RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 PRR30Q53SZ7 412 aaPredicted RBP3.63□□□□□ -1.83
SS18-223ENST00000583595 ZC2HC1BQ5TFG8 222 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 TMEM205Q6UW68 189 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 MBOAT2Q6ZWT7 520 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 DEFB128Q7Z7B8 93 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 ZNF429Q86V71 674 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 BOD1L2Q8IYS8 172 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 TMEM61Q8N0U2 210 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 PNKDQ8N490 385 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 RNF175Q8N4F7 328 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 TMEM156Q8N614 296 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 ZNF615Q8N8J6 731 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 OR51A2Q8NGJ7 313 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 OR10G4Q8NGN3 311 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 OR6K2Q8NGY2 324 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 SYNPRQ8TBG9 265 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 OR51E1Q8TCB6 317 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 DNAJB3Q8WWF6 145 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 SEH1LQ96EE3 360 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 OR7D2Q96RA2 312 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 KIR2DL4Q99706 377 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 PYGO2Q9BRQ0 406 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 VAMP8Q9BV40 100 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 C19orf24Q9BVV8 132 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 CHST6Q9GZX3 395 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 COA1Q9GZY4 146 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 PORCNQ9H237 461 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 OR51I1Q9H343 314 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 ZNF702PQ9H963 129 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 WFDC1Q9HC57 220 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 NAT8Q9UHE5 227 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 MRPS16Q9Y3D3 137 aaKnown RBP3.63□□□□□ -1.83
SS18-223ENST00000583595 TBL2Q9Y4P3 447 aaKnown RBP3.63□□□□□ -1.83
SS18-223ENST00000583595 ALPK3Q96L96 1907 aa3.63□□□□□ -1.83
SS18-223ENST00000583595 TRAV8-7A0A075B6U6 113 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 A0A0A6YYD5 115 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 BORCS7-ASMTA0A0B4J1R7 106 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 A0A1W2PRS3 328 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 DAPL1A0PJW8 107 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 NKX2-6A6NCS4 301 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 ZNF860A6NHJ4 632 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 IFITM5A6NNB3 132 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 PIRO00625 290 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 FFAR1O14842 300 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 RBFOX2O43251 390 aaKnown RBP eCLIP3.62□□□□□ -1.83
SS18-223ENST00000583595 ENSAO43768 121 aaKnown RBP3.62□□□□□ -1.83
SS18-223ENST00000583595 YPEL1O60688 119 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 ALOX12BO75342 701 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 TIMP1P01033 207 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 HSPB1P04792 205 aaKnown RBP3.62□□□□□ -1.83
SS18-223ENST00000583595 SRP19P09132 144 aaKnown RBP3.62□□□□□ -1.83
SS18-223ENST00000583595 SMIM10L2AP0DMW4 78 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 SMIM10L2BP0DMW5 78 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 CDK2P24941 298 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 AK4P27144 223 aaPredicted RBP3.62□□□□□ -1.83
SS18-223ENST00000583595 HRH1P35367 487 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 GABRA2P47869 451 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 STC1P52823 247 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 RIPPLY3P57055 190 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 TPPP2P59282 170 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 S100A10P60903 97 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 CKS1BP61024 79 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 RPL31P62899 125 aaKnown RBP3.62□□□□□ -1.83
SS18-223ENST00000583595 BTN3A2P78410 334 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 HLA-DRB3P79483 266 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 KIAA0087Q14695 138 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 MMDQ15546 238 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 PLPPR5Q32ZL2 321 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 TCTEX1D4Q5JR98 221 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 FAM27D1Q5T7N8 215 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 RPL7L1Q6DKI1 246 aaKnown RBP3.62□□□□□ -1.83
SS18-223ENST00000583595 TOMM20LQ6UXN7 152 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 MRPL55Q7Z7F7 128 aaKnown RBP3.62□□□□□ -1.83
SS18-223ENST00000583595 DEFB106AQ8N104 65 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 OR52E2Q8NGJ4 325 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 OR4P4Q8NGL7 312 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 OR2T27Q8NH04 317 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 BTF3L4Q96K17 158 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 PGLYRP3Q96LB9 341 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 YPEL2Q96QA6 119 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 MED10Q9BTT4 135 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 SIGLEC7Q9Y286 467 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 ZSWIM8A7E2V4 1837 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 SIP14410 1827 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 PARP14Q460N5 1801 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 ANKRD36A6QL64 1941 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 COL4A1P02462 1669 aa3.62□□□□□ -1.83
SS18-223ENST00000583595 PAPPA2Q9BXP8 1791 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 SSC5DA1L4H1 1573 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 IGLV1-36A0A0B4J1U3 117 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 IGHV1-69-2A0A0G2JMI3 117 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 RBFOX3A6NFN3 312 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 OR51F1A6NGY5 319 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 OR11H12B2RN74 326 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 EEF1E1-BLOC1S5C9J1V9 151 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 KLRC4-KLRK1H3BQV0 150 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 M0QXV9 152 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 RCBTB2O95199 551 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 HLA-AP01891 365 aaKnown RBP3.61□□□□□ -1.83
SS18-223ENST00000583595 OR4Q2P0C623 313 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms