RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 C3orf85A0A1B0GTC6 90 aa12.18□□□□□ -0.46
NCLN-203ENST00000587740 NAP1L6A6NFF2 107 aa12.18□□□□□ -0.46
NCLN-203ENST00000587740 CENPXA8MT69 81 aa12.18□□□□□ -0.46
NCLN-203ENST00000587740 ARPC1BO15143 372 aaKnown RBP12.18□□□□□ -0.46
NCLN-203ENST00000587740 KBTBD11O94819 623 aa12.18□□□□□ -0.46
NCLN-203ENST00000587740 SERPINE2P07093 398 aa12.18□□□□□ -0.46
NCLN-203ENST00000587740 IL7P13232 177 aa12.18□□□□□ -0.46
NCLN-203ENST00000587740 SLC6A1P30531 599 aa12.18□□□□□ -0.46
NCLN-203ENST00000587740 CRIP2P52943 208 aaPredicted RBP12.18□□□□□ -0.46
NCLN-203ENST00000587740 TNXAQ16473 311 aa12.18□□□□□ -0.46
NCLN-203ENST00000587740 POU2AF1Q16633 256 aa12.18□□□□□ -0.46
NCLN-203ENST00000587740 ECSCRQ19T08 205 aa12.18□□□□□ -0.46
NCLN-203ENST00000587740 OR4A5Q8NH83 315 aa12.18□□□□□ -0.46
NCLN-203ENST00000587740 GRPEL2Q8TAA5 225 aa12.18□□□□□ -0.46
NCLN-203ENST00000587740 TMEM167AQ8TBQ9 72 aa12.18□□□□□ -0.46
NCLN-203ENST00000587740 RTBDNQ9BSG5 229 aaPredicted RBP12.18□□□□□ -0.46
NCLN-203ENST00000587740 FAM103A1Q9BTL3 118 aaKnown RBP12.18□□□□□ -0.46
NCLN-203ENST00000587740 CCDC32Q9BV29 185 aa12.18□□□□□ -0.46
NCLN-203ENST00000587740 C5orf66Q9H5L9 145 aa12.18□□□□□ -0.46
NCLN-203ENST00000587740 ZNF430Q9H8G1 570 aaPredicted RBP12.18□□□□□ -0.46
NCLN-203ENST00000587740 BET1LQ9NYM9 111 aa12.18□□□□□ -0.46
NCLN-203ENST00000587740 FBXO7Q9Y3I1 522 aa12.18□□□□□ -0.46
NCLN-203ENST00000587740 TEX13DA0A0J9YY54 714 aaPredicted RBP12.17□□□□□ -0.46
NCLN-203ENST00000587740 LCE6AA0A183 80 aa12.17□□□□□ -0.46
NCLN-203ENST00000587740 LINC00854A0A1B0GVQ3 168 aa12.17□□□□□ -0.46
NCLN-203ENST00000587740 G3V318 75 aa12.17□□□□□ -0.46
NCLN-203ENST00000587740 H0Y980 276 aa12.17□□□□□ -0.46
NCLN-203ENST00000587740 CCL24O00175 119 aa12.17□□□□□ -0.46
NCLN-203ENST00000587740 EGR2P11161 476 aaPredicted RBP12.17□□□□□ -0.46
NCLN-203ENST00000587740 RAB25P57735 213 aa12.17□□□□□ -0.46
NCLN-203ENST00000587740 ZNF846Q147U1 533 aa12.17□□□□□ -0.46
NCLN-203ENST00000587740 MRGPRG-AS1Q2M3A8 158 aa12.17□□□□□ -0.46
NCLN-203ENST00000587740 AKIRIN2Q53H80 203 aa12.17□□□□□ -0.46
NCLN-203ENST00000587740 OR4A47Q6IF82 309 aa12.17□□□□□ -0.46
NCLN-203ENST00000587740 UNQ5815/PRO19632Q6UWF5 114 aa12.17□□□□□ -0.46
NCLN-203ENST00000587740 ZNF695Q8IW36 515 aa12.17□□□□□ -0.46
NCLN-203ENST00000587740 LFNGQ8NES3 379 aa12.17□□□□□ -0.46
NCLN-203ENST00000587740 PHB2Q99623 299 aa12.17□□□□□ -0.46
NCLN-203ENST00000587740 SLC25A21Q9BQT8 299 aaPredicted RBP12.17□□□□□ -0.46
NCLN-203ENST00000587740 C7orf50Q9BRJ6 194 aaKnown RBP12.17□□□□□ -0.46
NCLN-203ENST00000587740 WDR12Q9GZL7 423 aaKnown RBP12.17□□□□□ -0.46
NCLN-203ENST00000587740 TMEM140Q9NV12 185 aa12.17□□□□□ -0.46
NCLN-203ENST00000587740 NUBP2Q9Y5Y2 271 aa12.17□□□□□ -0.46
NCLN-203ENST00000587740 A0A1W2PN81 502 aa12.16□□□□□ -0.46
NCLN-203ENST00000587740 MARCH11A6NNE9 402 aa12.16□□□□□ -0.46
NCLN-203ENST00000587740 B3GALNT1O75752 331 aa12.16□□□□□ -0.46
NCLN-203ENST00000587740 KRASP01116 189 aa12.16□□□□□ -0.46
NCLN-203ENST00000587740 IGHG4P01861 327 aa12.16□□□□□ -0.46
NCLN-203ENST00000587740 ELANEP08246 267 aa12.16□□□□□ -0.46
NCLN-203ENST00000587740 RPA2P15927 270 aa12.16□□□□□ -0.46
NCLN-203ENST00000587740 CD40LGP29965 261 aa12.16□□□□□ -0.46
NCLN-203ENST00000587740 PPIFP30405 207 aaKnown RBP12.16□□□□□ -0.46
NCLN-203ENST00000587740 MAS1LP35410 378 aa12.16□□□□□ -0.46
NCLN-203ENST00000587740 G6PCP35575 357 aa12.16□□□□□ -0.46
NCLN-203ENST00000587740 CHRNA7P36544 502 aa12.16□□□□□ -0.46
NCLN-203ENST00000587740 SSBP2P81877 361 aaPredicted RBP12.16□□□□□ -0.46
NCLN-203ENST00000587740 CFHR3Q02985 330 aa12.16□□□□□ -0.46
NCLN-203ENST00000587740 FOXE3Q13461 319 aa12.16□□□□□ -0.46
NCLN-203ENST00000587740 DEFB136Q30KP8 78 aa12.16□□□□□ -0.46
NCLN-203ENST00000587740 CXorf66Q5JRM2 361 aaPredicted RBP12.16□□□□□ -0.46
NCLN-203ENST00000587740 TP53RKQ96S44 253 aa12.16□□□□□ -0.46
NCLN-203ENST00000587740 NAA60Q9H7X0 242 aa12.16□□□□□ -0.46
NCLN-203ENST00000587740 VSIG4Q9Y279 399 aa12.16□□□□□ -0.46
NCLN-203ENST00000587740 STARD9Q9P2P6 4700 aa12.16□□□□□ -0.46
NCLN-203ENST00000587740 UPK2O00526 184 aa12.15□□□□□ -0.46
NCLN-203ENST00000587740 RPL8P62917 257 aaKnown RBP12.15□□□□□ -0.46
NCLN-203ENST00000587740 SBSPONQ8IVN8 264 aa12.15□□□□□ -0.46
NCLN-203ENST00000587740 SGPP2Q8IWX5 399 aa12.15□□□□□ -0.46
NCLN-203ENST00000587740 MINDY2Q8NBR6 621 aa12.15□□□□□ -0.46
NCLN-203ENST00000587740 SRSF12Q8WXF0 261 aaKnown RBP12.15□□□□□ -0.46
NCLN-203ENST00000587740 TMEM68Q96MH6 324 aa12.15□□□□□ -0.46
NCLN-203ENST00000587740 RCHY1Q96PM5 261 aa12.15□□□□□ -0.46
NCLN-203ENST00000587740 FOXA2Q9Y261 457 aaPredicted RBP12.15□□□□□ -0.46
NCLN-203ENST00000587740 KCNIP3Q9Y2W7 256 aa12.15□□□□□ -0.46
NCLN-203ENST00000587740 MSGN1A6NI15 193 aa12.14□□□□□ -0.47
NCLN-203ENST00000587740 CRYM-AS1A6NIL9 109 aa12.14□□□□□ -0.47
NCLN-203ENST00000587740 ATG12O94817 140 aa12.14□□□□□ -0.47
NCLN-203ENST00000587740 RPLP1P05386 114 aaKnown RBP12.14□□□□□ -0.47
NCLN-203ENST00000587740 IL6RP08887 468 aaPredicted RBP12.14□□□□□ -0.47
NCLN-203ENST00000587740 AKR1C4P17516 323 aa12.14□□□□□ -0.47
NCLN-203ENST00000587740 HLA-GP17693 338 aa12.14□□□□□ -0.47
NCLN-203ENST00000587740 RPL27AP46776 148 aaKnown RBP12.14□□□□□ -0.47
NCLN-203ENST00000587740 RBMS2Q15434 407 aaKnown RBP12.14□□□□□ -0.47
NCLN-203ENST00000587740 TRIM16LQ309B1 348 aa12.14□□□□□ -0.47
NCLN-203ENST00000587740 SP6Q3SY56 376 aa12.14□□□□□ -0.47
NCLN-203ENST00000587740 C19orf54Q5BKX5 351 aa12.14□□□□□ -0.47
NCLN-203ENST00000587740 C9orf66Q5T8R8 295 aa12.14□□□□□ -0.47
NCLN-203ENST00000587740 TMEM65Q6PI78 240 aa12.14□□□□□ -0.47
NCLN-203ENST00000587740 LCNL1Q6ZST4 164 aa12.14□□□□□ -0.47
NCLN-203ENST00000587740 CADM3Q8N126 398 aa12.14□□□□□ -0.47
NCLN-203ENST00000587740 ADAD2Q8NCV1 583 aaKnown RBP12.14□□□□□ -0.47
NCLN-203ENST00000587740 SPIN2AQ99865 258 aa12.14□□□□□ -0.47
NCLN-203ENST00000587740 SPIN2BQ9BPZ2 258 aa12.14□□□□□ -0.47
NCLN-203ENST00000587740 TRAV3A0A0B4J244 114 aa12.13□□□□□ -0.47
NCLN-203ENST00000587740 SNAPC5O75971 98 aa12.13□□□□□ -0.47
NCLN-203ENST00000587740 IGKV1-39P01597 117 aa12.13□□□□□ -0.47
NCLN-203ENST00000587740 IGLV1-40P01703 118 aa12.13□□□□□ -0.47
NCLN-203ENST00000587740 IGKV1D-39P04432 117 aa12.13□□□□□ -0.47
NCLN-203ENST00000587740 OR5AC1P0C628 307 aa12.13□□□□□ -0.47
NCLN-203ENST00000587740 UCP1P25874 307 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms