RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 GPR146Q96CH1 333 aa11.32□□□□□ -0.6
SKA2-205ENST00000580541 SRSF8Q9BRL6 282 aaKnown RBP11.32□□□□□ -0.6
SKA2-205ENST00000580541 PRR13Q9NZ81 148 aa11.32□□□□□ -0.6
SKA2-205ENST00000580541 FOXA2Q9Y261 457 aaPredicted RBP11.32□□□□□ -0.6
SKA2-205ENST00000580541 OR51B2Q9Y5P1 312 aa11.32□□□□□ -0.6
SKA2-205ENST00000580541 IGHV7-81A0A0B4J1V7 117 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 C5orf51A6NDU8 294 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 DBX1A6NMT0 343 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 C15orf61A6NNL5 157 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 IFNA17P01571 189 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 P0C879 139 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 TRAPPC2P0DI81 140 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 TRAPPC2BP0DI82 140 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 HKR1P10072 659 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 VDAC2P45880 294 aaPredicted RBP11.31□□□□□ -0.6
SKA2-205ENST00000580541 RPL27AP46776 148 aaKnown RBP11.31□□□□□ -0.6
SKA2-205ENST00000580541 HSPE1P61604 102 aaKnown RBP11.31□□□□□ -0.6
SKA2-205ENST00000580541 CYCSP99999 105 aaKnown RBP11.31□□□□□ -0.6
SKA2-205ENST00000580541 PJVKQ0ZLH3 352 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 FOXL1Q12952 345 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 GSG1LQ6UXU4 331 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 Q6ZSV7 163 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 OR52E5Q8NH55 327 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 OR1S1Q8NH92 325 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 SGMS2Q8NHU3 365 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 RBMXL1Q96E39 390 aaKnown RBP11.31□□□□□ -0.6
SKA2-205ENST00000580541 MED28Q9H204 178 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 ENY2Q9NPA8 101 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 TMEM14BQ9NUH8 114 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 CACNG5Q9UF02 275 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 ZNF580Q9UK33 172 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 ALG5Q9Y673 324 aa11.31□□□□□ -0.6
SKA2-205ENST00000580541 PLXNB1O43157 2135 aa11.3□□□□□ -0.6
SKA2-205ENST00000580541 A0A0B4J293 547 aa11.3□□□□□ -0.6
SKA2-205ENST00000580541 C13orf42A0A1B0GVH6 325 aa11.3□□□□□ -0.6
SKA2-205ENST00000580541 A0A1W2PN81 502 aa11.3□□□□□ -0.6
SKA2-205ENST00000580541 FAM90A26D6RGX4 464 aa11.3□□□□□ -0.6
SKA2-205ENST00000580541 MED6O75586 246 aa11.3□□□□□ -0.6
SKA2-205ENST00000580541 LY86O95711 162 aa11.3□□□□□ -0.6
SKA2-205ENST00000580541 IGF1P05019 195 aa11.3□□□□□ -0.6
SKA2-205ENST00000580541 OR9G9P0C7N8 305 aa11.3□□□□□ -0.6
SKA2-205ENST00000580541 CHRNA7P36544 502 aa11.3□□□□□ -0.6
SKA2-205ENST00000580541 SPCS3P61009 180 aa11.3□□□□□ -0.6
SKA2-205ENST00000580541 SLC35B1P78383 322 aa11.3□□□□□ -0.6
SKA2-205ENST00000580541 AKIRIN2Q53H80 203 aa11.3□□□□□ -0.6
SKA2-205ENST00000580541 SRSF12Q8WXF0 261 aaKnown RBP11.3□□□□□ -0.6
SKA2-205ENST00000580541 TMEM158Q8WZ71 300 aa11.3□□□□□ -0.6
SKA2-205ENST00000580541 QTRT1Q9BXR0 403 aaKnown RBP11.3□□□□□ -0.6
SKA2-205ENST00000580541 ZNF702PQ9H963 129 aa11.3□□□□□ -0.6
SKA2-205ENST00000580541 PARP11Q9NR21 331 aa11.3□□□□□ -0.6
SKA2-205ENST00000580541 TPSG1Q9NRR2 321 aa11.3□□□□□ -0.6
SKA2-205ENST00000580541 ZFP57Q9NU63 452 aa11.3□□□□□ -0.6
SKA2-205ENST00000580541 NSG2Q9Y328 171 aa11.3□□□□□ -0.6
SKA2-205ENST00000580541 TRAV3A0A0B4J244 114 aa11.29□□□□□ -0.6
SKA2-205ENST00000580541 TEX50A0A1B0GTY4 177 aa11.29□□□□□ -0.6
SKA2-205ENST00000580541 MSGN1A6NI15 193 aa11.29□□□□□ -0.6
SKA2-205ENST00000580541 FAM25EA8MYX2 175 aa11.29□□□□□ -0.6
SKA2-205ENST00000580541 CYB5BO43169 146 aa11.29□□□□□ -0.6
SKA2-205ENST00000580541 ERHP84090 104 aaKnown RBP11.29□□□□□ -0.6
SKA2-205ENST00000580541 IAH1Q2TAA2 248 aaPredicted RBP11.29□□□□□ -0.6
SKA2-205ENST00000580541 CENPVQ7Z7K6 275 aaPredicted RBP11.29□□□□□ -0.6
SKA2-205ENST00000580541 GRPEL2Q8TAA5 225 aa11.29□□□□□ -0.6
SKA2-205ENST00000580541 C2orf50Q96LR7 162 aa11.29□□□□□ -0.6
SKA2-205ENST00000580541 FYTTD1Q96QD9 318 aaKnown RBP11.29□□□□□ -0.6
SKA2-205ENST00000580541 HSPB9Q9BQS6 159 aa11.29□□□□□ -0.6
SKA2-205ENST00000580541 ZFHX3Q15911 3703 aa11.29□□□□□ -0.6
SKA2-205ENST00000580541 CLPSL1A2RUU4 121 aa11.28□□□□□ -0.6
SKA2-205ENST00000580541 SH2D7A6NKC9 451 aaPredicted RBP11.28□□□□□ -0.6
SKA2-205ENST00000580541 ADAP1O75689 374 aa11.28□□□□□ -0.6
SKA2-205ENST00000580541 CRIP2P52943 208 aaPredicted RBP11.28□□□□□ -0.6
SKA2-205ENST00000580541 OR2B8PP59922 312 aa11.28□□□□□ -0.6
SKA2-205ENST00000580541 AARDQ4LEZ3 155 aa11.28□□□□□ -0.6
SKA2-205ENST00000580541 Q6ZRM9 215 aa11.28□□□□□ -0.6
SKA2-205ENST00000580541 HINT2Q9BX68 163 aa11.28□□□□□ -0.6
SKA2-205ENST00000580541 HIPK2Q9H2X6 1198 aa11.28□□□□□ -0.6
SKA2-205ENST00000580541 NDUFA4L2Q9NRX3 87 aa11.28□□□□□ -0.6
SKA2-205ENST00000580541 GSKIPQ9P0R6 139 aa11.28□□□□□ -0.6
SKA2-205ENST00000580541 TRAV41A0A0B4J266 112 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 A0A0G2JRQ6 117 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 WRBO00258 174 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 ATP6V0E1O15342 81 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 ST8SIA3O43173 380 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 OPN1MWP04001 364 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 OPN1MW2P0DN77 364 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 OPN1MW3P0DN78 364 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 SUB1P53999 127 aaKnown RBP eCLIP11.27□□□□□ -0.61
SKA2-205ENST00000580541 RIPPLY3P57055 190 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 PRCDQ00LT1 54 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 IZUMO4Q1ZYL8 232 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 MRGPRG-AS1Q2M3A8 158 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 PDLIM3Q53GG5 364 aaPredicted RBP11.27□□□□□ -0.61
SKA2-205ENST00000580541 UNQ5815/PRO19632Q6UWF5 114 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 NOXA1Q86UR1 476 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 PRIMA1Q86XR5 153 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 STPG2Q8N412 459 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 COMMD1Q8N668 190 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 OR5M8Q8NGP6 311 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 OR1L6Q8NGR2 347 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 LINC01006Q8NI28 216 aa11.27□□□□□ -0.61
SKA2-205ENST00000580541 ASB13Q8WXK3 278 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms