RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 TAF15Q92804 592 aaKnown RBP eCLIP7.54□□□□□ -1.2
RFFL-210ENST00000582308 QTRT1Q9BXR0 403 aaKnown RBP7.54□□□□□ -1.2
RFFL-210ENST00000582308 NPFFR1Q9GZQ6 430 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 MED28Q9H204 178 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 ZNF702PQ9H963 129 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.54□□□□□ -1.2
RFFL-210ENST00000582308 MGAT4CQ9UBM8 478 aa7.54□□□□□ -1.2
RFFL-210ENST00000582308 FOXA2Q9Y261 457 aaPredicted RBP7.54□□□□□ -1.2
RFFL-210ENST00000582308 C5orf51A6NDU8 294 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 CGB1A6NKQ9 187 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 FAM25EA8MYX2 175 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 TRIM77I1YAP6 450 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 ST8SIA3O43173 380 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 IGHG2P01859 326 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 OPN1MWP04001 364 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 FGF2P09038 288 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 OPN1MW2P0DN77 364 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 OPN1MW3P0DN78 364 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 EGR2P11161 476 aaPredicted RBP7.53□□□□□ -1.2
RFFL-210ENST00000582308 CXCL3P19876 107 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 MAS1LP35410 378 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 COMPP49747 757 aaPredicted RBP7.53□□□□□ -1.2
RFFL-210ENST00000582308 H2BFSP57053 126 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 GNB1P62873 340 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 FXYD3Q14802 87 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 TNXAQ16473 311 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 IAH1Q2TAA2 248 aaPredicted RBP7.53□□□□□ -1.2
RFFL-210ENST00000582308 AARDQ4LEZ3 155 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 CXorf66Q5JRM2 361 aaPredicted RBP7.53□□□□□ -1.2
RFFL-210ENST00000582308 C9orf152Q5JTZ5 239 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 GSG1LQ6UXU4 331 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 ZNF429Q86V71 674 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 OR11H7Q8NGC8 314 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 OR5M8Q8NGP6 311 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 WDR89Q96FK6 387 aaPredicted RBP7.53□□□□□ -1.2
RFFL-210ENST00000582308 C2orf50Q96LR7 162 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 PRSS22Q9GZN4 317 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 COA4Q9NYJ1 87 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 FKBP11Q9NYL4 201 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 PRNDQ9UKY0 176 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 FBXO7Q9Y3I1 522 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 OR51B2Q9Y5P1 312 aa7.53□□□□□ -1.2
RFFL-210ENST00000582308 ATRQ13535 2644 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 hCG_2014768A0A024R1R8 64 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 RBMXL2O75526 392 aaKnown RBP7.52□□□□□ -1.21
RFFL-210ENST00000582308 ACTL6BO94805 426 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 NXPH3O95157 252 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 CNIH1O95406 144 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 RPL27AP46776 148 aaKnown RBP7.52□□□□□ -1.21
RFFL-210ENST00000582308 RPL15P61313 204 aaKnown RBP7.52□□□□□ -1.21
RFFL-210ENST00000582308 HSPE1P61604 102 aaKnown RBP7.52□□□□□ -1.21
RFFL-210ENST00000582308 IL15RAQ13261 267 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 TMEM95Q3KNT9 176 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 THOC7Q6I9Y2 204 aaKnown RBP7.52□□□□□ -1.21
RFFL-210ENST00000582308 Q6ZSV7 163 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 PRIMA1Q86XR5 153 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 LURAP1LQ8IV03 231 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 Q8N2B8 174 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 ZBTB8BQ8NAP8 495 aaPredicted RBP7.52□□□□□ -1.21
RFFL-210ENST00000582308 OR4D5Q8NGN0 318 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 OR1L8Q8NGR8 309 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 OR1S1Q8NH92 325 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 GRPEL2Q8TAA5 225 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 SRSF12Q8WXF0 261 aaKnown RBP7.52□□□□□ -1.21
RFFL-210ENST00000582308 ARPC1AQ92747 370 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 SPIN2AQ99865 258 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 SPIN2BQ9BPZ2 258 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 COMMD5Q9GZQ3 224 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 NDUFA4L2Q9NRX3 87 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 GSKIPQ9P0R6 139 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 ZNF257Q9Y2Q1 563 aa7.52□□□□□ -1.21
RFFL-210ENST00000582308 HMX3A6NHT5 357 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 MSGN1A6NI15 193 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 TEX22C9J3V5 150 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 ATP6V0E1O15342 81 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 TSPAN9O75954 239 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 IFNA17P01571 189 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 CRYBA1P05813 215 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 TRAPPC2P0DI81 140 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 TRAPPC2BP0DI82 140 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 SPCS3P61009 180 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 TNFRSF9Q07011 255 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 SRSF4Q08170 494 aaKnown RBP7.51□□□□□ -1.21
RFFL-210ENST00000582308 PDLIM3Q53GG5 364 aaPredicted RBP7.51□□□□□ -1.21
RFFL-210ENST00000582308 SPINK9Q5DT21 86 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 C11orf87Q6NUJ2 197 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 SLC35E3Q7Z769 313 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 OR10W1Q8NGF6 305 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 OR5B3Q8NH48 314 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 OR52E5Q8NH55 327 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 CHAC2Q8WUX2 184 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 FYTTD1Q96QD9 318 aaKnown RBP7.51□□□□□ -1.21
RFFL-210ENST00000582308 FAM103A1Q9BTL3 118 aaKnown RBP7.51□□□□□ -1.21
RFFL-210ENST00000582308 HINT2Q9BX68 163 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 PARP11Q9NR21 331 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 HSPB7Q9UBY9 170 aa7.51□□□□□ -1.21
RFFL-210ENST00000582308 IGLC7A0M8Q6 106 aa7.5□□□□□ -1.21
RFFL-210ENST00000582308 FAM90A26D6RGX4 464 aa7.5□□□□□ -1.21
RFFL-210ENST00000582308 KCNAB3O43448 404 aa7.5□□□□□ -1.21
RFFL-210ENST00000582308 NDUFA7O95182 113 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms