RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 Q8N9W7 124 aa15.96■□□□□ 0.14
SRSF1-206ENST00000583741 ADTRPQ96IZ2 230 aa15.96■□□□□ 0.14
SRSF1-206ENST00000583741 A0A0B4J2A0 478 aa15.95■□□□□ 0.14
SRSF1-206ENST00000583741 UCP1P25874 307 aa15.95■□□□□ 0.14
SRSF1-206ENST00000583741 LINC00205P59089 165 aa15.95■□□□□ 0.14
SRSF1-206ENST00000583741 SRPXP78539 464 aa15.95■□□□□ 0.14
SRSF1-206ENST00000583741 CFHR3Q02985 330 aa15.95■□□□□ 0.14
SRSF1-206ENST00000583741 FHL3Q13643 280 aa15.95■□□□□ 0.14
SRSF1-206ENST00000583741 TCTEX1D1Q8N7M0 179 aa15.95■□□□□ 0.14
SRSF1-206ENST00000583741 RBMXL1Q96E39 390 aaKnown RBP15.95■□□□□ 0.14
SRSF1-206ENST00000583741 SHPKQ9UHJ6 478 aa15.95■□□□□ 0.14
SRSF1-206ENST00000583741 LYSTQ99698 3801 aa15.95■□□□□ 0.14
SRSF1-206ENST00000583741 HMX3A6NHT5 357 aa15.94■□□□□ 0.14
SRSF1-206ENST00000583741 SERPINE2P07093 398 aa15.94■□□□□ 0.14
SRSF1-206ENST00000583741 ELANEP08246 267 aa15.94■□□□□ 0.14
SRSF1-206ENST00000583741 FCN2Q15485 313 aa15.94■□□□□ 0.14
SRSF1-206ENST00000583741 OR2B11Q5JQS5 317 aa15.94■□□□□ 0.14
SRSF1-206ENST00000583741 LGI3Q8N145 548 aa15.94■□□□□ 0.14
SRSF1-206ENST00000583741 MUC7Q8TAX7 377 aa15.94■□□□□ 0.14
SRSF1-206ENST00000583741 GON7Q9BXV9 100 aa15.94■□□□□ 0.14
SRSF1-206ENST00000583741 PLSCR3Q9NRY6 295 aa15.94■□□□□ 0.14
SRSF1-206ENST00000583741 ZNF256Q9Y2P7 627 aaPredicted RBP15.94■□□□□ 0.14
SRSF1-206ENST00000583741 PRELID3BQ9Y3B1 194 aa15.94■□□□□ 0.14
SRSF1-206ENST00000583741 CSMD3Q7Z407 3707 aa15.94■□□□□ 0.14
SRSF1-206ENST00000583741 STARD9Q9P2P6 4700 aa15.93■□□□□ 0.14
SRSF1-206ENST00000583741 GAPDHP04406 335 aaKnown RBP15.93■□□□□ 0.14
SRSF1-206ENST00000583741 TRAPPC2P0DI81 140 aa15.93■□□□□ 0.14
SRSF1-206ENST00000583741 TRAPPC2BP0DI82 140 aa15.93■□□□□ 0.14
SRSF1-206ENST00000583741 SPAG16Q8N0X2 631 aa15.93■□□□□ 0.14
SRSF1-206ENST00000583741 CHAC2Q8WUX2 184 aa15.93■□□□□ 0.14
SRSF1-206ENST00000583741 DDB2Q92466 427 aa15.93■□□□□ 0.14
SRSF1-206ENST00000583741 HSPB9Q9BQS6 159 aa15.93■□□□□ 0.14
SRSF1-206ENST00000583741 MRPL20Q9BYC9 149 aaKnown RBP15.93■□□□□ 0.14
SRSF1-206ENST00000583741 DNAH1Q9P2D7 4330 aa15.92■□□□□ 0.14
SRSF1-206ENST00000583741 TXNL1O43396 289 aa15.92■□□□□ 0.14
SRSF1-206ENST00000583741 CDS2O95674 445 aa15.92■□□□□ 0.14
SRSF1-206ENST00000583741 SULT1A3P0DMM9 295 aa15.92■□□□□ 0.14
SRSF1-206ENST00000583741 SULT1A4P0DMN0 295 aa15.92■□□□□ 0.14
SRSF1-206ENST00000583741 CT45A6P0DMU7 189 aa15.92■□□□□ 0.14
SRSF1-206ENST00000583741 CT45A5P0DMU8 189 aa15.92■□□□□ 0.14
SRSF1-206ENST00000583741 CT45A7P0DMV0 189 aa15.92■□□□□ 0.14
SRSF1-206ENST00000583741 LRTM2Q8N967 370 aa15.92■□□□□ 0.14
SRSF1-206ENST00000583741 ZNF383Q8NA42 475 aa15.92■□□□□ 0.14
SRSF1-206ENST00000583741 OR2T10Q8NGZ9 312 aa15.92■□□□□ 0.14
SRSF1-206ENST00000583741 LHFPL5Q8TAF8 219 aa15.92■□□□□ 0.14
SRSF1-206ENST00000583741 C4orf3Q8WVX3 66 aa15.92■□□□□ 0.14
SRSF1-206ENST00000583741 TMEM56Q96MV1 263 aa15.92■□□□□ 0.14
SRSF1-206ENST00000583741 FAM212BQ9NTI7 297 aaPredicted RBP15.92■□□□□ 0.14
SRSF1-206ENST00000583741 MGAT4CQ9UBM8 478 aa15.92■□□□□ 0.14
SRSF1-206ENST00000583741 TMEM56-RWDD3S4R434 201 aa15.92■□□□□ 0.14
SRSF1-206ENST00000583741 DBX1A6NMT0 343 aa15.91■□□□□ 0.14
SRSF1-206ENST00000583741 GOSR2O14653 212 aa15.91■□□□□ 0.14
SRSF1-206ENST00000583741 FCGR3BO75015 233 aa15.91■□□□□ 0.14
SRSF1-206ENST00000583741 IGHG4P01861 327 aa15.91■□□□□ 0.14
SRSF1-206ENST00000583741 KIR2DS2P43631 304 aa15.91■□□□□ 0.14
SRSF1-206ENST00000583741 ZNF585BQ52M93 769 aa15.91■□□□□ 0.14
SRSF1-206ENST00000583741 TMEM268Q5VZI3 342 aa15.91■□□□□ 0.14
SRSF1-206ENST00000583741 OR11H7Q8NGC8 314 aa15.91■□□□□ 0.14
SRSF1-206ENST00000583741 CD300LFQ8TDQ1 290 aa15.91■□□□□ 0.14
SRSF1-206ENST00000583741 NABP2Q9BQ15 211 aa15.91■□□□□ 0.14
SRSF1-206ENST00000583741 GAR1Q9NY12 217 aaKnown RBP15.91■□□□□ 0.14
SRSF1-206ENST00000583741 PIGBOS1A0A0B4J2F0 54 aa15.91■□□□□ 0.14
SRSF1-206ENST00000583741 RBFOX2O43251 390 aaKnown RBP eCLIP15.91■□□□□ 0.144e-10■■■■□ 23
SRSF1-206ENST00000583741 RPA2P15927 270 aa15.91■□□□□ 0.14
SRSF1-206ENST00000583741 LPAR6P43657 344 aa15.91■□□□□ 0.14
SRSF1-206ENST00000583741 BRWD1-AS2P59051 145 aa15.91■□□□□ 0.14
SRSF1-206ENST00000583741 FAM71E2Q8N5Q1 922 aa15.91■□□□□ 0.14
SRSF1-206ENST00000583741 OR11H1Q8NG94 326 aa15.91■□□□□ 0.14
SRSF1-206ENST00000583741 RBPMSQ93062 196 aaKnown RBP15.91■□□□□ 0.14
SRSF1-206ENST00000583741 IL22RA2Q969J5 263 aa15.91■□□□□ 0.14
SRSF1-206ENST00000583741 LY86O95711 162 aa15.9■□□□□ 0.14
SRSF1-206ENST00000583741 APOA2P02652 100 aa15.9■□□□□ 0.14
SRSF1-206ENST00000583741 CXCL3P19876 107 aa15.9■□□□□ 0.14
SRSF1-206ENST00000583741 PSMB8P28062 276 aa15.9■□□□□ 0.14
SRSF1-206ENST00000583741 TAGLNQ01995 201 aaKnown RBP15.9■□□□□ 0.14
SRSF1-206ENST00000583741 ASPHD1Q5U4P2 390 aa15.9■□□□□ 0.14
SRSF1-206ENST00000583741 SBSPONQ8IVN8 264 aa15.9■□□□□ 0.14
SRSF1-206ENST00000583741 SELENOHQ8IZQ5 122 aaKnown RBP15.9■□□□□ 0.14
SRSF1-206ENST00000583741 SLC35G3Q8N808 338 aa15.9■□□□□ 0.14
SRSF1-206ENST00000583741 OR4S2Q8NH73 311 aa15.9■□□□□ 0.14
SRSF1-206ENST00000583741 RCHY1Q96PM5 261 aa15.9■□□□□ 0.14
SRSF1-206ENST00000583741 SMAD5-AS1Q9Y6J3 95 aa15.9■□□□□ 0.14
SRSF1-206ENST00000583741 CCSO14618 274 aa15.89■□□□□ 0.13
SRSF1-206ENST00000583741 ADAP1O75689 374 aa15.89■□□□□ 0.13
SRSF1-206ENST00000583741 MOSP00540 346 aa15.89■□□□□ 0.13
SRSF1-206ENST00000583741 HOXB5P09067 269 aa15.89■□□□□ 0.13
SRSF1-206ENST00000583741 F2RL1P55085 397 aa15.89■□□□□ 0.13
SRSF1-206ENST00000583741 RTL8BQ17RB0 113 aa15.89■□□□□ 0.13
SRSF1-206ENST00000583741 OR5AN1Q8NGI8 311 aa15.89■□□□□ 0.13
SRSF1-206ENST00000583741 MYOZ3Q8TDC0 251 aa15.89■□□□□ 0.13
SRSF1-206ENST00000583741 RASL11BQ9BPW5 248 aa15.89■□□□□ 0.13
SRSF1-206ENST00000583741 SLC35D1Q9NTN3 355 aa15.89■□□□□ 0.13
SRSF1-206ENST00000583741 DUXBA0A1W2PPF3 345 aa15.88■□□□□ 0.13
SRSF1-206ENST00000583741 H0YJW9 148 aa15.88■□□□□ 0.13
SRSF1-206ENST00000583741 H7C2Y5 167 aa15.88■□□□□ 0.13
SRSF1-206ENST00000583741 PFDN1O60925 122 aa15.88■□□□□ 0.13
SRSF1-206ENST00000583741 S1PR2O95136 353 aa15.88■□□□□ 0.13
SRSF1-206ENST00000583741 IFNA21P01568 189 aa15.88■□□□□ 0.13
SRSF1-206ENST00000583741 IGKV1-39P01597 117 aa15.88■□□□□ 0.13
SRSF1-206ENST00000583741 IGKV1D-39P04432 117 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms