RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 RNF224P0DH78 156 aa13.85□□□□□ -0.19
ERBB2-214ENST00000583038 CCL1P22362 96 aa13.85□□□□□ -0.19
ERBB2-214ENST00000583038 SLC25A34Q6PIV7 304 aa13.85□□□□□ -0.19
ERBB2-214ENST00000583038 VKORC1L1Q8N0U8 176 aa13.85□□□□□ -0.19
ERBB2-214ENST00000583038 LINC00312Q9Y6C7 94 aa13.85□□□□□ -0.19
ERBB2-214ENST00000583038 RAB37Q96AX2 223 aa13.85□□□□□ -0.19
ERBB2-214ENST00000583038 SPTBN2O15020 2390 aa13.85□□□□□ -0.19
ERBB2-214ENST00000583038 PQLC2LA1A4F0 135 aa13.85□□□□□ -0.19
ERBB2-214ENST00000583038 GPX1P07203 203 aa13.85□□□□□ -0.19
ERBB2-214ENST00000583038 SNRPD3P62318 126 aaKnown RBP13.85□□□□□ -0.19
ERBB2-214ENST00000583038 SPATA45Q537H7 98 aa13.85□□□□□ -0.19
ERBB2-214ENST00000583038 GOLT1AQ6ZVE7 132 aa13.85□□□□□ -0.19
ERBB2-214ENST00000583038 NUDT3O95989 172 aa13.85□□□□□ -0.19
ERBB2-214ENST00000583038 NBEAP1P0C6P0 100 aa13.85□□□□□ -0.19
ERBB2-214ENST00000583038 FHITP49789 147 aa13.85□□□□□ -0.19
ERBB2-214ENST00000583038 RPL39P5Q59GN2 51 aa13.85□□□□□ -0.19
ERBB2-214ENST00000583038 CENPWQ5EE01 88 aa13.85□□□□□ -0.19
ERBB2-214ENST00000583038 RNASEH2CQ8TDP1 164 aaKnown RBP13.85□□□□□ -0.19
ERBB2-214ENST00000583038 RTBDNQ9BSG5 229 aaPredicted RBP13.85□□□□□ -0.19
ERBB2-214ENST00000583038 AKIRIN1Q9H9L7 192 aaPredicted RBP13.85□□□□□ -0.19
ERBB2-214ENST00000583038 ACSF3Q4G176 576 aaPredicted RBP13.84□□□□□ -0.19
ERBB2-214ENST00000583038 PLXNA1Q9UIW2 1896 aa13.84□□□□□ -0.19
ERBB2-214ENST00000583038 UMODP07911 640 aa13.84□□□□□ -0.19
ERBB2-214ENST00000583038 LINC00271P0C7V0 271 aa13.84□□□□□ -0.19
ERBB2-214ENST00000583038 FAM27E3Q08E93 113 aa13.84□□□□□ -0.19
ERBB2-214ENST00000583038 EAF1Q96JC9 268 aaPredicted RBP13.84□□□□□ -0.19
ERBB2-214ENST00000583038 GPR61Q9BZJ8 451 aa13.84□□□□□ -0.19
ERBB2-214ENST00000583038 ANKRD36A6QL64 1941 aa13.84□□□□□ -0.19
ERBB2-214ENST00000583038 BRCA1P38398 1863 aaKnown RBP13.84□□□□□ -0.19
ERBB2-214ENST00000583038 ABCA7Q8IZY2 2146 aa13.84□□□□□ -0.19
ERBB2-214ENST00000583038 HBBP68871 147 aa13.84□□□□□ -0.19
ERBB2-214ENST00000583038 LINC00305Q7Z4B0 112 aa13.84□□□□□ -0.19
ERBB2-214ENST00000583038 OR10S1Q8NGN2 331 aa13.84□□□□□ -0.19
ERBB2-214ENST00000583038 SBF2Q86WG5 1849 aa13.84□□□□□ -0.19
ERBB2-214ENST00000583038 FBLL1A6NHQ2 334 aaKnown RBP13.83□□□□□ -0.19
ERBB2-214ENST00000583038 MSGN1A6NI15 193 aa13.83□□□□□ -0.19
ERBB2-214ENST00000583038 ZNF362Q5T0B9 420 aaPredicted RBP13.83□□□□□ -0.19
ERBB2-214ENST00000583038 SPTBN1Q01082 2364 aaKnown RBP13.83□□□□□ -0.2
ERBB2-214ENST00000583038 TRBV6-7A0A0A0MS04 114 aa13.83□□□□□ -0.2
ERBB2-214ENST00000583038 RRHO14718 337 aa13.83□□□□□ -0.2
ERBB2-214ENST00000583038 PPP1R17O96001 155 aa13.83□□□□□ -0.2
ERBB2-214ENST00000583038 PSMG4Q5JS54 123 aa13.83□□□□□ -0.2
ERBB2-214ENST00000583038 ZNF385CQ66K41 422 aaPredicted RBP13.83□□□□□ -0.2
ERBB2-214ENST00000583038 OR4A47Q6IF82 309 aa13.83□□□□□ -0.2
ERBB2-214ENST00000583038 OR13A1Q8NGR1 328 aa13.83□□□□□ -0.2
ERBB2-214ENST00000583038 FLVCR1-AS1Q8TAF5 88 aa13.83□□□□□ -0.2
ERBB2-214ENST00000583038 KIR2DL4Q99706 377 aa13.83□□□□□ -0.2
ERBB2-214ENST00000583038 SOX21Q9Y651 276 aaPredicted RBP13.83□□□□□ -0.2
ERBB2-214ENST00000583038 TRAV9-1A0A075B6T8 112 aa13.83□□□□□ -0.2
ERBB2-214ENST00000583038 A0A0G2JLM5 398 aa13.83□□□□□ -0.2
ERBB2-214ENST00000583038 REG1AP05451 166 aa13.83□□□□□ -0.2
ERBB2-214ENST00000583038 WDYHV1Q96HA8 205 aa13.83□□□□□ -0.2
ERBB2-214ENST00000583038 DLX6P56179 175 aa13.83□□□□□ -0.2
ERBB2-214ENST00000583038 WBP1Q96G27 269 aa13.83□□□□□ -0.2
ERBB2-214ENST00000583038 PMCHL2Q9BQD1 86 aa13.83□□□□□ -0.2
ERBB2-214ENST00000583038 CHODLQ9H9P2 273 aa13.83□□□□□ -0.2
ERBB2-214ENST00000583038 PRDM6Q9NQX0 595 aa13.83□□□□□ -0.2
ERBB2-214ENST00000583038 ATXN7O15265 892 aaPredicted RBP13.82□□□□□ -0.2
ERBB2-214ENST00000583038 FABP2P12104 132 aa13.82□□□□□ -0.2
ERBB2-214ENST00000583038 UBE2L6O14933 153 aa13.82□□□□□ -0.2
ERBB2-214ENST00000583038 CSRP1P21291 193 aaKnown RBP13.82□□□□□ -0.2
ERBB2-214ENST00000583038 IGHV1-2P23083 117 aa13.82□□□□□ -0.2
ERBB2-214ENST00000583038 EFNB1P98172 346 aa13.82□□□□□ -0.2
ERBB2-214ENST00000583038 HERPUD1Q15011 391 aa13.82□□□□□ -0.2
ERBB2-214ENST00000583038 C17orf100A8MU93 164 aa13.82□□□□□ -0.2
ERBB2-214ENST00000583038 C17orf98A8MV24 154 aa13.82□□□□□ -0.2
ERBB2-214ENST00000583038 C9orf172C9J069 976 aa13.82□□□□□ -0.2
ERBB2-214ENST00000583038 ZNF256Q9Y2P7 627 aaPredicted RBP13.82□□□□□ -0.2
ERBB2-214ENST00000583038 MPZP25189 248 aa13.82□□□□□ -0.2
ERBB2-214ENST00000583038 LHX2P50458 406 aa13.82□□□□□ -0.2
ERBB2-214ENST00000583038 FAM89BQ8N5H3 189 aa13.82□□□□□ -0.2
ERBB2-214ENST00000583038 SMIM12Q96EX1 92 aa13.82□□□□□ -0.2
ERBB2-214ENST00000583038 GPR82Q96P67 336 aa13.82□□□□□ -0.2
ERBB2-214ENST00000583038 RBFOX2O43251 390 aaKnown RBP eCLIP13.81□□□□□ -0.21e-6■■■■□ 19.5
ERBB2-214ENST00000583038 Q6AWC8 147 aa13.81□□□□□ -0.2
ERBB2-214ENST00000583038 YPEL1O60688 119 aa13.81□□□□□ -0.2
ERBB2-214ENST00000583038 LYPD3O95274 346 aa13.81□□□□□ -0.2
ERBB2-214ENST00000583038 FAM159AQ6UWV7 190 aa13.81□□□□□ -0.2
ERBB2-214ENST00000583038 LINC01560Q8TB33 94 aa13.81□□□□□ -0.2
ERBB2-214ENST00000583038 FAM131CQ96AQ9 280 aa13.81□□□□□ -0.2
ERBB2-214ENST00000583038 YPEL2Q96QA6 119 aa13.81□□□□□ -0.2
ERBB2-214ENST00000583038 CGB1A6NKQ9 187 aa13.81□□□□□ -0.2
ERBB2-214ENST00000583038 DDTP30046 118 aa13.81□□□□□ -0.2
ERBB2-214ENST00000583038 CIRBPQ14011 172 aaKnown RBP13.81□□□□□ -0.2
ERBB2-214ENST00000583038 SCN2AQ99250 2005 aa13.81□□□□□ -0.2
ERBB2-214ENST00000583038 A0A1B0GW15 77 aa13.81□□□□□ -0.2
ERBB2-214ENST00000583038 RNF222A6NCQ9 220 aa13.81□□□□□ -0.2
ERBB2-214ENST00000583038 GAGE10A6NGK3 116 aa13.81□□□□□ -0.2
ERBB2-214ENST00000583038 ZFP36L1Q07352 338 aaKnown RBP13.81□□□□□ -0.2
ERBB2-214ENST00000583038 SAMD13Q5VXD3 122 aa13.81□□□□□ -0.2
ERBB2-214ENST00000583038 FAM216BQ8N7L0 139 aa13.81□□□□□ -0.2
ERBB2-214ENST00000583038 A8MXK9 166 aa13.8□□□□□ -0.2
ERBB2-214ENST00000583038 EFEMP2O95967 443 aa13.8□□□□□ -0.2
ERBB2-214ENST00000583038 MOSP00540 346 aa13.8□□□□□ -0.2
ERBB2-214ENST00000583038 TAS2R60P59551 318 aa13.8□□□□□ -0.2
ERBB2-214ENST00000583038 SSBP3Q9BWW4 388 aaPredicted RBP13.8□□□□□ -0.2
ERBB2-214ENST00000583038 C21orf62Q9NYP8 219 aa13.8□□□□□ -0.2
ERBB2-214ENST00000583038 BRWD3Q6RI45 1802 aa13.8□□□□□ -0.2
ERBB2-214ENST00000583038 RALGAPA2Q2PPJ7 1873 aa13.8□□□□□ -0.2
ERBB2-214ENST00000583038 SRP19P09132 144 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms