RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 SHOXO15266 292 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 FOXH1O75593 365 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 CST7O76096 145 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 NXPH3O95157 252 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 OR8U8P0C7N1 319 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 FAM157CP0CG43 387 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 SPP1P10451 314 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 IAPPP10997 89 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 CEACAM3P40198 252 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 DYNLT3P51808 116 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 SPANXN5Q5MJ07 72 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 OR4A47Q6IF82 309 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 COMMD7Q86VX2 200 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 EIF4E3Q8N5X7 224 aaKnown RBP8.43□□□□□ -1.06
LIG3-203ENST00000585370 SCGB1C1Q8TD33 95 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 TMED6Q8WW62 240 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 QTRT1Q9BXR0 403 aaKnown RBP8.43□□□□□ -1.06
LIG3-203ENST00000585370 REG4Q9BYZ8 158 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 ENY2Q9NPA8 101 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 TMEM14BQ9NUH8 114 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 ONECUT1Q9UBC0 465 aa8.43□□□□□ -1.06
LIG3-203ENST00000585370 CR1P17927 2039 aa8.42□□□□□ -1.06
LIG3-203ENST00000585370 C15orf61A6NNL5 157 aa8.42□□□□□ -1.06
LIG3-203ENST00000585370 OOSP1A8MZH6 123 aa8.42□□□□□ -1.06
LIG3-203ENST00000585370 NDUFS7O75251 213 aa8.42□□□□□ -1.06
LIG3-203ENST00000585370 KBTBD11O94819 623 aa8.42□□□□□ -1.06
LIG3-203ENST00000585370 USF1P22415 310 aaPredicted RBP8.42□□□□□ -1.06
LIG3-203ENST00000585370 RPS16P62249 146 aaKnown RBP8.42□□□□□ -1.06
LIG3-203ENST00000585370 VMA21Q3ZAQ7 101 aa8.42□□□□□ -1.06
LIG3-203ENST00000585370 SSX9Q7RTT3 188 aa8.42□□□□□ -1.06
LIG3-203ENST00000585370 HSD17B13Q7Z5P4 300 aaPredicted RBP8.42□□□□□ -1.06
LIG3-203ENST00000585370 OR10P1Q8NGE3 313 aa8.42□□□□□ -1.06
LIG3-203ENST00000585370 OR5B3Q8NH48 314 aa8.42□□□□□ -1.06
LIG3-203ENST00000585370 SPATA3Q8NHX4 192 aa8.42□□□□□ -1.06
LIG3-203ENST00000585370 BSCL2Q96G97 398 aaPredicted RBP8.42□□□□□ -1.06
LIG3-203ENST00000585370 PIMREGQ9BSJ6 248 aa8.42□□□□□ -1.06
LIG3-203ENST00000585370 GGACTQ9BVM4 153 aa8.42□□□□□ -1.06
LIG3-203ENST00000585370 POLR3KQ9Y2Y1 108 aaPredicted RBP8.42□□□□□ -1.06
LIG3-203ENST00000585370 INSIG2Q9Y5U4 225 aa8.42□□□□□ -1.06
LIG3-203ENST00000585370 MALRD1Q5VYJ5 2156 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 DOCK11Q5JSL3 2073 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 RAB19A4D1S5 217 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 LY6LH3BQJ8 138 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 FBXO24O75426 580 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 IGHV4-39P01824 125 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 HTR1DP28221 377 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 VDAC2P45880 294 aaPredicted RBP8.41□□□□□ -1.06
LIG3-203ENST00000585370 LMO4P61968 165 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 ARF6P62330 175 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 RAB11AP62491 216 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 CLINT1Q14677 625 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 FAM74A1Q5RGS3 127 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 SLC25A24Q6NUK1 477 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 DPPA3Q6W0C5 159 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 LILRB2Q8N423 598 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 PNKDQ8N490 385 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 COMMD1Q8N668 190 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 TMEM217Q8N7C4 229 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 Q8N7P7 452 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 TEX45Q8NA69 505 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 TMEM167AQ8TBQ9 72 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 FAM168AQ92567 244 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 MARC2Q969Z3 335 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 RPEQ96AT9 228 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 HARBI1Q96MB7 349 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 CITED4Q96RK1 184 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 MS4A7Q9GZW8 240 aaPredicted RBP8.41□□□□□ -1.06
LIG3-203ENST00000585370 HEYLQ9NQ87 328 aaPredicted RBP8.41□□□□□ -1.06
LIG3-203ENST00000585370 PARP11Q9NR21 331 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 DPM3Q9P2X0 92 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 TCF19Q9Y242 345 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 OR51B2Q9Y5P1 312 aa8.41□□□□□ -1.06
LIG3-203ENST00000585370 IGHV2-70DA0A0C4DH43 119 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 MFSD2BA6NFX1 497 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 ZNF705EA8MWA4 302 aaPredicted RBP8.4□□□□□ -1.06
LIG3-203ENST00000585370 INS-IGF2F8WCM5 200 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 TEX46H3BTG2 121 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 SOX15O60248 233 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 IGKV1-16P04430 117 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 ARG1P05089 322 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 METTL15P1P0C7V9 234 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 MAS1LP35410 378 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 SERF2P84101 59 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 SLC38A11Q08AI6 406 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 TMEM267Q0VDI3 215 aaPredicted RBP8.4□□□□□ -1.06
LIG3-203ENST00000585370 LRRC75BQ2VPJ9 315 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 MINOS1Q5TGZ0 78 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 CCDC144NLQ6NUI1 221 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 CLEC2AQ6UVW9 174 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 UQCC3Q6UW78 93 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 IL34Q6ZMJ4 242 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 MRPL41Q8IXM3 137 aaKnown RBP8.4□□□□□ -1.06
LIG3-203ENST00000585370 VKORC1L1Q8N0U8 176 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 ZNF525Q8N782 197 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 OR4P4Q8NGL7 312 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 OR1L8Q8NGR8 309 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 OR2G3Q8NGZ4 309 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 CLDND2Q8NHS1 167 aa8.4□□□□□ -1.06
LIG3-203ENST00000585370 PSMG3Q9BT73 122 aaPredicted RBP8.4□□□□□ -1.06
LIG3-203ENST00000585370 TMEM147Q9BVK8 224 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms