RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ZNF773Q6PK81 442 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 RBPMS2Q6ZRY4 209 aaKnown RBP8.76□□□□□ -1.01
BRCA1-225ENST00000586385 KIR2DL5AQ8N109 375 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 MFSD4AQ8N468 514 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 KIR2DL5BQ8NHK3 375 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 VSTM2AQ8TAG5 236 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 TCTEX1D2Q8WW35 142 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 TMEM190Q8WZ59 177 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 HSD17B10Q99714 261 aaKnown RBP8.76□□□□□ -1.01
BRCA1-225ENST00000586385 SPAG8Q99932 426 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-225ENST00000586385 SPATA2Q9UM82 520 aa8.76□□□□□ -1.01
BRCA1-225ENST00000586385 MRPS7Q9Y2R9 242 aaKnown RBP8.76□□□□□ -1.01
BRCA1-225ENST00000586385 TRAV1-2A0A0B4J238 106 aa8.75□□□□□ -1.01
BRCA1-225ENST00000586385 HLA-GP17693 338 aa8.75□□□□□ -1.01
BRCA1-225ENST00000586385 RPL35AP18077 110 aaKnown RBP8.75□□□□□ -1.01
BRCA1-225ENST00000586385 CRHBPP24387 322 aa8.75□□□□□ -1.01
BRCA1-225ENST00000586385 TALDO1P37837 337 aa8.75□□□□□ -1.01
BRCA1-225ENST00000586385 PSMD7P51665 324 aa8.75□□□□□ -1.01
BRCA1-225ENST00000586385 ELLP55199 621 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-225ENST00000586385 ZNF124Q15973 351 aa8.75□□□□□ -1.01
BRCA1-225ENST00000586385 TIMM50Q3ZCQ8 353 aa8.75□□□□□ -1.01
BRCA1-225ENST00000586385 CDNFQ49AH0 187 aa8.75□□□□□ -1.01
BRCA1-225ENST00000586385 NUDCD2Q8WVJ2 157 aa8.75□□□□□ -1.01
BRCA1-225ENST00000586385 MGLLQ99685 303 aa8.75□□□□□ -1.01
BRCA1-225ENST00000586385 MAP6D1Q9H9H5 199 aa8.75□□□□□ -1.01
BRCA1-225ENST00000586385 ACOT13Q9NPJ3 140 aa8.75□□□□□ -1.01
BRCA1-225ENST00000586385 TAS2R8Q9NYW2 309 aa8.75□□□□□ -1.01
BRCA1-225ENST00000586385 UFC1Q9Y3C8 167 aa8.75□□□□□ -1.01
BRCA1-225ENST00000586385 IGHV3OR16-8A0A075B7F1 116 aa8.74□□□□□ -1.01
BRCA1-225ENST00000586385 F8W735 103 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-225ENST00000586385 SLC22A5O76082 557 aa8.74□□□□□ -1.01
BRCA1-225ENST00000586385 RPA2P15927 270 aa8.74□□□□□ -1.01
BRCA1-225ENST00000586385 PTBP1P26599 531 aaKnown RBP eCLIP8.74□□□□□ -1.011e-7■■■■■ 45.2
BRCA1-225ENST00000586385 MFAP2P55001 183 aa8.74□□□□□ -1.01
BRCA1-225ENST00000586385 HACD4Q5VWC8 232 aa8.74□□□□□ -1.01
BRCA1-225ENST00000586385 CXorf58Q96LI9 332 aa8.74□□□□□ -1.01
BRCA1-225ENST00000586385 SCN3BQ9NY72 215 aa8.74□□□□□ -1.01
BRCA1-225ENST00000586385 BET1LQ9NYM9 111 aa8.74□□□□□ -1.01
BRCA1-225ENST00000586385 DNAH6Q9C0G6 4158 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 SMIM30A4D0T7 59 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 TMEM235A6NFC5 223 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 TGOLN2O43493 480 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 TNFSF12O43508 249 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 RGS10O43665 173 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 DHFRP00374 187 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 CTXN2P0C2S0 81 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 PTHLHP12272 177 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 DEFA4P12838 97 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 ADMP35318 185 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 NANOS2P60321 138 aaKnown RBP8.73□□□□□ -1.01
BRCA1-225ENST00000586385 CNIH2Q6PI25 160 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 PLET1Q6UQ28 207 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 ZNF66Q6ZN08 573 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 SLC38A6Q8IZM9 456 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 STPG3Q8N7X2 389 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 OR10W1Q8NGF6 305 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 CHRDL1Q9BU40 450 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 CENPOQ9BU64 300 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 ATG5Q9H1Y0 275 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 DCSTAMPQ9H295 470 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 CCL28Q9NRJ3 127 aa8.73□□□□□ -1.01
BRCA1-225ENST00000586385 METTL21EPA6NDL7 271 aa8.72□□□□□ -1.01
BRCA1-225ENST00000586385 OR2T8A6NH00 312 aa8.72□□□□□ -1.01
BRCA1-225ENST00000586385 UPK2O00526 184 aa8.72□□□□□ -1.01
BRCA1-225ENST00000586385 HRASP01112 189 aa8.72□□□□□ -1.01
BRCA1-225ENST00000586385 AQP4P55087 323 aa8.72□□□□□ -1.01
BRCA1-225ENST00000586385 WT1-ASQ06250 92 aa8.72□□□□□ -1.01
BRCA1-225ENST00000586385 POU2AF1Q16633 256 aa8.72□□□□□ -1.01
BRCA1-225ENST00000586385 PRSS48Q7RTY5 328 aa8.72□□□□□ -1.01
BRCA1-225ENST00000586385 APRG1Q8IVJ8 170 aa8.72□□□□□ -1.01
BRCA1-225ENST00000586385 OR5B3Q8NH48 314 aa8.72□□□□□ -1.01
BRCA1-225ENST00000586385 OR4A5Q8NH83 315 aa8.72□□□□□ -1.01
BRCA1-225ENST00000586385 GATAD1Q8WUU5 269 aa8.72□□□□□ -1.01
BRCA1-225ENST00000586385 NRG4Q8WWG1 115 aa8.72□□□□□ -1.01
BRCA1-225ENST00000586385 GALNT14Q96FL9 552 aa8.72□□□□□ -1.01
BRCA1-225ENST00000586385 DAZ1Q9NQZ3 744 aaKnown RBP8.72□□□□□ -1.01
BRCA1-225ENST00000586385 ANXA10Q9UJ72 324 aa8.72□□□□□ -1.01
BRCA1-225ENST00000586385 TPRKBQ9Y3C4 175 aa8.72□□□□□ -1.01
BRCA1-225ENST00000586385 IGHV3-21A0A0B4J1V1 117 aa8.71□□□□□ -1.02
BRCA1-225ENST00000586385 EBAG9O00559 213 aa8.71□□□□□ -1.02
BRCA1-225ENST00000586385 PDCD5O14737 125 aa8.71□□□□□ -1.02
BRCA1-225ENST00000586385 RBFOX2O43251 390 aaKnown RBP eCLIP8.71□□□□□ -1.02
BRCA1-225ENST00000586385 ZNF207O43670 478 aaKnown RBP8.71□□□□□ -1.02
BRCA1-225ENST00000586385 CTSDP07339 412 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-225ENST00000586385 RAB3BP20337 219 aa8.71□□□□□ -1.02
BRCA1-225ENST00000586385 RANBP1P43487 201 aa8.71□□□□□ -1.02
BRCA1-225ENST00000586385 SPAG16Q8N0X2 631 aa8.71□□□□□ -1.02
BRCA1-225ENST00000586385 TMEM217Q8N7C4 229 aa8.71□□□□□ -1.02
BRCA1-225ENST00000586385 VN1R17PQ8TDU5 208 aa8.71□□□□□ -1.02
BRCA1-225ENST00000586385 CCDC90BQ9GZT6 254 aa8.71□□□□□ -1.02
BRCA1-225ENST00000586385 HRASLSQ9HDD0 168 aa8.71□□□□□ -1.02
BRCA1-225ENST00000586385 NDUFB11Q9NX14 153 aa8.71□□□□□ -1.02
BRCA1-225ENST00000586385 TRDV1A0A1B0GX56 115 aa8.7□□□□□ -1.02
BRCA1-225ENST00000586385 K7EIM0 57 aa8.7□□□□□ -1.02
BRCA1-225ENST00000586385 SULT1C2O00338 296 aa8.7□□□□□ -1.02
BRCA1-225ENST00000586385 ARL6IP1Q15041 203 aa8.7□□□□□ -1.02
BRCA1-225ENST00000586385 MSMO1Q15800 293 aa8.7□□□□□ -1.02
BRCA1-225ENST00000586385 TBCEQ15813 527 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-225ENST00000586385 GDPD1Q8N9F7 314 aa8.7□□□□□ -1.02
BRCA1-225ENST00000586385 CD300LFQ8TDQ1 290 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms