RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 SORL1Q92673 2214 aa12.09□□□□□ -0.47
SKA2-209ENST00000583976 MPPED1O15442 326 aa12.09□□□□□ -0.47
SKA2-209ENST00000583976 RBFOX2O43251 390 aaKnown RBP eCLIP12.09□□□□□ -0.47
SKA2-209ENST00000583976 SOX15O60248 233 aa12.09□□□□□ -0.47
SKA2-209ENST00000583976 S1PR2O95136 353 aa12.09□□□□□ -0.47
SKA2-209ENST00000583976 HPRT1P00492 218 aa12.09□□□□□ -0.47
SKA2-209ENST00000583976 CTSDP07339 412 aaPredicted RBP12.09□□□□□ -0.47
SKA2-209ENST00000583976 ZNF585BQ52M93 769 aa12.09□□□□□ -0.47
SKA2-209ENST00000583976 SBSPONQ8IVN8 264 aa12.09□□□□□ -0.47
SKA2-209ENST00000583976 TEX45Q8NA69 505 aa12.09□□□□□ -0.47
SKA2-209ENST00000583976 CD300LFQ8TDQ1 290 aa12.09□□□□□ -0.47
SKA2-209ENST00000583976 DCUN1D4Q92564 292 aa12.09□□□□□ -0.47
SKA2-209ENST00000583976 UBE2E2Q96LR5 201 aa12.09□□□□□ -0.47
SKA2-209ENST00000583976 RCHY1Q96PM5 261 aa12.09□□□□□ -0.47
SKA2-209ENST00000583976 RTBDNQ9BSG5 229 aaPredicted RBP12.09□□□□□ -0.47
SKA2-209ENST00000583976 FAM103A1Q9BTL3 118 aaKnown RBP12.09□□□□□ -0.47
SKA2-209ENST00000583976 GPR132Q9UNW8 380 aa12.09□□□□□ -0.47
SKA2-209ENST00000583976 VSIG4Q9Y279 399 aa12.09□□□□□ -0.47
SKA2-209ENST00000583976 SMAD5-AS1Q9Y6J3 95 aa12.09□□□□□ -0.47
SKA2-209ENST00000583976 CSMD3Q7Z407 3707 aa12.08□□□□□ -0.48
SKA2-209ENST00000583976 TRAV41A0A0B4J266 112 aa12.08□□□□□ -0.48
SKA2-209ENST00000583976 C3orf84H3BNL1 204 aa12.08□□□□□ -0.48
SKA2-209ENST00000583976 CNIH1O95406 144 aa12.08□□□□□ -0.48
SKA2-209ENST00000583976 HRASP01112 189 aa12.08□□□□□ -0.48
SKA2-209ENST00000583976 IGLV1-40P01703 118 aa12.08□□□□□ -0.48
SKA2-209ENST00000583976 RND3P61587 244 aa12.08□□□□□ -0.48
SKA2-209ENST00000583976 ZNF846Q147U1 533 aa12.08□□□□□ -0.48
SKA2-209ENST00000583976 FXYD3Q14802 87 aa12.08□□□□□ -0.48
SKA2-209ENST00000583976 SURF2Q15527 256 aaPredicted RBP12.08□□□□□ -0.48
SKA2-209ENST00000583976 ZNF562Q6V9R5 426 aa12.08□□□□□ -0.48
SKA2-209ENST00000583976 HAPLN4Q86UW8 402 aa12.08□□□□□ -0.48
SKA2-209ENST00000583976 CCDC71LQ8N9Z2 235 aa12.08□□□□□ -0.48
SKA2-209ENST00000583976 MUC7Q8TAX7 377 aa12.08□□□□□ -0.48
SKA2-209ENST00000583976 RHOVQ96L33 236 aa12.08□□□□□ -0.48
SKA2-209ENST00000583976 C5orf66Q9H5L9 145 aa12.08□□□□□ -0.48
SKA2-209ENST00000583976 PLEKHA2Q9HB19 425 aa12.08□□□□□ -0.48
SKA2-209ENST00000583976 HYDINQ4G0P3 5121 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 IGHV4OR15-8A0A075B7B6 117 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 A0A087WW49 117 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 TEX13DA0A0J9YY54 714 aaPredicted RBP12.07□□□□□ -0.48
SKA2-209ENST00000583976 C3orf85A0A1B0GTC6 90 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 ARPC1BO15143 372 aaKnown RBP12.07□□□□□ -0.48
SKA2-209ENST00000583976 SAP30O75446 220 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 OR2A4O95047 310 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 NQO2P16083 231 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 SPNP16150 400 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 CCR6P51684 374 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 TAS2R31P59538 309 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 RUNX1Q01196 453 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 TNXAQ16473 311 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 MRGPRG-AS1Q2M3A8 158 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 SP6Q3SY56 376 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 C19orf54Q5BKX5 351 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 CASC10Q5T4H9 136 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 TMEM65Q6PI78 240 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 ADAD2Q8NCV1 583 aaKnown RBP12.07□□□□□ -0.48
SKA2-209ENST00000583976 DMBX1Q8NFW5 382 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 GRPEL2Q8TAA5 225 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 DEDD2Q8WXF8 326 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 ARPC1AQ92747 370 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 DLX4Q92988 240 aaPredicted RBP12.07□□□□□ -0.48
SKA2-209ENST00000583976 OR2A7Q96R45 310 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 TP53RKQ96S44 253 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 CCDC32Q9BV29 185 aa12.07□□□□□ -0.48
SKA2-209ENST00000583976 WDR12Q9GZL7 423 aaKnown RBP12.07□□□□□ -0.48
SKA2-209ENST00000583976 ZNF430Q9H8G1 570 aaPredicted RBP12.07□□□□□ -0.48
SKA2-209ENST00000583976 A0A1W2PN81 502 aa12.06□□□□□ -0.48
SKA2-209ENST00000583976 CENPXA8MT69 81 aa12.06□□□□□ -0.48
SKA2-209ENST00000583976 OVOL1O14753 267 aa12.06□□□□□ -0.48
SKA2-209ENST00000583976 KRASP01116 189 aa12.06□□□□□ -0.48
SKA2-209ENST00000583976 SERPINE2P07093 398 aa12.06□□□□□ -0.48
SKA2-209ENST00000583976 FRMD6-AS1P0C7T7 363 aa12.06□□□□□ -0.48
SKA2-209ENST00000583976 AKR1C4P17516 323 aa12.06□□□□□ -0.48
SKA2-209ENST00000583976 G6PCP35575 357 aa12.06□□□□□ -0.48
SKA2-209ENST00000583976 CHRNA7P36544 502 aa12.06□□□□□ -0.48
SKA2-209ENST00000583976 RAB9AP51151 201 aa12.06□□□□□ -0.48
SKA2-209ENST00000583976 PRSS8Q16651 343 aa12.06□□□□□ -0.48
SKA2-209ENST00000583976 OR4A47Q6IF82 309 aa12.06□□□□□ -0.48
SKA2-209ENST00000583976 PUSL1Q8N0Z8 303 aaKnown RBP12.06□□□□□ -0.48
SKA2-209ENST00000583976 TCTEX1D1Q8N7M0 179 aa12.06□□□□□ -0.48
SKA2-209ENST00000583976 VSTM2AQ8TAG5 236 aa12.06□□□□□ -0.48
SKA2-209ENST00000583976 SCGB3A2Q96PL1 93 aa12.06□□□□□ -0.48
SKA2-209ENST00000583976 AIFM2Q9BRQ8 373 aa12.06□□□□□ -0.48
SKA2-209ENST00000583976 NAP1L6A6NFF2 107 aa12.05□□□□□ -0.48
SKA2-209ENST00000583976 H0Y980 276 aa12.05□□□□□ -0.48
SKA2-209ENST00000583976 PLA2G10O15496 165 aa12.05□□□□□ -0.48
SKA2-209ENST00000583976 ACTL6BO94805 426 aa12.05□□□□□ -0.48
SKA2-209ENST00000583976 KBTBD11O94819 623 aa12.05□□□□□ -0.48
SKA2-209ENST00000583976 EGR2P11161 476 aaPredicted RBP12.05□□□□□ -0.48
SKA2-209ENST00000583976 CD40LGP29965 261 aa12.05□□□□□ -0.48
SKA2-209ENST00000583976 ERVK-16P61578 105 aa12.05□□□□□ -0.48
SKA2-209ENST00000583976 SSBP2P81877 361 aaPredicted RBP12.05□□□□□ -0.48
SKA2-209ENST00000583976 TMED4Q7Z7H5 227 aa12.05□□□□□ -0.48
SKA2-209ENST00000583976 MINDY2Q8NBR6 621 aa12.05□□□□□ -0.48
SKA2-209ENST00000583976 LFNGQ8NES3 379 aa12.05□□□□□ -0.48
SKA2-209ENST00000583976 TMEM167AQ8TBQ9 72 aa12.05□□□□□ -0.48
SKA2-209ENST00000583976 NAA60Q9H7X0 242 aa12.05□□□□□ -0.48
SKA2-209ENST00000583976 TMEM140Q9NV12 185 aa12.05□□□□□ -0.48
SKA2-209ENST00000583976 COMMD9Q9P000 198 aa12.05□□□□□ -0.48
SKA2-209ENST00000583976 TRAV3A0A0B4J244 114 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms