4I9 107 aa4.31□□□□□ -1.72
VMP1-208ENST00000588617 PRTFDC1Q9NRG1 225 aa4.31□□□□□ -1.72
VMP1-208ENST00000588617 MARCOQ9UEW3 520 aaPredicted RBP4.31□□□□□ -1.72
VMP1-208ENST00000588617 PRELID1Q9Y255 219 aa4.31□□□□□ -1.72
VMP1-208ENST00000588617 CAMSAP1Q5T5Y3 1602 aa4.31□□□□□ -1.72
VMP1-208ENST00000588617 FAM135AQ9P2D6 1515 aa4.31□□□□□ -1.72
VMP1-208ENST00000588617 SPATA31E1Q6ZUB1 1445 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 EIF3AQ14152 1382 aaKnown RBP4.3□□□□□ -1.72
VMP1-208ENST00000588617 OR11H12B2RN74 326 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 FAAHO00519 579 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 PDE6DO43924 150 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 CCL3P10147 92 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 ZNF22P17026 224 aaPredicted RBP4.3□□□□□ -1.72
VMP1-208ENST00000588617 RPL19P84098 196 aaKnown RBP4.3□□□□□ -1.72
VMP1-208ENST00000588617 HTR4Q13639 388 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 CST6Q15828 149 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 GLT8D1Q68CQ7 371 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 SPATA12Q7Z6I5 190 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 OR10P1Q8NGE3 313 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 OR11H2Q8NH07 326 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 MCFD2Q8NI22 146 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 PRRT1Q99946 306 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 C14orf105Q9NVL8 296 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 GID8Q9NWU2 228 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 KLK5Q9Y337 293 aaPredicted RBP4.3□□□□□ -1.72
VMP1-208ENST00000588617 RIMBP3CA6NJZ7 1639 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 RIMBP3BA6NNM3 1639 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 IQGAP3Q86VI3 1631 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 RIMBP3Q9UFD9 1639 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 VWDEQ8N2E2 1590 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 PRDM15P57071 1507 aaPredicted RBP4.3□□□□□ -1.72
VMP1-208ENST00000588617 LMTK2Q8IWU2 1503 aa4.3□□□□□ -1.72
VMP1-208ENST00000588617 UHRF1BP1Q6BDS2 1440 aa4.29□□□□□ -1.72
VMP1-208ENST00000588617 DEPDC5O75140 1603 aa4.29□□□□□ -1.72
VMP1-208ENST00000588617 LOC102725191A0A1B0GVB3 256 aa4.29□□□□□ -1.72
VMP1-208ENST00000588617 C19orf71A6NCJ1 209 aa4.29□□□□□ -1.72
VMP1-208ENST00000588617 PLA2G10O15496 165 aa4.29□□□□□ -1.72
VMP1-208ENST00000588617 SYNGR2O43760 224 aa4.29□□□□□ -1.72
VMP1-208ENST00000588617 SOD1P00441 154 aa4.29□□□□□ -1.72
VMP1-208ENST00000588617 CD5P06127 495 aa4.29□□□□□ -1.72
VMP1-208ENST00000588617 LPAR6P43657 344 aa4.29□□□□□ -1.72
VMP1-208ENST00000588617 GABRA2P47869 451 aa4.29□□□□□ -1.72
VMP1-208ENST00000588617 KRR1Q13601 381 aaKnown RBP4.29□□□□□ -1.72
VMP1-208ENST00000588617 IAH1Q2TAA2 248 aaPredicted RBP4.29□□□□□ -1.72
VMP1-208ENST00000588617 LGALS9BQ3B8N2 356 aa4.29□□□□□ -1.72
VMP1-208ENST00000588617 KRTAP13-2Q52LG2 175 aa4.29□□□□□ -1.72
VMP1-208ENST00000588617 LGALS9CQ6DKI2 356 aa4.29□□□□□ -1.72
VMP1-208ENST00000588617 ZNF322Q6U7Q0 402 aaPredicted RBP4.29□□□□□ -1.72
VMP1-208ENST00000588617 TMED4Q7Z7H5 227 aa4.29□□□□□ -1.72
VMP1-208ENST00000588617 OR8B2Q96RD0 313 aa4.29□□□□□ -1.72
VMP1-208ENST00000588617 ARMC1Q9NVT9 282 aa4.29□□□□□ -1.72
VMP1-208ENST00000588617 OPTCQ9UBM4 332 aa4.29□□□□□ -1.72
VMP1-208ENST00000588617 ZMYM4Q5VZL5 1548 aa4.29□□□□□ -1.72
VMP1-208ENST00000588617 COL18A1P39060 1754 aa4.29□□□□□ -1.72
VMP1-208ENST00000588617 DICER1Q9UPY3 1922 aaKnown RBP4.29□□□□□ -1.72
VMP1-208ENST00000588617 MAP3K4Q9Y6R4 1608 aa4.28□□□□□ -1.72
VMP1-208ENST00000588617 ITGB4P16144 1822 aa4.28□□□□□ -1.72
VMP1-208ENST00000588617 A0A087WUU8 490 aa4.28□□□□□ -1.72
VMP1-208ENST00000588617 IGHV3-73A0A0B4J1V6 119 aa4.28□□□□□ -1.72
VMP1-208ENST00000588617 TRAV26-2A0A0B4J265 109 aa4.28□□□□□ -1.72
VMP1-208ENST00000588617 hADV38S2A0JD32 116 aa4.28□□□□□ -1.72
VMP1-208ENST00000588617 GRIFINA4D1Z8 144 aa4.28□□□□□ -1.72
VMP1-208ENST00000588617 FAM159BA6NKW6 160 aa4.28□□□□□ -1.72
VMP1-208ENST00000588617 NDUFB2O95178 105 aa4.28□□□□□ -1.72
VMP1-208ENST00000588617 CPSF4O95639 269 aaKnown RBP4.28□□□□□ -1.72
VMP1-208ENST00000588617 CRYZL1O95825 349 aa4.28□□□□□ -1.72
VMP1-208ENST00000588617 RPL27AP46776 148 aaKnown RBP4.28□□□□□ -1.72
VMP1-208ENST00000588617 RPS20P60866 119 aaKnown RBP4.28□□□□□ -1.72
VMP1-208ENST00000588617 FAM229BQ4G0N7 80 aa4.28□□□□□ -1.72
VMP1-208ENST00000588617 LCE3EQ5T5B0 92 aa4.28□□□□□ -1.72
VMP1-208ENST00000588617 SMARCD3Q6STE5 483 aa4.28□□□□□ -1.72
VMP1-208ENST00000588617 IGF2BP2-AS1Q96M15 143 aa4.28□□□□□ -1.72
VMP1-208ENST00000588617 TMEM147Q9BVK8 224 aa4.28□□□□□ -1.72
VMP1-208ENST00000588617 COMMD5Q9GZQ3 224 aa4.28□□□□□ -1.72
VMP1-208ENST00000588617 C16orf95Q9H693 158 aa4.28□□□□□ -1.72
VMP1-208ENST00000588617 BCORL1Q5H9F3 1711 aa4.28□□□□□ -1.72
VMP1-208ENST00000588617 A2MP01023 1474 aa4.28□□□□□ -1.72
VMP1-208ENST00000588617 DIP2BQ9P265 1576 aa4.27□□□□□ -1.73
VMP1-208ENST00000588617 HECW2Q9P2P5 1572 aa4.27□□□□□ -1.73
VMP1-208ENST00000588617 REREQ9P2R6 1566 aa4.27□□□□□ -1.73
VMP1-208ENST00000588617 ZNF638Q14966 1978 aaKnown RBP4.27□□□□□ -1.73
VMP1-208ENST00000588617 ZNF532Q9HCE3 1301 aa4.27□□□□□ -1.73
VMP1-208ENST00000588617 TRPM2O94759 1503 aa4.27□□□□□ -1.73
VMP1-208ENST00000588617 NLRC5Q86WI3 1866 aa4.27□□□□□ -1.73
VMP1-208ENST00000588617 A0A0J9YY10 115 aa4.27□□□□□ -1.73
VMP1-208ENST00000588617 A0A1B0GX78 115 aa4.27□□□□□ -1.73
VMP1-208ENST00000588617 TP53I11O14683 189 aa4.27□□□□□ -1.73
VMP1-208ENST00000588617 FABP1P07148 127 aa4.27□□□□□ -1.73
VMP1-208ENST00000588617 RAB13P51153 203 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms