RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 SPIN2BQ9BPZ2 258 aa19.29■□□□□ 0.68
TSEN54-209ENST00000583454 TMEM140Q9NV12 185 aa19.29■□□□□ 0.68
TSEN54-209ENST00000583454 MARCH11A6NNE9 402 aa19.28■□□□□ 0.68
TSEN54-209ENST00000583454 H3BUA1 57 aa19.28■□□□□ 0.68
TSEN54-209ENST00000583454 UPK2O00526 184 aa19.28■□□□□ 0.68
TSEN54-209ENST00000583454 HLA-GP17693 338 aa19.28■□□□□ 0.68
TSEN54-209ENST00000583454 AP3S2P59780 193 aa19.28■□□□□ 0.68
TSEN54-209ENST00000583454 DMBX1Q8NFW5 382 aa19.28■□□□□ 0.68
TSEN54-209ENST00000583454 CASTOR1Q8WTX7 329 aa19.28■□□□□ 0.68
TSEN54-209ENST00000583454 RTBDNQ9BSG5 229 aaPredicted RBP19.28■□□□□ 0.68
TSEN54-209ENST00000583454 HRASLSQ9HDD0 168 aa19.28■□□□□ 0.68
TSEN54-209ENST00000583454 VSIG4Q9Y279 399 aa19.28■□□□□ 0.68
TSEN54-209ENST00000583454 TRAV3A0A0B4J244 114 aa19.27■□□□□ 0.68
TSEN54-209ENST00000583454 CD40LGP29965 261 aa19.27■□□□□ 0.68
TSEN54-209ENST00000583454 ERVK-16P61578 105 aa19.27■□□□□ 0.68
TSEN54-209ENST00000583454 RUNX1Q01196 453 aa19.27■□□□□ 0.68
TSEN54-209ENST00000583454 GDPD1Q8N9F7 314 aa19.27■□□□□ 0.68
TSEN54-209ENST00000583454 C4orf3Q8WVX3 66 aa19.27■□□□□ 0.68
TSEN54-209ENST00000583454 DEDD2Q8WXF8 326 aa19.27■□□□□ 0.68
TSEN54-209ENST00000583454 PHB2Q99623 299 aa19.27■□□□□ 0.68
TSEN54-209ENST00000583454 SLA2Q9H6Q3 261 aa19.27■□□□□ 0.68
TSEN54-209ENST00000583454 COPZ2Q9P299 210 aa19.27■□□□□ 0.68
TSEN54-209ENST00000583454 SCP2D1Q9UJQ7 156 aa19.27■□□□□ 0.68
TSEN54-209ENST00000583454 GPR132Q9UNW8 380 aa19.27■□□□□ 0.68
TSEN54-209ENST00000583454 A0A1B0GW64 132 aa19.26■□□□□ 0.67
TSEN54-209ENST00000583454 E7EUB6 86 aa19.26■□□□□ 0.67
TSEN54-209ENST00000583454 H0Y980 276 aa19.26■□□□□ 0.67
TSEN54-209ENST00000583454 KRASP01116 189 aa19.26■□□□□ 0.67
TSEN54-209ENST00000583454 RPA2P15927 270 aa19.26■□□□□ 0.67
TSEN54-209ENST00000583454 MYCNOSP40205 109 aa19.26■□□□□ 0.67
TSEN54-209ENST00000583454 RPL27AP46776 148 aaKnown RBP19.26■□□□□ 0.67
TSEN54-209ENST00000583454 C11orf87Q6NUJ2 197 aa19.26■□□□□ 0.67
TSEN54-209ENST00000583454 TOMM5Q8N4H5 51 aa19.26■□□□□ 0.67
TSEN54-209ENST00000583454 CCDC71LQ8N9Z2 235 aa19.26■□□□□ 0.67
TSEN54-209ENST00000583454 RAX2Q96IS3 184 aa19.26■□□□□ 0.67
TSEN54-209ENST00000583454 P2RX4Q99571 388 aa19.26■□□□□ 0.67
TSEN54-209ENST00000583454 GNB4Q9HAV0 340 aa19.26■□□□□ 0.67
TSEN54-209ENST00000583454 TEX22C9J3V5 150 aa19.25■□□□□ 0.67
TSEN54-209ENST00000583454 I3L521 148 aa19.25■□□□□ 0.67
TSEN54-209ENST00000583454 IGKV1-39P01597 117 aa19.25■□□□□ 0.67
TSEN54-209ENST00000583454 IGKV1D-39P04432 117 aa19.25■□□□□ 0.67
TSEN54-209ENST00000583454 OR9G9P0C7N8 305 aa19.25■□□□□ 0.67
TSEN54-209ENST00000583454 APELAP0DMC3 54 aa19.25■□□□□ 0.67
TSEN54-209ENST00000583454 FAUP35544 74 aaKnown RBP19.25■□□□□ 0.67
TSEN54-209ENST00000583454 ADAD2Q8NCV1 583 aaKnown RBP19.25■□□□□ 0.67
TSEN54-209ENST00000583454 SEC22AQ96IW7 307 aa19.25■□□□□ 0.67
TSEN54-209ENST00000583454 MS4A10Q96PG2 267 aa19.25■□□□□ 0.67
TSEN54-209ENST00000583454 C5orf66Q9H5L9 145 aa19.25■□□□□ 0.67
TSEN54-209ENST00000583454 MCUBQ9NWR8 336 aa19.25■□□□□ 0.67
TSEN54-209ENST00000583454 C3orf85A0A1B0GTC6 90 aa19.24■□□□□ 0.67
TSEN54-209ENST00000583454 CCL24O00175 119 aa19.24■□□□□ 0.67
TSEN54-209ENST00000583454 MYOD1P15172 320 aa19.24■□□□□ 0.67
TSEN54-209ENST00000583454 G6PCP35575 357 aa19.24■□□□□ 0.67
TSEN54-209ENST00000583454 TTC9CQ8N5M4 171 aa19.24■□□□□ 0.67
TSEN54-209ENST00000583454 TP53RKQ96S44 253 aa19.24■□□□□ 0.67
TSEN54-209ENST00000583454 SDHCQ99643 169 aaPredicted RBP19.24■□□□□ 0.67
TSEN54-209ENST00000583454 C14orf166Q9Y224 244 aaKnown RBP19.24■□□□□ 0.67
TSEN54-209ENST00000583454 CGB1A6NKQ9 187 aa19.23■□□□□ 0.67
TSEN54-209ENST00000583454 B3GALNT1O75752 331 aa19.23■□□□□ 0.67
TSEN54-209ENST00000583454 TRGV3P03979 118 aa19.23■□□□□ 0.67
TSEN54-209ENST00000583454 SERPINE2P07093 398 aa19.23■□□□□ 0.67
TSEN54-209ENST00000583454 TPPP2P59282 170 aa19.23■□□□□ 0.67
TSEN54-209ENST00000583454 OR2B8PP59922 312 aa19.23■□□□□ 0.67
TSEN54-209ENST00000583454 BAK1Q16611 211 aa19.23■□□□□ 0.67
TSEN54-209ENST00000583454 DEFB136Q30KP8 78 aa19.23■□□□□ 0.67
TSEN54-209ENST00000583454 CNPY1Q3B7I2 92 aa19.23■□□□□ 0.67
TSEN54-209ENST00000583454 ZNF355PQ9NSJ1 428 aa19.23■□□□□ 0.67
TSEN54-209ENST00000583454 HMX3A6NHT5 357 aa19.22■□□□□ 0.67
TSEN54-209ENST00000583454 ZNF45Q02386 682 aa19.22■□□□□ 0.67
TSEN54-209ENST00000583454 FHL3Q13643 280 aa19.22■□□□□ 0.67
TSEN54-209ENST00000583454 LINC00299Q6ZSB3 139 aa19.22■□□□□ 0.67
TSEN54-209ENST00000583454 SCGB3A2Q96PL1 93 aa19.22■□□□□ 0.67
TSEN54-209ENST00000583454 DUX3Q96PT4 197 aa19.22■□□□□ 0.67
TSEN54-209ENST00000583454 FYTTD1Q96QD9 318 aaKnown RBP19.22■□□□□ 0.67
TSEN54-209ENST00000583454 COMMD5Q9GZQ3 224 aa19.22■□□□□ 0.67
TSEN54-209ENST00000583454 COA4Q9NYJ1 87 aa19.22■□□□□ 0.67
TSEN54-209ENST00000583454 UCP1P25874 307 aa19.21■□□□□ 0.67
TSEN54-209ENST00000583454 SLC25A42Q86VD7 318 aa19.21■□□□□ 0.67
TSEN54-209ENST00000583454 GPR61Q9BZJ8 451 aa19.21■□□□□ 0.67
TSEN54-209ENST00000583454 BATF3Q9NR55 127 aa19.21■□□□□ 0.67
TSEN54-209ENST00000583454 STAB2Q8WWQ8 2551 aa19.2■□□□□ 0.66
TSEN54-209ENST00000583454 NPIPB5A8MRT5 1133 aa19.2■□□□□ 0.66
TSEN54-209ENST00000583454 SP6Q3SY56 376 aa19.2■□□□□ 0.66
TSEN54-209ENST00000583454 DEFB121Q5J5C9 76 aa19.2■□□□□ 0.66
TSEN54-209ENST00000583454 OR5B12Q96R08 314 aa19.2■□□□□ 0.66
TSEN54-209ENST00000583454 TSC22D3Q99576 134 aa19.2■□□□□ 0.66
TSEN54-209ENST00000583454 SRSF8Q9BRL6 282 aaKnown RBP19.2■□□□□ 0.66
TSEN54-209ENST00000583454 NAA60Q9H7X0 242 aa19.2■□□□□ 0.66
TSEN54-209ENST00000583454 ZNF257Q9Y2Q1 563 aa19.2■□□□□ 0.66
TSEN54-209ENST00000583454 TEX50A0A1B0GTY4 177 aa19.19■□□□□ 0.66
TSEN54-209ENST00000583454 CRYM-AS1A6NIL9 109 aa19.19■□□□□ 0.66
TSEN54-209ENST00000583454 SNAPC5O75971 98 aa19.19■□□□□ 0.66
TSEN54-209ENST00000583454 CRYGCP07315 174 aa19.19■□□□□ 0.66
TSEN54-209ENST00000583454 LGALS1P09382 135 aaKnown RBP19.19■□□□□ 0.66
TSEN54-209ENST00000583454 ZNF57Q68EA5 555 aaPredicted RBP19.19■□□□□ 0.66
TSEN54-209ENST00000583454 OR11H1Q8NG94 326 aa19.19■□□□□ 0.66
TSEN54-209ENST00000583454 TMEM222Q9H0R3 208 aa19.19■□□□□ 0.66
TSEN54-209ENST00000583454 TRBV9A0A0B4J1U6 114 aa19.18■□□□□ 0.66
TSEN54-209ENST00000583454 A0A0G2JLM5 398 aa19.18■□□□□ 0.66
TSEN54-209ENST00000583454 TEX13DA0A0J9YY54 714 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms